1. Introduction

2. impc_images

2.1. Fields

Path Type Description

id

String

The unique identifier for the experiment.

observation_id

String

The observation ID associated with this experiment.

specimen_id

String

The specimen ID related to this experiment.

phenotyping_center_id

Number

The ID of the phenotyping center where the experiment was conducted.

phenotyping_center

String

The name of the phenotyping center.

production_center_id

Number

The ID of the production center related to the specimen.

production_center

String

The name of the production center.

specimen_project_id

Number

The project ID associated with the specimen.

specimen_project_name

String

The name of the project associated with the specimen.

gene_accession_id

String

The accession ID for the gene of interest.

gene_symbol

String

The symbol representing the gene of interest.

allele_accession_id

String

The accession ID for the allele of interest.

allele_symbol

String

The symbol for the allele of interest.

zygosity

String

The zygosity of the specimen.

sex

String

The sex of the specimen.

biological_model_id

Number

The ID of the biological model used.

biological_sample_id

Number

The ID of the biological sample.

biological_sample_group

String

The group classification of the biological sample.

strain_accession_id

String

The accession ID for the strain.

strain_name

String

The name of the strain.

genetic_background

String

The genetic background of the specimen.

allelic_composition

String

The allelic composition of the specimen.

colony_id

String

The ID of the colony from which the specimen originates.

litter_id

String

The ID of the litter from which the specimen originates.

date_of_birth

String

The date of birth of the specimen.

external_sample_id

String

An external identifier for the sample.

life_stage_name

String

The life stage of the specimen.

life_stage_acc

String

The accession number associated with the life stage.

datasource_id

Number

The ID of the data source.

datasource_name

String

The name of the data source.

project_id

Number

The project ID.

project_name

String

The name of the project.

pipeline_id

Number

The pipeline ID.

pipeline_name

String

The name of the pipeline.

pipeline_stable_id

String

The stable ID of the pipeline.

procedure_id

Number

The procedure ID.

procedure_name

String

The name of the procedure.

procedure_stable_id

String

The stable ID of the procedure.

procedure_group

String

The procedure group.

parameter_id

Number

The parameter ID.

parameter_name

String

The name of the parameter.

parameter_stable_id

String

The stable ID of the parameter.

procedure_sequence_id

String

The procedure sequence ID.

experiment_id

String

The experiment ID.

observation_type

String

The type of observation.

data_type

String

The type of data.

experiment_source_id

String

The source ID of the experiment.

date_of_experiment

String

The date the experiment was conducted.

weight_parameter_stable_id

String

The stable ID for the weight parameter.

weight_date

String

The date of the weight measurement.

weight_days_old

Number

The age of the specimen in days at the time of the weight measurement.

weight

Number

The weight of the specimen.

data_point

Number

A data point associated with the experiment.

order_index

Number

The order index.

dimension

String

The dimension of the data point.

time_point

String

The time point at which the data was collected.

discrete_point

Number

A discrete data point.

category

String

The category of the data.

raw_category

String

The raw category of the data.

metadata

Array

Metadata associated with the experiment.

metadata_group

String

The group of the metadata.

mp_id

Array

The MP IDs associated with the experiment.

mp_term

Array

The MP terms associated with the experiment.

anatomy_id

Array

The anatomy IDs related to the experiment.

anatomy_term

Array

The anatomy terms related to the experiment.

anatomy_id_term

Array

Combined anatomy ID and term related to the experiment.

anatomy_term_synonym

Array

Synonyms for the anatomy terms.

top_level_anatomy_id

Array

Top-level anatomy IDs related to the experiment.

top_level_anatomy_term

Array

Top-level anatomy terms related to the experiment.

selected_top_level_anatomy_id

Array

Selected top-level anatomy IDs.

selected_top_level_anatomy_term

Array

Selected top-level anatomy terms.

intermediate_anatomy_id

Array

Intermediate anatomy IDs.

intermediate_anatomy_term

Array

Intermediate anatomy terms.

parent_anatomy_id

Array

Parent anatomy IDs.

parent_anatomy_term

Array

Parent anatomy terms.

child_anatomy_id

Array

Child anatomy IDs.

child_anatomy_term

Array

Child anatomy terms.

download_file_path

String

Path to download the file associated with the experiment.

image_link

String

Link to the image associated with the experiment.

