EBI metagenomics

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This studyexamined the saliva and subgingival microbiota of subjects with chronic periodontitis before andafter scaling and root planing and subjects without disease ...

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This study used a next-generation sequencing approach to identify the bacterial taxa occurring in the advanced front of caries biofilms associated with pulp exposure and irreversible ...

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16S rRNA gene sequences from carious dentine ...

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Current knowledge of the microbial composition of dental plaque in early gingivitis is based largely on microscopy and cultural methods, which do not provide a comprehensive description of ...

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Gingivitis is the most common gum infection, yet its etiology remains elusive. We designed a retrogression-progression model (RPM) to simulate the development and reoccurrence of ...

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Periodontitis has a polymicrobial etiology within the framework of a complex microbial ecosystem. With advances in sequencing technologies comprehensive studies to elucidate bacterial ...

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We performed a comparative metagenomic analysis of microbialite samples along a depth gradient to characterise the functional profile of the microbialite-associated microbial communities. ...

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The aim of the study was to asses biodegradation efficiency of dispersed oil of two Norwegian seawater sources. One source of seawater used in the study was local (Trondheimsfjord), while ...

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Biodegradation study was conducted with two different oils (naphthenic and asphaltenic) at two different temperatures (5C and 13C). The aim of the study was to evaluate differences in ...

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Samples were isolated from stromatolitic microbial mats from Bahamas. ...

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Metagenome of a intertidal thrombolitic mat community from Highborne Cay, Bahamas. ...

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The study included fungal genetic diversity assessment by ITS-1 next generation sequencing (NGS) analyses as well as the characterization of the catabolic potential of microbial communities ...

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An expedition spanning nearly the entire eastern Red Sea. We sampled at eight stations along this route, sampling from the surface down to 500m. ...

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Surface water collected in the Baltic Proper, 10 km east of Öland in the Baltic Proper (N 56°55.851, E 17°03.640) ...

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Abstract: the bacteria in the Yangtze River ...

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How to cite

Cover of the Nucleic Acids Research journal

To cite EBI Metagenomics, please refer to the following publication:

Alex L. Mitchell, Maxim Scheremetjew, Hubert Denise, Simon Potter, Aleksandra Tarkowska, Matloob Qureshi, Gustavo A. Salazar, Sebastien Pesseat, Miguel A. Boland, Fiona M. I. Hunter, Petra ten Hoopen, Blaise Alako, Clara Amid, Darren J. Wilkinson, Thomas P. Curtis, Guy Cochrane, Robert D. Finn (2017).
EBI Metagenomics in 2017: enriching the analysis of microbial communities, from sequence reads to assemblies. Nucleic Acids Research (2017) doi: 10.1093/nar/gkx967

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