{"data":{"type":"samples","id":"ERS489074","attributes":{"latitude":14.5536,"longitude":70.0128,"biosample":"SAMEA2620217","sample-metadata":[{"key":"temperature","value":"27.117662","unit":null},{"key":"project name","value":"Tara Oceans expedition (2009-2013)","unit":null},{"key":"geographic location (longitude)","value":"70.0128","unit":null},{"key":"geographic location (depth)","value":"60","unit":"m"},{"key":"collection date","value":"2010-03-30","unit":null},{"key":"environment (biome)","value":"marine biome (ENVO:00000447)","unit":null},{"key":"environment (feature)","value":"deep chlorophyll maximum layer (ENVO:xxxxxxxx)","unit":null},{"key":"environment (material)","value":"\"saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)\"","unit":null},{"key":"environmental package","value":"water","unit":null},{"key":"depth","value":"60.0","unit":null},{"key":"salinity","value":"36.496162","unit":null},{"key":"geographic location (latitude)","value":"14.5536","unit":null},{"key":"NCBI sample classification","value":"408172","unit":null},{"key":"instrument model","value":"Illumina HiSeq 2000","unit":null},{"key":"ENA checklist","value":"ERC000030","unit":null},{"key":"latitude end","value":"14.5375","unit":"DD"},{"key":"longitude end","value":"70.0244","unit":"DD"},{"key":"marine region","value":"(search radius=5 degrees) Marine Province:West and South Indian Shelf (MRGID:21777)","unit":null},{"key":"protocol label","value":"BACT_NUC-RNA(10L-or-10min)_W0.22-1.6","unit":null},{"key":"sampling campaign","value":"TARA_20100327Z","unit":null},{"key":"sampling platform","value":"SV Tara","unit":null},{"key":"chlorophyll sensor","value":"0.47554","unit":"mg Chl/m3"},{"key":"citation","value":"tbd","unit":null},{"key":"event date/time end","value":"2010-03-30T12:20","unit":null},{"key":"event date/time start","value":"2010-03-30T10:56","unit":null},{"key":"event label","value":"TARA_20100330T1056Z_041_EVENT_PUMP","unit":null},{"key":"further details","value":"tbd","unit":null},{"key":"last update date","value":"2014-05-01Z","unit":null},{"key":"nitrate sensor","value":"-0.224514","unit":"µmol/L"},{"key":"oxygen sensor","value":"148.328125","unit":"µmol/Kg"},{"key":"salinity sensor","value":"36.496162","unit":"psu"},{"key":"sample collection device","value":"PUMP (High Volume Peristaltic Pump) with ECOTriplet","unit":null},{"key":"sample status","value":"This version can be used to provide data discovery services","unit":null},{"key":"sampling station","value":"TARA_041","unit":null},{"key":"size fraction lower threshold","value":"0.22","unit":null},{"key":"size fraction upper threshold","value":"1.6","unit":null}],"accession":"ERS489074","analysis-completed":"2015-03-17","collection-date":"2010-03-30","geo-loc-name":null,"sample-desc":"\"This sample (TARA_B100000287) was collected during the Tara Oceans expedition (2009-2013) at station TARA_041 (latitudeN=14.5536, longitudeE=70.0128) on date/time=2010-03-30T10:56, using a PUMP (High Volume Peristaltic Pump) with ECOTriplet. The sample material (saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)) was collected at a depth of 58-62 m, targeting a deep chlorophyll maximum layer (ENVO:xxxxxxxx) in the marine biome (ENVO:00000447). The sample was size-fractionated (0.22-1.6 micrometres), preserved on board with RNA-Later, and stored in liquid nitrogen for later detection of prokaryote nucleic acid sequences by pyrosequencing methods, and for later metagenomics/transcriptomics analysis.\"","environment-biome":"marine biome (ENVO:00000447)","environment-feature":"deep chlorophyll maximum layer (ENVO:xxxxxxxx)","environment-material":"\"saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)\"","sample-name":"TARA_B100000287","sample-alias":"TARA_B100000287","host-tax-id":null,"species":null,"last-update":"2024-04-15T17:44:30"},"relationships":{"biome":{"data":{"type":"biomes","id":"root:Environmental:Aquatic:Marine:Oceanic"},"links":{"related":"https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Environmental:Aquatic:Marine:Oceanic?format=json"}},"studies":{"links":{"related":"https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS489074/studies?format=json"},"data":[{"type":"studies","id":"MGYS00000410","links":{"self":"https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00000410?format=json"}},{"type":"studies","id":"MGYS00001482","links":{"self":"https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001482?format=json"}},{"type":"studies","id":"MGYS00002008","links":{"self":"https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00002008?format=json"}},{"type":"studies","id":"MGYS00002392","links":{"self":"https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00002392?format=json"}},{"type":"studies","id":"MGYS00006075","links":{"self":"https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00006075?format=json"}}]},"runs":{"links":{"related":"https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS489074/runs?format=json"}}},"links":{"self":"https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS489074?format=json"}}}