{"data":{"type":"samples","id":"ERS437589","attributes":{"latitude":38.6371,"biosample":"SAMEA2468029","longitude":-90.2571,"sample-metadata":[{"key":"sex","value":"male","unit":null},{"key":"investigation type","value":"mimarks-survey","unit":null},{"key":"project name","value":"Functional characterization of mucosal IgA-targeted members of the gut microbiota of undernourished Malawian children","unit":null},{"key":"geographic location (longitude)","value":"-90.2571","unit":null},{"key":"geographic location (country and/or sea,region)","value":"USA","unit":null},{"key":"collection date","value":"2011-01-05","unit":null},{"key":"environment (biome)","value":"ENVO:01000219","unit":null},{"key":"environment (feature)","value":"ENVO:01000159","unit":null},{"key":"environment (material)","value":"ENVO:00002003","unit":null},{"key":"environmental package","value":"host-associated","unit":null},{"key":"sample collection device or method","value":"Unfractionated FACS sample","unit":null},{"key":"target gene","value":"16S rRNA","unit":null},{"key":"target subfragment","value":"V2","unit":null},{"key":"sequencing method","value":"pyrosequencing","unit":null},{"key":"host common name","value":"mouse","unit":null},{"key":"host taxid","value":"10090","unit":null},{"key":"geographic location (latitude)","value":"38.63707","unit":null},{"key":"NCBI sample classification","value":"10090","unit":null},{"key":"instrument model","value":"454 GS FLX Titanium","unit":null},{"key":"ENA checklist","value":"ERC000011","unit":null},{"key":"host scientific name","value":"Mus musculus","unit":null}],"accession":"ERS437589","analysis-completed":"2016-06-15","collection-date":"2011-01-05","geo-loc-name":"USA","sample-desc":"Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #4, 16 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a macro- and micro- nutrient deplete Malawi diet. This sample was fractionated by sorting the Input fraction. Please see our paper for additional details.","environment-biome":"ENVO:01000219","environment-feature":"ENVO:01000159","environment-material":"ENVO:00002003","sample-name":"454Reads.B_57HE_N_MAL_4_D16_ALL","sample-alias":"454Reads.B_57HE_N_MAL_4_D16_ALL","host-tax-id":9606,"species":"Homo sapiens","last-update":"2024-01-09T22:35:46"},"relationships":{"runs":{"links":{"related":"https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS437589/runs?format=json"}},"biome":{"data":{"type":"biomes","id":"root:Host-associated:Human:Digestive system"},"links":{"related":"https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Host-associated:Human:Digestive%20system?format=json"}},"studies":{"links":{"related":"https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS437589/studies?format=json"},"data":[{"type":"studies","id":"MGYS00001075","links":{"self":"https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001075?format=json"}}]}},"links":{"self":"https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS437589?format=json"}}}