EBI metagenomics

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This collection includes whole genome sequences of purified isolates of marine bacteria, isolated on Vibrio-selective media, and viruses infecting a subset of these strains. All derive from ...

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Marine ecosystems are distinctive ecological niche, with a variety of microbes playing important roles in nutrient recycling and other ecological processes, thereby requiring a thorough ...

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Microbial community in seawater sample ...

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The diversity and composition of SOB in sediments from the East China Sea was investigated based on the high-throughput sequencing analyses of the soxB gene ...

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the aim of the project is to determine the effect of plastics on marine bacterial community ...

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Porcupine Seabight 16S Ribosomal RNA ...

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Metatranscriptome sequencing from different depths to retain small and large cell size (Protists Organisms). The RNA was extracted and submitted to high throughput sequencing. ...

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In-planta sporulation mediates host-partner interactions in the alder-Frankia-ectomycorrhizae tripartite symbiosisfastq files from metabarcoding on nifH gene.primer ...

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Comparison of different sample types using different primers and platforms ...

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Human-associated microbial community composition is highly variable across host individuals, but the sources of this variability remain poorly understood. Previous studies have explored ...

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Understanding the triad of host response, microbiome and disease status is potentially informative for disease prediction, prevention, early intervention and treatment. Using longitudinal ...

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We investigated the oral microbiota from human saliva samples of undergraduate student athletes and non-athletes, by sequencing 16S rDNA using high-throughput next-generation Illumina ...

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SMP - tongue samples from Flores_SMP ID: ...

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Human identification has played a prominent role in forensic science for the past two decades and will continue to do so. The development of techniques to exploit samples, which cannot be ...

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Eleven patients who have peri-implantitis and periodontitis were selected. They were evaluated based on the clinical examination and radiographic data. Sub-gingival and sub-mucosal biofilm ...

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How to cite

Cover of the Nucleic Acids Research journal

To cite EBI Metagenomics, please refer to the following publication:

Alex L. Mitchell, Maxim Scheremetjew, Hubert Denise, Simon Potter, Aleksandra Tarkowska, Matloob Qureshi, Gustavo A. Salazar, Sebastien Pesseat, Miguel A. Boland, Fiona M. I. Hunter, Petra ten Hoopen, Blaise Alako, Clara Amid, Darren J. Wilkinson, Thomas P. Curtis, Guy Cochrane, Robert D. Finn (2017).
EBI Metagenomics in 2017: enriching the analysis of microbial communities, from sequence reads to assemblies. Nucleic Acids Research (2017) doi: 10.1093/nar/gkx967

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