Data collection: Sequence Ontology

ontology DNA

General information

Recommended name Sequence Ontology
Alternative name(s)
  • SO
  • Sequence Types and Features
Description The Sequence Ontology (SO) is a structured controlled vocabulary for the parts of a genomic annotation. It provides a common set of terms and definitions to facilitate the exchange, analysis and management of genomic data.
Identifier pattern^SO:\d{7}$
Registry identifierMIR:00000081

Identification schemes

Namespace so
URI http://identifiers.org/so/
Alternative URI schemes  
Deprecated URI scheme(s)   Display/Hide deprecated URI scheme(s)

Physical locations (resources)

Resource
MIR:00100628
Description Sequence Ontology through Ontology Lookup Service (OLS)
Access URLs HTML   (using the example identifier: SO:0000704)
Institution European Bioinformatics Institute, Hinxton, Cambridge, UK
Website http://www.ebi.ac.uk/ols/ontologies/so
Resource
MIR:00100112
Description Sequence Ontology
Access URLs HTML   (using the example identifier: SO:0000704)
Institution Department of Molecular and Cellular Biology, University of California, Berkeley, USA
Website http://www.sequenceontology.org/
Resource
MIR:00100241
Description Sequence Ontology through BioPortal
Access URLs HTML   (using the example identifier: SO:0000704)
Institution National Center for Biomedical Ontology, Stanford, USA
Website http://bioportal.bioontology.org/ontologies/SO

References