Atopobium parvulum

Taxonomy
Taxonomy database identifier: 1382
Superkingdom Bacteria
Phylum Firmicutes
Class Actinobacteria
Subclass Coriobacteridae
Order Coriobacteriales
Suborder Coriobacterineae
Family Coriobacteriaceae
Genus Atopobium
Species parvulum
Peptidase View peptidase sequences from Atopobium parvulum
Count of known and putative peptidases: 45, non-peptidase homologues 20
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AC A8 unassigned family A8 unassigned peptidases MER0127218
AD A24 unassigned subfamily A24A unassigned peptidases MER0127260
CA C1 C01.086 aminopeptidase C MER0127227 Apar_0899
CA C1 unassigned subfamily C1B unassigned peptidases MER0127228 Apar_0900
CF C15 C15.001 pyroglutamyl-peptidase I (prokaryote) MER0127262 pcp Apar_0340
CL C60 C60.007 sortase C1 (Streptococcus sp.) MER0127241
CL C60 unassigned subfamily C60B unassigned peptidases MER0127245
CL C82 unassigned subfamily C82A unassigned peptidases MER0127226
CL C82 unassigned subfamily C82A unassigned peptidases MER0127220
CO C40 unassigned family C40 unassigned peptidases MER0127280
G- G5 unassigned family G5 unassigned peptidases MER0127224
G- G5 unassigned family G5 unassigned peptidases MER0127247
MA M3 unassigned subfamily M3B unassigned peptidases MER0127239 Apar_1205
MA M32 unassigned family M32 unassigned peptidases MER0127261 Apar_0317
MA M41 unassigned family M41 unassigned peptidases MER0127219
ME M16 unassigned subfamily M16C unassigned peptidases MER0127265
MG M24 unassigned subfamily M24A unassigned peptidases MER0127237
MG M24 unassigned subfamily M24B unassigned peptidases MER0127269
MH M18 unassigned family M18 unassigned peptidases MER0127266
MH M18 unassigned family M18 unassigned peptidases MER0127271 Apar_0506
MH M18 unassigned family M18 unassigned peptidases MER1154434
MH M20 unassigned subfamily M20A unassigned peptidases MER0127258 Apar_0240 Apar_0240
MH M20 unassigned subfamily M20A unassigned peptidases MER0852010 Apar_0748
MH M20 unassigned subfamily M20A unassigned peptidases MER0127264
MH M20 unassigned subfamily M20B unassigned peptidases MER0127231
MH M20 unassigned subfamily M20B unassigned peptidases MER0127249
MH M20 unassigned family M20 unassigned peptidases MER0127256
MH M42 unassigned family M42 unassigned peptidases MER0127230 Apar_0952
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0127234
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0127242
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0127257
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0127259
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0127285
MM M50 unassigned subfamily M50A unassigned peptidases MER0127277
MM M50 unassigned subfamily M50B unassigned peptidases MER0127278
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0127281
MQ M29 non-peptidase homologue family M29 non-peptidase homologues MER1257305
MQ M29 unassigned family M29 unassigned peptidases MER0127244 Apar_1352
PA S1 unassigned subfamily S1C unassigned peptidases MER0127268
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0127246
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0127253
PC C26 C26.957 GMP synthase MER0127252
PC C26 C26.964 CTP synthetase MER0127270
PC C26 unassigned family C26 unassigned peptidases MER0127273 carA Apar_0612
PC C26 unassigned family C26 unassigned peptidases MER0127232 Apar_0954
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0127263
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0127236 Apar_1118
PC S51 unassigned family S51 unassigned peptidases MER0127254 Apar_0218
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0127255
SC S9 unassigned subfamily S9C unassigned peptidases MER0127267
SC S9 unassigned family S9 unassigned peptidases MER0127229
SC S9 unassigned family S9 unassigned peptidases MER0127240
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0127248
SC S33 unassigned family S33 unassigned peptidases MER0127225
SE S11 S11.004 K15-type DD-transpeptidase MER0127279
SE S12 unassigned family S12 unassigned peptidases MER0127238 Apar_1201
SF S24 S24.001 repressor LexA MER0127284 lexA Apar_0770
SF S24 unassigned family S24 unassigned peptidases MER0127272
SF S26 S26.024 signal peptidase (Mycobacterium tuberculosis-type) MER0127275 Apar_0692
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER0127276
SK S14 S14.001 peptidase Clp (type 1) MER0127274
U- U32 unassigned family U32 unassigned peptidases MER0127233 Apar_0995

GENOME ANALYSIS: Comparison with 17 completely sequenced genomes from order Coriobacteriales
Family Comment
M38 lineage specific expansion (5 homologues)
S51 significant decrease in homologues (1 homologues)