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Atopobium vaginae

Taxonomy
Taxonomy database identifier: 82135
Superkingdom Bacteria
Phylum Firmicutes
Class Actinobacteria
Subclass Coriobacteridae
Order Coriobacteriales
Suborder Coriobacterineae
Family Coriobacteriaceae
Genus Atopobium
Species vaginae
Peptidase View peptidase sequences from Atopobium vaginae
Count of known and putative peptidases: 39, non-peptidase homologues 5
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AC A8 unassigned family A8 unassigned peptidases MER0336812 lspA HMPREF9248_0083
AC A8 unassigned family A8 unassigned peptidases MER0322093 lspA HMPREF0091_10641
AD A24 non-peptidase homologue subfamily A24A non-peptidase homologues MER0692796 HMPREF9248_0201
AD A24 unassigned subfamily A24A unassigned peptidases MER0627909 HMPREF0091_10026
CA C1 C01.086 aminopeptidase C MER0293352 HMPREF9248_0845
CA C1 C01.086 aminopeptidase C MER0293341 HMPREF0091_11197
CA C1 unassigned subfamily C1B unassigned peptidases MER0237636
CA C1 unassigned subfamily C1B unassigned peptidases MER0238737 HMPREF9248_0779
CA C1 unassigned subfamily C1B unassigned peptidases MER1166944
CA C1 unassigned subfamily C1B unassigned peptidases MER0428621
CA C1 unassigned subfamily C1B unassigned peptidases MER0428662
CF C15 C15.001 pyroglutamyl-peptidase I (prokaryote) MER0233159 pcp HMPREF9248_0220
CL C60 unassigned subfamily C60B unassigned peptidases MER0300097
CL C60 unassigned subfamily C60B unassigned peptidases MER0300055
CL C82 C82.001 L,D-transpeptidase (Enterococcus-type) MER0186491
CL C82 unassigned subfamily C82A unassigned peptidases MER0321863
CO C40 non-peptidase homologue family C40 non-peptidase homologues MER0721872 HMPREF0091_10940
CO C40 non-peptidase homologue family C40 non-peptidase homologues MER0378219 HMPREF9248_0001
CO C40 unassigned family C40 unassigned peptidases MER0377901 HMPREF9248_0166
CO C40 unassigned family C40 unassigned peptidases MER0454081
G- G5 unassigned family G5 unassigned peptidases MER0911298 HMPREF9248_0208
G- G5 unassigned family G5 unassigned peptidases MER0935811 HMPREF0091_10033
MA M1 M01.002 lysyl aminopeptidase (bacteria) MER0334209 pepN HMPREF9248_0309
MA M1 M01.002 lysyl aminopeptidase (bacteria) MER0334242 HMPREF0091_10375
MA M32 unassigned family M32 unassigned peptidases MER0232465 HMPREF9248_0882
MA M32 unassigned family M32 unassigned peptidases MER0190498 HMPREF0091_10405
MA M41 unassigned family M41 unassigned peptidases MER0362459 hflB HMPREF9248_1199
MA M41 unassigned family M41 unassigned peptidases MER0363694 hflB HMPREF9248_0070
MA M41 unassigned family M41 unassigned peptidases MER0362321 ftsH HMPREF0091_11092
MA M41 unassigned family M41 unassigned peptidases MER0363753 ftsH HMPREF0091_11000
ME M16 unassigned subfamily M16C unassigned peptidases MER0233705
ME M16 unassigned subfamily M16C unassigned peptidases MER0236708 HMPREF9248_0513
MG M24 unassigned subfamily M24A unassigned peptidases MER0483834 map
MG M24 unassigned subfamily M24A unassigned peptidases MER0394829 map HMPREF0091_10277
MG M24 unassigned subfamily M24B unassigned peptidases MER0481035
MG M24 unassigned subfamily M24B unassigned peptidases MER0481024
MH M20 non-peptidase homologue subfamily M20A non-peptidase homologues MER0824421 HMPREF9248_0473
MH M20 unassigned subfamily M20B unassigned peptidases MER0370745 pepT HMPREF9248_0893
MH M20 unassigned subfamily M20B unassigned peptidases MER0370726 pepT HMPREF0091_10559
MH M20 unassigned family M20D unassigned peptidases MER0373824 HMPREF9248_0847
MH M20 unassigned family M20D unassigned peptidases MER0373789 HMPREF0091_11194
MH M20 unassigned family M20 unassigned peptidases MER0848429 HMPREF9248_0020
MH M20 unassigned family M20 unassigned peptidases MER0473901
