Data collection: OMA Protein

protein clustering

General information

Recommended name OMA Protein Collection has restriction(s) logo
Alternative name(s)
  • Orthologous MAtrix
Description OMA (Orthologous MAtrix) is a database that identifies orthologs among publicly available, complete genome sequences. It identifies orthologous relationships which can be accessed either group-wise, where all group members are orthologous to all other group members, or on a sequence-centric basis, where for a given protein all its orthologs in all other species are displayed. This collection references individual protein records.
Identifier pattern^[A-Z0-9]{5}\d+$
Registry identifierMIR:00000342

Identification schemes

Namespace oma.protein
Alternative URI schemes  

Physical locations (resources)

Description OMA Protein through OMA browser at ETH Zurich
Access URLs HTML   (using the example identifier: HUMAN16963)
Institution ETH Zurich, Computer Science, Zurich, Switzerland