file_type

String

The type of file.

parameter_association_stable_id

Array

Stable IDs for the parameter associations.

parameter_association_sequence_id

Array

Sequence IDs for the parameter associations.

parameter_association_dim_id

Array

Dimension IDs for the parameter associations.

parameter_association_name

Array

Names of the parameter associations.

parameter_association_value

Array

Values of the parameter associations.

developmental_stage_acc

String

Accession number for the developmental stage.

developmental_stage_name

String

Name of the developmental stage.

text_value

String

Text value associated with the experiment.

sub_term_id

Array

Sub-term IDs related to the experiment.

sub_term_name

Array

Sub-term names related to the experiment.

sub_term_description

Array

Descriptions of the sub-terms.

sequence_id

Number

The sequence ID related to the experiment.

age_in_days

Number

Age of the specimen in days.

age_in_weeks

Number

Age of the specimen in weeks.

download_url

String

URL to download data or resources associated with the experiment.

jpeg_url

String

URL to a JPEG image related to the experiment.

thumbnail_url

String

URL to a thumbnail image related to the experiment.

omero_id

String

OMERO database ID for the image.

top_level_mp_id

Array

The top-level MP (Mouse Phenotype) IDs associated with the experiment.

top_level_mp_term

Array

The top-level MP terms associated with the experiment.

intermediate_mp_id

Array

The intermediate MP IDs associated with the experiment.

intermediate_mp_term

Array

The intermediate MP terms associated with the experiment.

top_level_anatomy_term_synonym

Array

Synonyms for the top-level anatomy terms.

selected_top_level_anatomy_term_synonym

Array

Synonyms for the selected top-level anatomy terms.

intermediate_anatomy_term_synonym

Array

Synonyms for the intermediate anatomy terms.

parent_anatomy_term_synonym

Array

Synonyms for the parent anatomy terms.

child_anatomy_term_synonym

Array

Synonyms for the child anatomy terms.

