EBI metagenomics

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In the Fall of 2014, Jessica Abbott (from Jay Stachowicz's lab) and Susan Williams performed an ammonification experiment in Bodega Bay, CA. The experiment involved 72 different plots ...

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Seawater will be collected and filtered for microbiome and bacterioplankton sequencing and analyses at various depths during planned DEEPEND cruise expeditions to the GOM in 2016. Filters ...

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The human gut metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA290729. This project includes samples from the ...

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The PD-GER Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJEB17784. This project includes samples from the following biomes: ...

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The AT_CRC Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJEB7774. This project includes samples from the following biomes: ...

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The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA301903. This project includes samples from the following biomes: ...

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The microbiota associated to the gastric cavity of four exemplars of the jellyfish Cotylorhiza tuberculata has been studied by means of cultured-dependent and –independent methods. The ...

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The seawater metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA329908. This project includes samples from the ...

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The human gut metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA237362. This project includes samples from the ...

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The Impact of faecal microbiota transplantation on the intestinal microbiome in metabolic syndrome patients Third Party Annotation (TPA) assembly was derived from the primary whole genome ...

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The Colorectal cancer and the human gut microbiome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJEB12449. This project includes ...

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The human gut metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA375935. This project includes samples from the ...

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Abyssal sediments, polymetallic nodules, and water-column samples were collected from the UKSRL1 claim area within the Clarion-Clipperton fracture zone in the Pacific Ocean. ...

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Samples were collected from the top 10cm of marine sediment from Port Curtis, Gladstone, Queensland, Australia. Sampling occurred over two tropical wet seasons (October to May) and two ...

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How to cite

Cover of the Nucleic Acids Research journal

To cite EBI Metagenomics, please refer to the following publication:

Alex L. Mitchell, Maxim Scheremetjew, Hubert Denise, Simon Potter, Aleksandra Tarkowska, Matloob Qureshi, Gustavo A. Salazar, Sebastien Pesseat, Miguel A. Boland, Fiona M. I. Hunter, Petra ten Hoopen, Blaise Alako, Clara Amid, Darren J. Wilkinson, Thomas P. Curtis, Guy Cochrane, Robert D. Finn (2017).
EBI Metagenomics in 2017: enriching the analysis of microbial communities, from sequence reads to assemblies. Nucleic Acids Research (2017) doi: 10.1093/nar/gkx967

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