{"data":{"type":"samples","id":"ERS494374","attributes":{"latitude":34.1504,"longitude":-56.9684,"biosample":"SAMEA2623756","sample-metadata":[{"key":"temperature","value":"18.169021","unit":null},{"key":"project name","value":"Tara Oceans expedition (2009-2013)","unit":null},{"key":"geographic location (longitude)","value":"-56.9684","unit":null},{"key":"geographic location (depth)","value":"250","unit":"m"},{"key":"collection date","value":"2012-02-27","unit":null},{"key":"environment (biome)","value":"marine biome (ENVO:00000447)","unit":null},{"key":"environment (feature)","value":"mesopelagic zone (ENVO:00000213)","unit":null},{"key":"environment (material)","value":"\"saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)\"","unit":null},{"key":"environmental package","value":"water","unit":null},{"key":"depth","value":"250","unit":null},{"key":"salinity","value":"36.563667","unit":null},{"key":"geographic location (latitude)","value":"34.1504","unit":null},{"key":"NCBI sample classification","value":"408172","unit":null},{"key":"instrument model","value":"Illumina HiSeq 2000","unit":null},{"key":"ENA checklist","value":"ERC000030","unit":null},{"key":"latitude end","value":"33.9044","unit":"DD"},{"key":"longitude end","value":"-56.7834","unit":"DD"},{"key":"marine region","value":"(search radius=5 degree) Marine Ecoregion:Bermuda (MRGID:21979)","unit":null},{"key":"protocol label","value":"BACT_NUC-RNA(10L-or-10min)_W0.22-3","unit":null},{"key":"sampling campaign","value":"TARA_20120223Z","unit":null},{"key":"sampling platform","value":"SV Tara","unit":null},{"key":"chlorophyll sensor","value":"0.004651","unit":"mg Chl/m3"},{"key":"citation","value":"tbd","unit":null},{"key":"event date/time end","value":"2012-02-27T21:34","unit":null},{"key":"event date/time start","value":"2012-02-27T15:28:31","unit":null},{"key":"event label","value":"TARA_20120227T1532Z_148b_Combined-EVENTS_CAST","unit":null},{"key":"further details","value":"tbd","unit":null},{"key":"last update date","value":"2014-05-01Z","unit":null},{"key":"nitrate sensor","value":"4.042901","unit":"µmol/L"},{"key":"oxygen sensor","value":"191.752575","unit":"µmol/Kg"},{"key":"salinity sensor","value":"36.563668","unit":"psu"},{"key":"sample collection device","value":"ROSETTE sampler with CTD (sbe9C) and 10 Niskin bottles","unit":null},{"key":"sample status","value":"This version can be used to provide data discovery services","unit":null},{"key":"sampling station","value":"TARA_148b","unit":null},{"key":"size fraction lower threshold","value":"0.22","unit":null},{"key":"size fraction upper threshold","value":"3","unit":null}],"accession":"ERS494374","analysis-completed":"2015-03-17","collection-date":"2012-02-27","geo-loc-name":null,"sample-desc":"\"This sample (TARA_B100001750) was collected during the Tara Oceans expedition (2009-2013) at station TARA_148b (latitudeN=34.1504, longitudeE=-56.9684) on date/time=2012-02-27T15:28:31, using a ROSETTE sampler with CTD (sbe9C) and 10 Niskin bottles. The sample material (saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)) was collected at a depth of 240-258 m, targeting a mesopelagic zone (ENVO:00000213) in the marine biome (ENVO:00000447). The sample was size-fractionated (0.22-3 micrometres), preserved on board with RNA-Later, and stored in liquid nitrogen for later detection of prokaryote nucleic acid sequences by pyrosequencing methods, and for later metagenomics/transcriptomics analysis. This sample has replicate sample(s): TARA_B100001751.\"","environment-biome":"marine biome (ENVO:00000447)","environment-feature":"mesopelagic zone (ENVO:00000213)","environment-material":"\"saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)\"","sample-name":"TARA_B100001750","sample-alias":"TARA_B100001750","host-tax-id":null,"species":null,"last-update":"2024-04-15T18:46:40"},"relationships":{"biome":{"data":{"type":"biomes","id":"root:Environmental:Aquatic:Marine:Oceanic"},"links":{"related":"https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Environmental:Aquatic:Marine:Oceanic?format=json"}},"studies":{"links":{"related":"https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS494374/studies?format=json"},"data":[{"type":"studies","id":"MGYS00000410","links":{"self":"https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00000410?format=json"}},{"type":"studies","id":"MGYS00001482","links":{"self":"https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001482?format=json"}},{"type":"studies","id":"MGYS00002008","links":{"self":"https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00002008?format=json"}},{"type":"studies","id":"MGYS00002392","links":{"self":"https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00002392?format=json"}},{"type":"studies","id":"MGYS00006075","links":{"self":"https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00006075?format=json"}}]},"runs":{"links":{"related":"https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS494374/runs?format=json"}}},"links":{"self":"https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS494374?format=json"}}}