{"data":{"type":"samples","id":"ERS488599","attributes":{"latitude":23.4183,"longitude":37.245,"biosample":"SAMEA2619840","sample-metadata":[{"key":"temperature","value":"26.050367","unit":null},{"key":"project name","value":"Tara Oceans expedition (2009-2013)","unit":null},{"key":"geographic location (longitude)","value":"37.245","unit":null},{"key":"geographic location (depth)","value":"80","unit":"m"},{"key":"collection date","value":"2010-01-11","unit":null},{"key":"environment (biome)","value":"marine biome (ENVO:00000447)","unit":null},{"key":"environment (feature)","value":"deep chlorophyll maximum layer (ENVO:xxxxxxxx)","unit":null},{"key":"environment (material)","value":"\"saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)\"","unit":null},{"key":"environmental package","value":"water","unit":null},{"key":"depth","value":"80.0","unit":null},{"key":"salinity","value":"40.196434","unit":null},{"key":"geographic location (latitude)","value":"23.4183","unit":null},{"key":"NCBI sample classification","value":"408172","unit":null},{"key":"instrument model","value":"Illumina HiSeq 2000","unit":null},{"key":"ENA checklist","value":"ERC000030","unit":null},{"key":"latitude end","value":"23.4217","unit":"DD"},{"key":"longitude end","value":"37.2517","unit":"DD"},{"key":"marine region","value":"\"(search radius=5 degrees) Marine Province:Red Sea and Gulf of Aden (MRGID:21776), Marine Ecoregion:Northern and Central Red Sea (MRGID:21919)\"","unit":null},{"key":"protocol label","value":"BACT_NUC-DNA(100L)_W0.22-1.6","unit":null},{"key":"sampling campaign","value":"TARA_20100108Z","unit":null},{"key":"sampling platform","value":"SV Tara","unit":null},{"key":"chlorophyll sensor","value":"0.224444","unit":"mg Chl/m3"},{"key":"citation","value":"tbd","unit":null},{"key":"event date/time end","value":"2010-01-11T15:20","unit":null},{"key":"event date/time start","value":"2010-01-11T14:17","unit":null},{"key":"event label","value":"TARA_20100111T1417Z_032_EVENT_PUMP","unit":null},{"key":"further details","value":"tbd","unit":null},{"key":"last update date","value":"2014-05-01Z","unit":null},{"key":"nitrate sensor","value":"1.201064","unit":"µmol/L"},{"key":"oxygen sensor","value":"179.968","unit":"µmol/Kg"},{"key":"salinity sensor","value":"40.196433","unit":"psu"},{"key":"sample collection device","value":"PUMP (High Volume Peristaltic Pump) with ECOTriplet","unit":null},{"key":"sample status","value":"This version can be used to provide data discovery services","unit":null},{"key":"sampling station","value":"TARA_032","unit":null},{"key":"size fraction lower threshold","value":"0.22","unit":null},{"key":"size fraction upper threshold","value":"1.6","unit":null}],"accession":"ERS488599","analysis-completed":"2015-03-17","collection-date":"2010-01-11","geo-loc-name":null,"sample-desc":"\"This sample (TARA_A100001037) was collected during the Tara Oceans expedition (2009-2013) at station TARA_032 (latitudeN=23.4183, longitudeE=37.245) on date/time=2010-01-11T14:17, using a PUMP (High Volume Peristaltic Pump) with ECOTriplet. The sample material (saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)) was collected at a depth of 78-82 m, targeting a deep chlorophyll maximum layer (ENVO:xxxxxxxx) in the marine biome (ENVO:00000447). The sample was size-fractionated (0.22-1.6 micrometres), and stored in liquid nitrogen for later detection of prokaryote nucleic acid sequences by pyrosequencing methods, and for later metagenomics analysis. This sample has replicate sample(s): TARA_A100001193.\"","environment-biome":"marine biome (ENVO:00000447)","environment-feature":"deep chlorophyll maximum layer (ENVO:xxxxxxxx)","environment-material":"\"saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)\"","sample-name":"TARA_A100001037","sample-alias":"TARA_A100001037","host-tax-id":null,"species":null,"last-update":"2024-04-15T17:47:33"},"relationships":{"biome":{"data":{"type":"biomes","id":"root:Environmental:Aquatic:Marine:Oceanic"},"links":{"related":"https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Environmental:Aquatic:Marine:Oceanic?format=json"}},"studies":{"links":{"related":"https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS488599/studies?format=json"},"data":[{"type":"studies","id":"MGYS00000410","links":{"self":"https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00000410?format=json"}},{"type":"studies","id":"MGYS00002008","links":{"self":"https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00002008?format=json"}},{"type":"studies","id":"MGYS00002392","links":{"self":"https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00002392?format=json"}}]},"runs":{"links":{"related":"https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS488599/runs?format=json"}}},"links":{"self":"https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS488599?format=json"}}}