Data collection: DBD

General information

Recommended name DBD
Alternative name(s)
  • Transcription Factor Database
Description The DBD (transcription factor database) provides genome-wide transcription factor predictions for organisms across the tree of life. The prediction method identifies sequence-specific DNA-binding transcription factors through homology using profile hidden Markov models (HMMs) of domains from Pfam and SUPERFAMILY. It does not include basal transcription factors or chromatin-associated proteins.
Identifier pattern^\d+$
Registry identifierMIR:00000455

Identification schemes

Namespace dbd
Alternative URI schemes  

Physical locations (resources)

Description DBD at MRC Laboratory of Molecular Biology
Access URLs HTML   (using the example identifier: 0045310)
Institution MRC Laboratory of Molecular Biology, Cambridge, UK