Flavobacterium psychrophilum

Taxonomy
Taxonomy database identifier: 96345
Superkingdom Bacteria
Phylum Bacteroidetes
Class Flavobacteria
Order Flavobacteriales
Family Flavobacteriaceae
Genus Flavobacterium
Species psychrophilum
Peptidase View peptidase sequences from Flavobacterium psychrophilum
Count of known and putative peptidases: 62, non-peptidase homologues 12
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AC A8 unassigned family A8 unassigned peptidases MER0005117 lspA/SU65_01160 FP0219
CA C1 unassigned subfamily C1A unassigned peptidases MER0106102 pepC FP2369
CA C1 unassigned subfamily C1B unassigned peptidases MER1167366
CA C1 unassigned subfamily C1B unassigned peptidases MER1167429
CA C10 unassigned family C10 unassigned peptidases MER1169382
CA C10 unassigned family C10 unassigned peptidases MER1169360
CA C39 C39.001 bacteriocin-processing peptidase MER0143747 FP1877
CA C39 non-peptidase homologue family C39 non-peptidase homologues MER0716928 FPSM_00457
CA C39 non-peptidase homologue family C39 non-peptidase homologues MER0716414 SU65_08080
CA C39 non-peptidase homologue family C39 non-peptidase homologues MER0713240 SU65_09440
CD C25 unassigned family C25 unassigned peptidases MER0435742 porU FP1388
CO C40 C40.009 NLP/P60 (Nostoc punctiforme)-like putative peptidase MER0124777 FP0769
CO C40 unassigned family C40 unassigned peptidases MER0453114
G- G5 unassigned family G5 unassigned peptidases MER0936946 FPSM_01212/SU65_05090
MA M1 unassigned family M1 unassigned peptidases MER0464812 FP1004
MA M1 unassigned family M1 unassigned peptidases MER0335288 FP1008
MA M1 unassigned family M1 unassigned peptidases MER0464813 FP1888
MA M1 unassigned family M1 unassigned peptidases MER0464814 FP2127
MA M1 unassigned family M1 unassigned peptidases MER0464815 FP2397
MA M3 unassigned subfamily M3A unassigned peptidases MER0108140 dcp1 FP1364
MA M3 unassigned subfamily M3A unassigned peptidases MER0103246 dcp2 FP1883
MA M4 unassigned family M4 unassigned peptidases MER1192037
MA M106 M106.001 FP0506 g.p. (Flavobacterium psychrophilum) MER1383495 FP0506
MA M106 M106.UPW family M106 unassigned peptidases MER1376456
MA M106 M106.UPW family M106 unassigned peptidases MER1376451
MA M13 unassigned family M13 unassigned peptidases MER1226819
MA M13 unassigned family M13 unassigned peptidases MER0006109 pepO FP0086
MA M36 unassigned family M36 unassigned peptidases MER0107911 FP0281
MA M36 unassigned family M36 unassigned peptidases MER0004838 FP0280
MA M41 M41.007 Afg3-like protein 2 MER0169560 ftsH FP0603
MA M43 M43.001 cytophagalysin MER0882522 PAPPA
MA M43 M43.001 cytophagalysin MER0882128 FPSM_01025/H633G_08158
MA M43 M43.007 ulilysin (Methanosarcina acetivorans) MER0004883 fpp2 FP0232
MA M43 unassigned subfamily M43A unassigned peptidases MER0138873 FP1024
MA M43 unassigned subfamily M43B unassigned peptidases MER0139455 FP1619
MA M48 unassigned subfamily M48C unassigned peptidases MER0886594 FPSM_00335/yggG
MA M56 unassigned family M56 unassigned peptidases MER0935055 FP1750
MA M61 unassigned family M61 unassigned peptidases MER0141098 FP0910
MA M90 unassigned family M90 unassigned peptidases MER0906638 FPSM_00741/SU65_07285
MC M14 non-peptidase homologue subfamily M14D non-peptidase homologues MER0469064 FP0842
MD M15 unassigned subfamily M15D unassigned peptidases MER0188649 ddpX FP1623
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0169760 FP0891
ME M16 unassigned family M16 unassigned peptidases MER0169759 FP0891
MG M24 unassigned subfamily M24A unassigned peptidases MER0121113 map FP0419
MG M24 unassigned subfamily M24B unassigned peptidases MER0005558 pepP FP0153
MH M20 M20.003 peptidase T MER0105392 pepT FP1919
