EBI metagenomics

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Anthropogenic impacts and fecal populations at Little Sippewissett Marsh. ...

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During late spring and summer of 2010, the Northern Gulf of Mexico (GoM) was exposed to an oil spill different in magnitude and scope from any previous spill. The Deepwater Horizon, an ...

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We aim to determine spatial and temporal distribution and diversity of marine picoeukaryotes in marginal seas of the northwestern Pacific Ocean. ...

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The study focuses on Atlantis II and Discovery deeps brine pool sites, specifically sub-seafloor sediment. ...

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The overall objective of this project (Baselines Initiative) is to generate several 16S rRNA gene databases to establish robust baseline information on the biological communities in marine ...

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The formation and maintenance of deep-sea ferromanganese/polymetallic nodules still remains a mystery 140 years after their discovery. The wealth of rare metals concentrated in these ...

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Western Antarctic Peninsula Microbial Community Assembly ...

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Deep-sequencing technologies are becoming nearly routine to describe microbial community composition in environmental samples. 18S rDNA pyrosequencing has ...

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Protistan communities of the upper Arctic Ocean (18S SSU-rRNA Targeted Locus), sampled during the MALINA cruise, August 2009. ...

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In the present study, we performed a detailed investigation of the 18S-rDNA, namely, numbers of registered sequences, frequencies of amplification success, the amplicon sequence variability ...

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Background: Zooplankton play an important role in our oceans, in biogeochemical cycling and providing a food source for commercially important fish larvae. However, difficulties in ...

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Sediment-hosting hydrothermal systems in the Okinawa Trough maintain a large amount of liquid, supercritical and hydrate phases of CO2 in the seabed. The emission of CO2 may critically ...

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We aimed to explore the community composition and turnover of eukaryotic and bacterial microorganisms associated with ice-associated and sinking algal aggregates, as well as ...

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We determined the effect of sample size fractionation (5 size fractions) and DNA extraction (2 methods) on the composition of the prokaryotic (16s) and eukaryotic (18s) plankton community ...

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How to cite

Cover of the Nucleic Acids Research journal

To cite EBI Metagenomics, please refer to the following publication:

Alex L. Mitchell, Maxim Scheremetjew, Hubert Denise, Simon Potter, Aleksandra Tarkowska, Matloob Qureshi, Gustavo A. Salazar, Sebastien Pesseat, Miguel A. Boland, Fiona M. I. Hunter, Petra ten Hoopen, Blaise Alako, Clara Amid, Darren J. Wilkinson, Thomas P. Curtis, Guy Cochrane, Robert D. Finn (2017).
EBI Metagenomics in 2017: enriching the analysis of microbial communities, from sequence reads to assemblies. Nucleic Acids Research (2017) doi: 10.1093/nar/gkx967

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