{"data":{"type":"samples","id":"ERS756459","attributes":{"sample-metadata":[{"key":"sample storage temperature","value":"-80","unit":"\\'||chr(38)||\\'deg;C"},{"key":"temperature","value":"15.992","unit":"\\'||chr(38)||\\'deg;C"},{"key":"investigation type","value":"mimarks-survey","unit":null},{"key":"project name","value":"PRJEB9624","unit":null},{"key":"collection date","value":"2012-05-29","unit":null},{"key":"sample collection device or method","value":"syringe","unit":null},{"key":"amount or size of sample collected","value":"0.002","unit":"L"},{"key":"target gene","value":"16s rRNA","unit":null},{"key":"target subfragment","value":"V1-V2","unit":null},{"key":"pcr primers","value":"27f-338r,27F: TCAGAGTTTGATCMTGGCTCAG + 338r: CATGCTGCCTCCCGTAGGAGT","unit":null},{"key":"multiplex identifiers","value":"f: CATGAGGA; r: AAGGCCTT","unit":null},{"key":"pcr conditions","value":"initial denaturation:98degC_30s; denaturation:98degC_9s;annealing:55degC_1min; elongation:72degC_90s; final elongation:72degC_10min; 30 cycles","unit":null},{"key":"sequencing method","value":"Sequencing by synthesis, Illumina paired-end","unit":null},{"key":"chemical administration","value":"Mix of ampiciline, gentamicine, tetracycline and kanamycine, each 100 µg/l seawater each","unit":null},{"key":"host common name","value":"Pacific oyster","unit":null},{"key":"host taxid","value":"29159","unit":null},{"key":"perturbation","value":"treated with mix of ampiciline, gentamicine, tetracycline and kanamycine (100 µg/l seawater each) between 2012-05-29 and 2012-06-01","unit":null},{"key":"NCBI sample classification","value":"29159","unit":null},{"key":"instrument model","value":"Illumina MiSeq","unit":null},{"key":"ENA checklist","value":"GSC MIxS host associated (ERC000013)","unit":null},{"key":"geographic location (region and locality)","value":"Schleswig Holstein, Sylt, List, Odewatt","unit":null},{"key":"host body habitat","value":"hemolymph","unit":null},{"key":"host body product","value":"NA","unit":null},{"key":"host body site","value":"adductor muscle","unit":null},{"key":"host life stage","value":"adult","unit":null},{"key":"sample volume or weight for DNA extraction","value":"0.2","unit":"mL"},{"key":"host-associated environmental package","value":"host-associated","unit":null}],"latitude":55.0292,"biosample":"SAMEA3461561","longitude":8.4343,"accession":"ERS756459","analysis-completed":"2017-03-21","collection-date":null,"geo-loc-name":"North Sea","sample-desc":"Pacific oyster (Crassostrea gigas) hemolymph microbiota; collected on Sylt, 2012-05-29; sample taken in the lab, before the antibiotic treatment; treated with mix of ampiciline, gentamicine, tetracycline and kanamycine (100 µg/l seawater each) between 2012-05-29 and 2012-06-01; oyster from Texel, translocated from Texel (NL) to Sylt (D)","environment-biome":"aquatic, marine, benthic, coastal","environment-feature":"organic","environment-material":"organic material, bodily fluid","sample-name":"Pacific oyster hemolymph microbiota from Sylt, translocated from Texel (NL)","sample-alias":"Cg_12_Hem_Sy_TxA_20120529","host-tax-id":29159,"species":"Crassostrea gigas","last-update":"2017-03-21T11:44:24"},"relationships":{"studies":{"links":{"related":"https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS756459/studies?format=json"},"data":[{"type":"studies","id":"MGYS00001607","links":{"self":"https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001607?format=json"}}]},"runs":{"links":{"related":"https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS756459/runs?format=json"}},"biome":{"data":{"type":"biomes","id":"root:Host-associated:Mollusca:Digestive system"},"links":{"related":"https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Host-associated:Mollusca:Digestive%20system?format=json"}}},"links":{"self":"https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS756459?format=json"}}}