MH M20 unassigned subfamily M20C unassigned peptidases MER0100483 pepD FP1929
MH M20 unassigned subfamily M20F unassigned peptidases MER0005748 FP0150
MH M28 unassigned subfamily M28B unassigned peptidases MER0667259
MH M28 unassigned subfamily M28B unassigned peptidases MER0105944 FP0650
MH M28 unassigned subfamily M28D unassigned peptidases MER0108079 FP0480
MH M28 unassigned subfamily M28E unassigned peptidases MER1071252
MH M42 unassigned family M42 unassigned peptidases MER0169924 FP1078
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0865178 hutI
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0005516 pyrC1 FP0164
MM M50 unassigned family M50 unassigned peptidases MER0012154 FP0081
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0005059 FP0229
MO M23 unassigned subfamily M23B unassigned peptidases MER0140300 FP1942
MO M23 unassigned subfamily M23B unassigned peptidases MER0478670 FP1143
MS M75 unassigned family M75 unassigned peptidases MER0123853 FP1478
PA S1 unassigned subfamily S1B unassigned peptidases MER0407427 degQ FP1216
PA S1 unassigned subfamily S1D unassigned peptidases MER1275112
PA S46 S46.002 dipeptidyl-peptidase 11 (Porphyromonas gingivalis-type) MER0109496 FP0382
PA S46 S46.002 dipeptidyl-peptidase 11 (Porphyromonas gingivalis-type) MER0109641 FP1355
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0005771 glmS FP0111
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0457979 asnB FP0526
PB C44 unassigned family C44 unassigned peptidases MER0005382 purF FP0196
PB C44 unassigned family C44 unassigned peptidases MER0457980 asnB FP1997
PB C45 unassigned family C45 unassigned peptidases MER0725151 FPSM_02374/IA01_11180/SU65_09125
PB S45 S45.003 cephalosporin C acylase precursor MER0109497 pac FP2213
PB T2 unassigned family T2 unassigned peptidases MER1095219 FP1109/FPSM_02024
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER0107352 ggt FP1721
PC C26 C26.965 imidazole glycerol phosphate synthase subunit HisH MER0444489 hisH FP0956
PC C26 C26.A25 trp1 (Schizosaccharomyces pombe) MER0438762 pabA FP0512
PC C26 unassigned family C26 unassigned peptidases MER0442511 carA FP1311
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0169658 FP0764
PC S51 S51.002 alpha-aspartyl dipeptidase (eukaryote) MER0125083 pepE FP2130
PC S51 non-peptidase homologue family S51 non-peptidase homologues MER1050957 FPSM_02025
SB S8 unassigned subfamily S8A unassigned peptidases MER0242580
SB S8 unassigned subfamily S8A unassigned peptidases MER0191827 FP1763
SB S8 unassigned subfamily S8A unassigned peptidases MER0170225 FP2396
SB S8 unassigned subfamily S8B unassigned peptidases MER1290737
SB S8 unassigned subfamily S8B unassigned peptidases MER1290609
SB S8 unassigned subfamily S8B unassigned peptidases MER1290826
SC S9 S09.010 oligopeptidase B MER0126332 ptrB FP0870
SC S9 S09.013 dipeptidyl-peptidase 4 (bacteria-type 2) MER0139538 pepX1 FP2339
SC S9 S09.017 prolyl tripeptidyl peptidase MER0144565 pepX2 FP1112
SC S9 S09.075 dipeptidyl-peptidase 5 (Porphyromonas sp.) MER0123854 pop FP2368
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0212724 FP1221
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0213082 FP1717
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0212872 FP1756
SC S9 unassigned subfamily S9A unassigned peptidases MER1293672
SC S9 unassigned subfamily S9B unassigned peptidases MER1000328 FPSM_02154
SC S9 unassigned subfamily S9B unassigned peptidases MER1299622
SC S9 unassigned subfamily S9B unassigned peptidases MER1296598
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER1025421 FPSM_02027
SC S33 S33.010 SCO7095-type peptidase MER0005535 FP0154
