{"data":{"type":"samples","id":"ERS494274","attributes":{"sample-metadata":[{"key":"temperature","value":"11.012346","unit":null},{"key":"project name","value":"Tara Oceans expedition (2009-2013)","unit":null},{"key":"geographic location (longitude)","value":"-71.2907","unit":null},{"key":"geographic location (depth)","value":"640","unit":"m"},{"key":"collection date","value":"2012-02-16","unit":null},{"key":"environment (biome)","value":"marine biome (ENVO:00000447)","unit":null},{"key":"environment (feature)","value":"mesopelagic zone (ENVO:00000213)","unit":null},{"key":"environment (material)","value":"\"saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)\"","unit":null},{"key":"environmental package","value":"water","unit":null},{"key":"depth","value":"640.0","unit":null},{"key":"salinity","value":"35.402184","unit":null},{"key":"geographic location (latitude)","value":"34.6663","unit":null},{"key":"NCBI sample classification","value":"408172","unit":null},{"key":"instrument model","value":"Illumina HiSeq 2000","unit":null},{"key":"ENA checklist","value":"ERC000030","unit":null},{"key":"latitude end","value":"34.6054","unit":"DD"},{"key":"longitude end","value":"-71.2317","unit":"DD"},{"key":"marine region","value":"(search radius=5 degrees) Marine Ecoregion:Virginian (MRGID:21853)","unit":null},{"key":"protocol label","value":"BACT_NUC-DNA(100L)_W0.22-3","unit":null},{"key":"sampling campaign","value":"TARA_20120212Z","unit":null},{"key":"sampling platform","value":"SV Tara","unit":null},{"key":"chlorophyll sensor","value":"0.006052","unit":"mg Chl/m3"},{"key":"citation","value":"tbd","unit":null},{"key":"event date/time end","value":"2012-02-16T18:22","unit":null},{"key":"event date/time start","value":"2012-02-16T12:01:25","unit":null},{"key":"event label","value":"TARA_20120216T1208Z_146_Combined-EVENTS_CAST","unit":null},{"key":"further details","value":"tbd","unit":null},{"key":"last update date","value":"2014-05-01Z","unit":null},{"key":"nitrate sensor","value":"21.830872","unit":"µmol/L"},{"key":"oxygen sensor","value":"138.0832","unit":"µmol/Kg"},{"key":"salinity sensor","value":"35.402185","unit":"psu"},{"key":"sample collection device","value":"ROSETTE sampler with CTD (sbe9C) and 10 Niskin bottles","unit":null},{"key":"sample status","value":"This version can be used to provide data discovery services","unit":null},{"key":"sampling station","value":"TARA_146","unit":null},{"key":"size fraction lower threshold","value":"0.22","unit":null},{"key":"size fraction upper threshold","value":"3","unit":null}],"latitude":34.6663,"biosample":"SAMEA2623693","longitude":-71.2907,"accession":"ERS494274","analysis-completed":"2015-03-17","collection-date":"2012-02-16","geo-loc-name":null,"sample-desc":"\"This sample (TARA_B100001167) was collected during the Tara Oceans expedition (2009-2013) at station TARA_146 (latitudeN=34.6663, longitudeE=-71.2907) on date/time=2012-02-16T12:01:25, using a ROSETTE sampler with CTD (sbe9C) and 10 Niskin bottles. The sample material (saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)) was collected at a depth of 630-648 m, targeting a mesopelagic zone (ENVO:00000213) in the marine biome (ENVO:00000447). The sample was size-fractionated (0.22-3 micrometres), and stored in liquid nitrogen for later detection of prokaryote nucleic acid sequences by pyrosequencing methods, and for later metagenomics analysis. This sample has replicate sample(s): TARA_B100001166.\"","environment-biome":"marine biome (ENVO:00000447)","environment-feature":"mesopelagic zone (ENVO:00000213)","environment-material":"\"saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)\"","sample-name":"TARA_B100001167","sample-alias":"TARA_B100001167","host-tax-id":null,"species":null,"last-update":"2024-04-15T18:47:07"},"relationships":{"studies":{"links":{"related":"https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS494274/studies?format=json"},"data":[{"type":"studies","id":"MGYS00000410","links":{"self":"https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00000410?format=json"}},{"type":"studies","id":"MGYS00002008","links":{"self":"https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00002008?format=json"}},{"type":"studies","id":"MGYS00002392","links":{"self":"https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00002392?format=json"}}]},"runs":{"links":{"related":"https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS494274/runs?format=json"}},"biome":{"data":{"type":"biomes","id":"root:Environmental:Aquatic:Marine:Oceanic"},"links":{"related":"https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Environmental:Aquatic:Marine:Oceanic?format=json"}}},"links":{"self":"https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS494274?format=json"}}}