{"data":{"type":"samples","id":"ERS494170","attributes":{"latitude":39.2305,"biosample":"SAMEA2623627","longitude":-70.0377,"sample-metadata":[{"key":"temperature","value":"14.11885","unit":null},{"key":"project name","value":"Tara Oceans expedition (2009-2013)","unit":null},{"key":"geographic location (longitude)","value":"-70.0377","unit":null},{"key":"geographic location (depth)","value":"5","unit":"m"},{"key":"collection date","value":"2012-02-02","unit":null},{"key":"environment (biome)","value":"marine biome (ENVO:00000447)","unit":null},{"key":"environment (feature)","value":"surface water layer (ENVO:00002042)","unit":null},{"key":"environment (material)","value":"\"saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)\"","unit":null},{"key":"environmental package","value":"water","unit":null},{"key":"depth","value":"5.0","unit":null},{"key":"salinity","value":"35.18335","unit":null},{"key":"geographic location (latitude)","value":"39.2305","unit":null},{"key":"NCBI sample classification","value":"408172","unit":null},{"key":"instrument model","value":"Illumina HiSeq 2000","unit":null},{"key":"ENA checklist","value":"ERC000030","unit":null},{"key":"latitude end","value":"39.2173","unit":"DD"},{"key":"longitude end","value":"-72.0327","unit":"DD"},{"key":"marine region","value":"\"(search radius=5 degrees) Marine Ecoregion:Gulf of Maine/Bay of Fundy (MRGID:21849), Marine Ecoregion:Virginian (MRGID:21853)\"","unit":null},{"key":"protocol label","value":"BACT_NUC-DNA(100L)_W0.22-3","unit":null},{"key":"sampling campaign","value":"TARA_20120126Z","unit":null},{"key":"sampling platform","value":"SV Tara","unit":null},{"key":"chlorophyll sensor","value":"0.296307","unit":"mg Chl/m3"},{"key":"citation","value":"tbd","unit":null},{"key":"event date/time end","value":"2012-02-02T13:52","unit":null},{"key":"event date/time start","value":"2012-02-02T11:52","unit":null},{"key":"event label","value":"TARA_20120202T1152Z_145_EVENT_PUMP","unit":null},{"key":"further details","value":"tbd","unit":null},{"key":"last update date","value":"2014-05-01Z","unit":null},{"key":"nitrate sensor","value":"3.478193","unit":"µmol/L"},{"key":"oxygen sensor","value":"233.859","unit":"µmol/Kg"},{"key":"salinity sensor","value":"35.18335","unit":"psu"},{"key":"sample collection device","value":"PUMP (High Volume Peristaltic Pump)","unit":null},{"key":"sample status","value":"This version can be used to provide data discovery services","unit":null},{"key":"sampling station","value":"TARA_145","unit":null},{"key":"size fraction lower threshold","value":"0.22","unit":null},{"key":"size fraction upper threshold","value":"3","unit":null}],"accession":"ERS494170","analysis-completed":"2015-03-17","collection-date":"2012-02-02","geo-loc-name":null,"sample-desc":"\"This sample (TARA_B100001142) was collected during the Tara Oceans expedition (2009-2013) at station TARA_145 (latitudeN=39.2305, longitudeE=-70.0377) on date/time=2012-02-02T11:52, using a PUMP (High Volume Peristaltic Pump). The sample material (saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)) was collected at a depth of 3-7 m, targeting a surface water layer (ENVO:00002042) in the marine biome (ENVO:00000447). The sample was size-fractionated (0.22-3 micrometres), and stored in liquid nitrogen for later detection of prokaryote nucleic acid sequences by pyrosequencing methods, and for later metagenomics analysis. This sample has replicate sample(s): TARA_B100001141.\"","environment-biome":"marine biome (ENVO:00000447)","environment-feature":"surface water layer (ENVO:00002042)","environment-material":"\"saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)\"","sample-name":"TARA_B100001142","sample-alias":"TARA_B100001142","host-tax-id":null,"species":null,"last-update":"2024-04-15T18:47:49"},"relationships":{"runs":{"links":{"related":"https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS494170/runs?format=json"}},"biome":{"data":{"type":"biomes","id":"root:Environmental:Aquatic:Marine:Oceanic"},"links":{"related":"https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Environmental:Aquatic:Marine:Oceanic?format=json"}},"studies":{"links":{"related":"https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS494170/studies?format=json"},"data":[{"type":"studies","id":"MGYS00000410","links":{"self":"https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00000410?format=json"}},{"type":"studies","id":"MGYS00002008","links":{"self":"https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00002008?format=json"}},{"type":"studies","id":"MGYS00002392","links":{"self":"https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00002392?format=json"}},{"type":"studies","id":"MGYS00006605","links":{"self":"https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00006605?format=json"}}]}},"links":{"self":"https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS494170?format=json"}}}