SC S33 unassigned family S33 unassigned peptidases MER0004844 metX FP0256
SC S33 unassigned family S33 unassigned peptidases MER0209159 FP0539
SE S12 unassigned family S12 unassigned peptidases MER1006269 SU65_11410
SE S12 unassigned family S12 unassigned peptidases MER1005542 SU65_12145
SE S12 unassigned family S12 unassigned peptidases MER0119031 FP0289
SE S12 unassigned family S12 unassigned peptidases MER0144678 FP0482
SE S12 unassigned family S12 unassigned peptidases MER0125461 FP2182
SE S12 unassigned family S12 unassigned peptidases MER0420161 FP0758
SE S12 unassigned family S12 unassigned peptidases MER0421849 FP1416
SE S12 unassigned family S12 unassigned peptidases MER0421850 FP2390
SF S24 unassigned family S24 unassigned peptidases MER1041152 FPSM_00428
SF S26 unassigned subfamily S26A unassigned peptidases MER0107667 lepB FP1127
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER1031674 FPSM_01202/SU65_05130
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER0005849 radA FP0104
SJ S16 unassigned family S16 unassigned peptidases MER0109015 lon FP1714
SK S14 S14.001 peptidase Clp (type 1) MER0116975 clpP FP2085
SK S41 S41.001 C-terminal processing peptidase-1 MER0105136 FP2333
SK S41 S41.004 C-terminal processing peptidase-3 MER0136994 FP0463
SK S41 non-peptidase homologue subfamily S41A non-peptidase homologues MER1056654 SU65_01130
SK S41 non-peptidase homologue subfamily S41A non-peptidase homologues MER1062166 SU65_08095
SK S41 non-peptidase homologue subfamily S41A non-peptidase homologues MER1057222 FP0886
SK S41 unassigned subfamily S41A unassigned peptidases MER1348304
SK S41 unassigned subfamily S41A unassigned peptidases MER1347161
SK S41 unassigned subfamily S41A unassigned peptidases MER0105137 prc FP2345
SK S41 unassigned subfamily S41A unassigned peptidases MER1347777
SK S49 non-peptidase homologue subfamily S49A unassigned non-peptidase homologues MER1069179 FP0808
SK S49 unassigned subfamily S49A unassigned peptidases MER1350597
SK S49 unassigned subfamily S49A unassigned peptidases MER1350524
SK S49 unassigned subfamily S49A unassigned peptidases MER1351697
SK S49 unassigned subfamily S49B unassigned peptidases MER0105078 sppA FP0399
SS S66 unassigned family S66 unassigned peptidases MER1084959 FPSM_00377/SU65_06060
SS S66 unassigned family S66 unassigned peptidases MER0012234 FP0058
ST S54 S54.025 At5g25752 rhomboid peptidase MER0109363 FP0862
ST S54 unassigned family S54 unassigned peptidases MER1077138 IA01_06470
ST S54 unassigned family S54 unassigned peptidases MER1075325 IA01_05460
ST S54 unassigned family S54 unassigned peptidases MER1076430 FPSM_02061
ST S54 unassigned family S54 unassigned peptidases MER1082563 FPSM_02261
ST S54 unassigned family S54 unassigned peptidases MER1078734 FPSM_02060
ST S54 unassigned family S54 unassigned peptidases MER1078955 SU65_01765
U- U32 U32.003 collagenase (Salmonella-type) MER0123877 ydcP FP1027
U- U32 unassigned family U32 unassigned peptidases MER0013398 yceA FP0022

GENOME ANALYSIS: Comparison with 25 completely sequenced genomes from genus Flavobacterium
Family Comment
C10 significant presence (2 homologues)
C26 significant decrease in homologues (3 homologues)
C39 lineage specific expansion (4 homologues)
C45 significant presence (1 homologues)
G5 significant presence (1 homologues)
M106 significant presence (3 homologues)
M75 significant presence (1 homologues)
M90 significant presence (1 homologues)
S15 significant presence (1 homologues)
S41 lineage specific expansion (9 homologues)
S49 lineage specific expansion (5 homologues)
S54 lineage specific expansion (7 homologues)
T2 significant presence (1 homologues)