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Acidaminococcus fermentans

Taxonomy
Taxonomy database identifier: 905
Superkingdom Bacteria
Phylum Firmicutes
Class Clostridia
Order Clostridiales
Species fermentans
Family Veillonellaceae
Genus Acidaminococcus
Peptidase View peptidase sequences from Acidaminococcus fermentans
Count of known and putative peptidases: 73, non-peptidase homologues 49
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AC A8 unassigned family A8 unassigned peptidases MER0196861 lspA Acfer_1509
AD A24 unassigned subfamily A24A unassigned peptidases MER0196807 Acfer_0478
AD A24 unassigned subfamily A24A unassigned peptidases MER0196836 Acfer_1032
CA C1 unassigned subfamily C1B unassigned peptidases MER0196838 Acfer_1040
CF C15 C15.001 pyroglutamyl-peptidase I (prokaryote) MER0196884 pcp Acfer_1956
CL C82 unassigned subfamily C82A unassigned peptidases MER0196792 Acfer_0279
CL C82 unassigned subfamily C82A unassigned peptidases MER0196877 Acfer_1795
CO C40 C40.006 PgpA peptidase MER0196784 Acfer_0115
CO C40 non-peptidase homologue family C40 non-peptidase homologues MER0196822 Acfer_0818
CO C40 non-peptidase homologue family C40 non-peptidase homologues MER0196873 Acfer_1665
MA M32 unassigned family M32 unassigned peptidases MER0981642
MA M41 M41.009 FtsH-2 peptidase MER0196867 ftsH1 Acfer_1596
MA M41 unassigned family M41 unassigned peptidases MER0196882 ftsH2 Acfer_1862
MA M48 unassigned subfamily M48A unassigned peptidases MER0196817 Acfer_0716
MA M48 unassigned subfamily M48B unassigned peptidases MER0196844 htpX Acfer_1206
MA M48 unassigned subfamily M48C unassigned peptidases MER0196872 Acfer_1638
MA M48 unassigned subfamily M48C unassigned peptidases MER0196896 Acfer_2088
MA M48 unassigned family M48 unassigned peptidases MER0196795 Acfer_0326
MA M61 non-peptidase homologue family M61 non-peptidase homologues MER0901469
MD M15 unassigned subfamily M15D unassigned peptidases MER0196823 Acfer_0822
ME M16 unassigned subfamily M16C unassigned peptidases MER0196830 Acfer_0907
MG M24 M24.031 leucine aminopeptidase (Thermotoga-type) MER0196828 Acfer_0901
MG M24 non-peptidase homologue family M24 non-peptidase homologues MER0196781 Acfer_0059
MG M24 unassigned subfamily M24A unassigned peptidases MER0196862 Acfer_1561
MH M18 unassigned family M18 unassigned peptidases MER0196837 Acfer_1038
MH M18 unassigned family M18 unassigned peptidases MER0196857 Acfer_1473
MH M20 non-peptidase homologue subfamily M20D non-peptidase homologues MER0196853 Acfer_1363
MH M20 non-peptidase homologue subfamily M20D non-peptidase homologues MER0196895 Acfer_2084
MH M20 non-peptidase homologue family M20 non-peptidase homologues MER0196868 Acfer_1603
MH M20 unassigned subfamily M20A unassigned peptidases MER0196818 Acfer_0764
MH M20 unassigned subfamily M20A unassigned peptidases MER0196865 Acfer_1590
MH M20 unassigned subfamily M20A unassigned peptidases MER0196883 Acfer_1866
MH M20 unassigned subfamily M20B unassigned peptidases MER0196782 Acfer_0066
MH M20 unassigned subfamily M20B unassigned peptidases MER0196892 Acfer_2043
MH M20 unassigned subfamily M20B unassigned peptidases MER0196894 Acfer_2073
MH M20 unassigned subfamily M20C unassigned peptidases MER0196794 Acfer_0296
MH M20 unassigned subfamily M20C unassigned peptidases MER0196875 Acfer_1749
MH M20 unassigned family M20D unassigned peptidases MER0196780 Acfer_0030
MH M20 unassigned family M20D unassigned peptidases MER0196790 Acfer_0267
MH M20 unassigned family M20D unassigned peptidases MER0196812 Acfer_0600
MH M20 unassigned family M20D unassigned peptidases MER0196851 Acfer_1321
MH M20 unassigned family M20D unassigned peptidases MER0196878 Acfer_1806
MH M20 unassigned family M20D unassigned peptidases MER0196890 Acfer_2008
MH M20 unassigned family M20D unassigned peptidases MER0196856
MH M20 unassigned family M20D unassigned peptidases MER0196879
MH M20 unassigned family M20 unassigned peptidases MER0196789 Acfer_0206
MH M20 unassigned family M20 unassigned peptidases MER0196791 Acfer_0276
MH M20 unassigned family M20 unassigned peptidases MER0196816 Acfer_0678
MH M20 unassigned family M20 unassigned peptidases MER0196819 Acfer_0791
MH M20 unassigned family M20 unassigned peptidases MER0196854 Acfer_1369
MH M20 unassigned family M20 unassigned peptidases MER0196887 Acfer_1993
MH M20 unassigned family M20 unassigned peptidases MER0196889 Acfer_2007
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0196820 Acfer_0806
