Roseobacter sp. CCS2

Taxonomy
Taxonomy database identifier: 391593
Superkingdom		Bacteria
Phylum		Proteobacteria
Class		Alphaproteobacteria
Order		Rhodobacterales
Family		Rhodobacteraceae
Genus		Roseobacter
Species		sp. CCS2
Peptidase			View peptidase sequences from Roseobacter sp. CCS2
Count of known and putative peptidases: 47, non-peptidase homologues 18
Completely sequences genomes from subspecies and strains				Protein coding genes
	To show all strains with completely sequenced genomes, click here.

Clan	Family	MEROPS ID	Peptidase or homologue (subtype)	MERNUM	Gene	Locus
AA	A32	A32.002	RC1339 g.p. (Rickettsia conorii)	MER0241713		RCCS2_01299
AC	A8	unassigned	family A8 unassigned peptidases	MER0401547	lspA	RCCS2_10915
CL	C82	C82.003	ykuD transpeptidase	MER0463506		RCCS2_06539
CL	C82	C82.003	ykuD transpeptidase	MER0463508
CL	C82	C82.A01	LdtF protein (Escherichia coli)	MER0244066
CL	C82	unassigned	subfamily C82A unassigned peptidases	MER0463507
CO	C40	C40.001	dipeptidyl-peptidase VI (bacteria)	MER0138546		RCCS2_12124
CO	C40	unassigned	family C40 unassigned peptidases	MER0178843		RCCS2_01848
G-	G5	unassigned	family G5 unassigned peptidases	MER0935837	RCCS2_13734
GC	G4	non-peptidase homologue	family G4 non-peptidase homologues	MER0347694
MA	M1	M01.005	alanyl aminopeptidase (bacterial-type)	MER0165780		RCCS2_16064
MA	M3	unassigned	subfamily M3A unassigned peptidases	MER0103291		RCCS2_13439
MA	M3	unassigned	subfamily M3B unassigned peptidases	MER0138467		RCCS2_03454
MA	M8	non-peptidase homologue	family M8 non-peptidase homologues	MER0165627
MA	M10	unassigned	subfamily M10A unassigned peptidases	MER0122066		RCCS2_11959
MA	M32	unassigned	family M32 unassigned peptidases	MER0107613		RCCS2_00102
MA	M41	unassigned	family M41 unassigned peptidases	MER0105605	ftsH	RCCS2_05519
MD	M15	non-peptidase homologue	family M15 non-peptidase homologues	MER0179012
MD	M74	unassigned	family M74 unassigned peptidases	MER0123005		RCCS2_07889
ME	M16	M16.019	YMXG peptidase	MER0178940		RCCS2_10905
ME	M16	non-peptidase homologue	subfamily M16B non-peptidase homologues	MER0178895		RCCS2_10900
ME	M16	non-peptidase homologue	family M16 non-peptidase homologues	MER0126213		RCCS2_05354
ME	M16	non-peptidase homologue	family M16 non-peptidase homologues	MER0178894		RCCS2_10900
ME	M16	unassigned	subfamily M16B unassigned peptidases	MER0126212		RCCS2_05354
MF	M17	unassigned	family M17 unassigned peptidases	MER0105912		RCCS2_12119
MF	M17	unassigned	family M17 unassigned peptidases	MER0105911	pepA	RCCS2_01324
MG	M24	M24.001	methionyl aminopeptidase 1 (Escherichia-type)	MER0141690		RCCS2_07534
MG	M24	M24.009	aminopeptidase P1	MER0165723
MH	M20	non-peptidase homologue	subfamily M20A non-peptidase homologues	MER0851918	RCCS2_02635
MH	M20	unassigned	subfamily M20A unassigned peptidases	MER0474805
MH	M20	unassigned	subfamily M20A unassigned peptidases	MER0370470		RCCS2_08454
MH	M20	unassigned	family M20D unassigned peptidases	MER0372445		RCCS2_01389
MH	M20	unassigned	family M20D unassigned peptidases	MER0138725		RCCS2_02630
MH	M20	unassigned	subfamily M20F unassigned peptidases	MER0851534	RCCS2_16996
MH	M42	unassigned	family M42 unassigned peptidases	MER0105277		RCCS2_14899
MJ	M19	non-peptidase homologue	family M19 non-peptidase homologues	MER0119695		RCCS2_04469
MJ	M19	unassigned	family M19 unassigned peptidases	MER0144381		RCCS2_06219
MJ	M38	M38.982	urease	MER0866679	ureC