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0870111 pyrC
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0874690 nagA
MM M50 non-peptidase homologue subfamily M50B non-peptidase homologues MER0891951 HMPREF9248_0796
MM M50 non-peptidase homologue subfamily M50B non-peptidase homologues MER0894089 HMPREF9248_1067
MM M50 non-peptidase homologue subfamily M50B non-peptidase homologues MER0894103 HMPREF0091_10984
MM M50 unassigned subfamily M50B unassigned peptidases MER0894259 HMPREF0091_10750
PA S1 unassigned subfamily S1C unassigned peptidases MER0408359 htrA
PA S1 unassigned subfamily S1E unassigned peptidases MER0964735 HMPREF9248_1100
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0456382 purF
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0456583 purF
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0456383 glmS
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0456582 glmS
PB C69 C69.001 dipeptidase A MER0237482 HMPREF0091_10023
PB C69 C69.001 dipeptidase A MER0276694 pepDA2 HMPREF0091_10631
PB C69 unassigned family C69 unassigned peptidases MER0238519 HMPREF9248_0300
PB C69 unassigned family C69 unassigned peptidases MER0313708 pepD HMPREF9248_1243
PC C26 C26.957 GMP synthase MER0442334 guaA
PC C26 C26.957 GMP synthase MER0442820
PC C26 C26.959 TRP3 protein MER0436355
PC C26 C26.959 TRP3 protein MER0436427
PC C26 C26.964 CTP synthetase MER0451672 pyrG
PC C26 C26.964 CTP synthetase MER0451154
PC C26 unassigned family C26 unassigned peptidases MER0447636
PC C26 unassigned family C26 unassigned peptidases MER0449057 pdxT
PC C26 unassigned family C26 unassigned peptidases MER0448271 trpD2
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0892164 HMPREF9248_0251
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0385873 HMPREF0091_10017
SC S10 unassigned family S10 unassigned peptidases MER0490507
SC S10 unassigned family S10 unassigned peptidases MER0490521
SC S33 unassigned family S33 unassigned peptidases MER0381189 pepI HMPREF0091_10906
SE S11 unassigned family S11 unassigned peptidases MER0949359 HMPREF9248_0462
SE S11 unassigned family S11 unassigned peptidases MER0981252 HMPREF9248_0588
SE S11 unassigned family S11 unassigned peptidases MER0983379 HMPREF9248_1260
SE S11 unassigned family S11 unassigned peptidases MER0968651 HMPREF0091_10248
SE S11 unassigned family S11 unassigned peptidases MER0949275 HMPREF0091_10065
SE S11 unassigned family S11 unassigned peptidases MER0948413 HMPREF0091_10123
SE S11 unassigned family S11 unassigned peptidases MER0353031 HMPREF9248_0021
SE S12 unassigned family S12 unassigned peptidases MER0420280
SF S24 S24.001 repressor LexA MER0304531 lexA HMPREF9248_0158
SF S24 S24.001 repressor LexA MER0285326 lexA HMPREF0091_10731
SF S24 unassigned family S24 unassigned peptidases MER1330005
SF S26 S26.024 signal peptidase (Mycobacterium tuberculosis-type) MER0247022 lepB HMPREF9248_0178
SF S26 S26.024 signal peptidase (Mycobacterium tuberculosis-type) MER0246864 lepB HMPREF0091_11037
SK S14 S14.001 peptidase Clp (type 1) MER0491599 clpP
SK S14 S14.001 peptidase Clp (type 1) MER0358329 clpP HMPREF0091_10490
U- U32 unassigned family U32 unassigned peptidases MER0233428
U- U32 unassigned family U32 unassigned peptidases MER0403764

GENOME ANALYSIS: Comparison with 17 completely sequenced genomes from order Coriobacteriales
Family Comment
C1 lineage specific expansion (7 homologues)
C26 lineage specific expansion (9 homologues)
C69 lineage specific expansion (4 homologues)
M1 significant presence (2 homologues)
M41 lineage specific expansion (4 homologues)
M50 lineage specific expansion (4 homologues)
S11 lineage specific expansion (7 homologues)

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Page created 8-September-2023

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