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0196850 Acfer_1317
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0196852 mtaD Acfer_1329
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0196885 Acfer_1980
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0196886 Acfer_1991
MJ M38 unassigned family M38 unassigned peptidases MER0196785 Acfer_0136
MJ M38 unassigned family M38 unassigned peptidases MER0196880 hutI Acfer_1844
MM M50 unassigned subfamily M50B unassigned peptidases MER0196845 Acfer_1246
MM M50 unassigned subfamily M50B unassigned peptidases MER0196855 Acfer_1374
MO M23 M23.009 Mername-AA292 peptidase MER0388626
MO M23 unassigned subfamily M23B unassigned peptidases MER0196786 Acfer_0174
MQ M29 unassigned family M29 unassigned peptidases MER0196788 Acfer_0179
MQ M29 unassigned family M29 unassigned peptidases MER1258273
PA S1 unassigned subfamily S1C unassigned peptidases MER0196876
PA S55 non-peptidase homologue hypothetical protein Acid345_3562 MER0316259
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0196846 Acfer_1280
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0196832 Acfer_0925
PB C69 C69.001 dipeptidase A MER0196821 Acfer_0808
PB T3 T03.025 oxamate amidohydrolase proenzyme (Klebsiella pneumonia) MER0196891 Acfer_2041
PC C26 C26.952 dihydro-orotase (N-terminal unit) (Homo sapiens-type) MER0196849 Acfer_1316
PC C26 C26.959 TRP3 protein MER0196793 Acfer_0282
PC C26 C26.964 CTP synthetase MER0196869 pyrG Acfer_1622
PC C26 C26.965 imidazole glycerol phosphate synthase subunit HisH MER0196831 Acfer_0920
PC C26 C26.A21 LD42771 g.p. (Drosophila melanogaster) MER0196815 guaA Acfer_0670
PC C26 unassigned family C26 unassigned peptidases MER0196881 Acfer_1849
PC C26 unassigned family C26 unassigned peptidases MER0196893 Acfer_2061
PC C26 unassigned family C26 unassigned peptidases MER0196897 Acfer_2092
PC C56 C56.001 PfpI peptidase MER0196783
PC C56 C56.972 phosphoribosylformylglycinamidine synthase MER0196829 Acfer_0906
SB S8 unassigned subfamily S8A unassigned peptidases MER0196811 Acfer_0583
SC S9 S09.946 BSU33620 g.p. (Bacillus subtilis) and similar MER0196834 Acfer_0972
SC S9 S09.B04 BSU23640 g.p. (Bacillus subtilis) MER0196874 Acfer_1738
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0196810 Acfer_0520
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0196833 Acfer_0942
SC S9 unassigned subfamily S9C unassigned peptidases MER0196787 Acfer_0176
SC S9 unassigned family S9 unassigned peptidases MER0196797 Acfer_0370
SC S9 unassigned family S9 unassigned peptidases MER0196858 Acfer_1504
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0196840 Acfer_1071
SC S33 unassigned family S33 unassigned peptidases MER0196839 Acfer_1069
SC S33 unassigned family S33 unassigned peptidases MER0196888 Acfer_1997
SE S11 unassigned family S11 unassigned peptidases MER0196825 Acfer_0879
SE S11 unassigned family S11 unassigned peptidases MER0972068
SE S12 unassigned family S12 unassigned peptidases MER0196866 Acfer_1591
SF S24 S24.001 repressor LexA MER0196835 lexA Acfer_1012
SF S26 unassigned subfamily S26A unassigned peptidases MER0196805 Acfer_0473
SJ S16 S16.001 Lon-A peptidase MER0196809 Acfer_0506
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0196826 Acfer_0893
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER0196806 Acfer_0477
SK S14 S14.001 peptidase Clp (type 1) MER0196808 clpP Acfer_0504
SK S41 S41.004 C-terminal processing peptidase-3 MER0196814
U- U32 U32.002 collagenase (Helicobacter-type) MER0196827 Acfer_0900
U- U32 unassigned family U32 unassigned peptidases MER0196847 Acfer_1284
U- U32 unassigned family U32 unassigned peptidases MER0196848 Acfer_1284

GENOME ANALYSIS: Comparison with 28 completely sequenced genomes from family Veillonellaceae
Family Comment
C1 significant presence (1 homologues)
C69 significant presence (1 homologues)
M15 significant presence (1 homologues)
M20 lineage specific expansion (26 homologues)
M32 significant presence (1 homologues)
M48 lineage specific expansion (5 homologues)
M61 significant presence (1 homologues)
S8 significant presence (1 homologues)
S9 significant presence (7 homologues)
S12 significant presence (1 homologues)
S33 significant presence (3 homologues)
T3 significant presence (1 homologues)

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Page created 26-April-2019

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