2.2. Example Json

HTTP/1.1 200 OK
Content-Type: application/json
Content-Length: 4780

{
  "id" : "1",
  "observation_id" : "obs-001",
  "specimen_id" : "spec-001",
  "phenotyping_center_id" : 100,
  "phenotyping_center" : "Center A",
  "production_center_id" : 101,
  "production_center" : "Center B",
  "specimen_project_id" : 200,
  "specimen_project_name" : "Project X",
  "gene_accession_id" : "Gene-001",
  "gene_symbol" : "Gn1",
  "allele_accession_id" : "Allele-001",
  "allele_symbol" : "Al1",
  "zygosity" : "Homozygous",
  "sex" : "Male",
  "biological_model_id" : 300,
  "biological_sample_id" : 301,
  "biological_sample_group" : "Group 1",
  "strain_accession_id" : "Strain-001",
  "strain_name" : "Strain A",
  "genetic_background" : "Background 1",
  "allelic_composition" : "Comp 1",
  "colony_id" : "Colony-001",
  "litter_id" : "Litter-001",
  "date_of_birth" : "2020-01-01",
  "external_sample_id" : "ExtSample-001",
  "life_stage_name" : "Adult",
  "life_stage_acc" : "LS-001",
  "datasource_id" : 400,
  "datasource_name" : "DataSource A",
  "project_id" : 500,
  "project_name" : "Project Y",
  "pipeline_id" : 600,
  "pipeline_name" : "Pipeline Z",
  "pipeline_stable_id" : "PSI-001",
  "procedure_id" : 700,
  "procedure_name" : "Procedure 1",
  "procedure_stable_id" : "PS-001",
  "procedure_group" : "Group 2",
  "parameter_id" : 800,
  "parameter_name" : "Parameter 1",
  "parameter_stable_id" : "Param-001",
  "procedure_sequence_id" : "Seq-001",
  "experiment_id" : "Exp-001",
  "observation_type" : "Type 1",
  "data_type" : "Data Type 1",
  "experiment_source_id" : "Source-001",
  "date_of_experiment" : "2025-09-29",
  "weight_parameter_stable_id" : "WPID-001",
  "weight_date" : "2020-06-15",
  "weight_days_old" : 100,
  "weight" : 20.5,
  "data_point" : 5.5,
  "order_index" : 1,
  "dimension" : "Dimension 1",
  "time_point" : "Day 1",
  "discrete_point" : 1.5,
  "category" : "Category 1",
  "raw_category" : "Raw Category 1",
  "metadata" : [ "Meta1", "Meta2" ],
  "metadata_group" : "Metadata Group 1",
  "mp_id" : [ "MPID-1", "MPID-2" ],
  "mp_term" : [ "Term 1", "Term 2" ],
  "top_level_mp_id" : [ "TL-MPID-1", "TL-MPID-2" ],
  "top_level_mp_term" : [ "Top Level Term 1", "Top Level Term 2" ],
  "intermediate_mp_id" : [ "IMPID-1", "IMPID-2" ],
  "intermediate_mp_term" : [ "Intermediate Term 1", "Intermediate Term 2" ],
  "anatomy_id" : [ "AnatomyID-1", "AnatomyID-2" ],
  "anatomy_term" : [ "Anatomy Term 1", "Anatomy Term 2" ],
  "anatomy_id_term" : [ "AnatomyIDTerm-1", "AnatomyIDTerm-2" ],
  "anatomy_term_synonym" : [ "Synonym 1", "Synonym 2" ],
  "top_level_anatomy_id" : [ "TLAnatomyID-1", "TLAnatomyID-2" ],
  "top_level_anatomy_term" : [ "TL Anatomy Term 1", "TL Anatomy Term 2" ],
  "top_level_anatomy_term_synonym" : [ "TL Anatomy Term 1", "TL Anatomy Term 2" ],
  "selected_top_level_anatomy_id" : [ "STLAnatomyID-1", "STLAnatomyID-2" ],
  "selected_top_level_anatomy_term" : [ "Selected TL Anatomy Term 1", "Selected TL Anatomy Term 2" ],
  "selected_top_level_anatomy_term_synonym" : [ "Selected TL Anatomy Term 1", "Selected TL Anatomy Term 2" ],
  "intermediate_anatomy_id" : [ "IAnatomyID-1", "IAnatomyID-2" ],
  "intermediate_anatomy_term" : [ "Intermediate Anatomy Term 1", "Intermediate Anatomy Term 2" ],
  "intermediate_anatomy_term_synonym" : [ "Intermediate Anatomy Term 1", "Intermediate Anatomy Term 2" ],
  "parent_anatomy_id" : [ "ParentAnatomyID-1", "ParentAnatomyID-2" ],
  "parent_anatomy_term" : [ "Parent Anatomy Term 1", "Parent Anatomy Term 2" ],
  "parent_anatomy_term_synonym" : [ "Parent Anatomy Term 1", "Parent Anatomy Term 2" ],
  "child_anatomy_id" : [ "ChildAnatomyID-1", "ChildAnatomyID-2" ],
  "child_anatomy_term" : [ "Child Anatomy Term 1", "Child Anatomy Term 2" ],
  "child_anatomy_term_synonym" : [ "Child Anatomy Term 1", "Child Anatomy Term 2" ],
  "download_file_path" : "/path/to/download",
  "image_link" : "http://example.com/image",
  "file_type" : "jpeg",
  "parameter_association_stable_id" : [ "PAStableID-1", "PAStableID-2" ],
  "parameter_association_sequence_id" : [ "PASeqID-1", "PASeqID-2" ],
  "parameter_association_dim_id" : [ "PADimID-1", "PADimID-2" ],
  "parameter_association_name" : [ "PA Name 1", "PA Name 2" ],
  "parameter_association_value" : [ "PA Value 1", "PA Value 2" ],
  "developmental_stage_acc" : "DevStageAcc-1",
  "developmental_stage_name" : "Development Stage 1",
  "text_value" : "Some text value",
  "sub_term_id" : [ "SubTermID-1", "SubTermID-2" ],
  "sub_term_name" : [ "SubTerm Name 1", "SubTerm Name 2" ],
  "sub_term_description" : [ "SubTerm Description 1", "SubTerm Description 2" ],
  "sequence_id" : 123,
  "age_in_days" : 45,
  "age_in_weeks" : 6,
  "download_url" : "http://example.com/download",
  "jpeg_url" : "http://example.com/jpeg",
  "thumbnail_url" : "http://example.com/thumbnail",
  "omero_id" : "OmeroID-1"
}

3. Latest updates

  • 2024-04-15: Documentation Added