MJ	M38	non-peptidase homologue	family M38 non-peptidase homologues	MER0874748	RCCS2_14544
MM	M50	unassigned	subfamily M50B unassigned peptidases	MER0898330	RCCS2_00954
MO	M23	M23.009	Mername-AA292 peptidase	MER0189759		RCCS2_17056
MO	M23	non-peptidase homologue	subfamily M23B non-peptidase homologues	MER0479621
MQ	M29	M29.001	aminopeptidase T	MER0100556		RCCS2_04644
MU	M103	M103.001	TldD peptidase (Escherichia coli)	MER0178761
MU	M103	M103.UNW	family M103 non-peptidase homologues	MER0105788		RCCS2_10795
NB	N6	unassigned	family N6 unassigned peptide lyases	MER0405267
PA	S1	S01.260	B1598 peptidase	MER0210522
PA	S1	unassigned	subfamily S1C unassigned peptidases	MER0407878
PB	C44	C44.001	amidophosphoribosyltransferase precursor	MER0137324		RCCS2_16766
PB	C44	C44.003	glutamate synthase (NADPH) large chain	MER0458811
PB	C44	non-peptidase homologue	family C44 non-peptidase homologues	MER0179123
PB	S45	S45.003	cephalosporin C acylase precursor	MER0109206		RCCS2_00784
PB	T1	T01.006	HslV component of HslUV peptidase	MER0165320	hslV	RCCS2_09529
PB	T3	T03.001	gamma-glutamyltransferase 1 (bacterial-type)	MER0107513		RCCS2_15669
PB	T3	T03.025	oxamate amidohydrolase proenzyme (Klebsiella pneumonia)	MER0108163		RCCS2_06714
PC	C26	C26.955	aminodeoxychorismate synthase, subunit II	MER0436021
PC	C26	C26.957	GMP synthase	MER0444073
PC	C26	C26.964	CTP synthetase	MER0449624
PC	C26	unassigned	family C26 unassigned peptidases	MER0448974
PC	C26	unassigned	family C26 unassigned peptidases	MER0444668
PC	C26	unassigned	family C26 unassigned peptidases	MER0449941		RCCS2_16084
PC	C26	unassigned	family C26 unassigned peptidases	MER0441483
PC	C56	C56.001	PfpI peptidase	MER0139837		RCCS2_10190
PC	C56	non-peptidase homologue	family C56 non-peptidase homologues	MER0178974
PE	T5	T05.001	ornithine acetyltransferase precursor	MER0118891	argJ	RCCS2_09874
SB	S8	non-peptidase homologue	subfamily S8A non-peptidase homologues	MER1278211
SB	S8	unassigned	subfamily S8A unassigned peptidases	MER0143948		RCCS2_00497
SC	S9	S09.951	brefeldin A esterase	MER0209452		RCCS2_15449
SC	S9	unassigned	subfamily S9B unassigned peptidases	MER0996930	RCCS2_12049
SC	S9	unassigned	family S9 unassigned peptidases	MER0477798		RCCS2_01229
SC	S15	non-peptidase homologue	family S15 non-peptidase homologues	MER1020644	RCCS2_01229
SC	S33	S33.001	prolyl aminopeptidase	MER0100557		RCCS2_09809
SC	S33	non-peptidase homologue	family S33 non-peptidase homologues	MER0209777		RCCS2_07724
SC	S33	non-peptidase homologue	family S33 non-peptidase homologues	MER0215551
SC	S33	non-peptidase homologue	family S33 non-peptidase homologues	MER0214984
SC	S33	unassigned	family S33 unassigned peptidases	MER0210611		RCCS2_12014
SC	S33	unassigned	family S33 unassigned peptidases	MER0213080
SC	S33	unassigned	family S33 unassigned peptidases	MER0209221
SE	S11	unassigned	family S11 unassigned peptidases	MER0117262		RCCS2_04889
SE	S11	unassigned	family S11 unassigned peptidases	MER0143341		RCCS2_02815
SE	S12	unassigned	family S12 unassigned peptidases	MER1004462	RCCS2_05024
SE	S13	unassigned	family S13 unassigned peptidases	MER0105507		RCCS2_13484
SF	S24	S24.001	repressor LexA	MER0165849	lexA	RCCS2_17291
SF	S26	S26.001	signal peptidase I	MER0105278		RCCS2_06284
SH	S78	S78.001	prohead peptidase (bacteriophage HK97)	MER0276615		RCCS2_01903
SJ	S16	S16.001	Lon-A peptidase	MER0110038		RCCS2_16956
SJ	S16	S16.A04	DNA repair protein RadA (Escherichia coli)	MER0476080
SK	S14	S14.001	peptidase Clp (type 1)	MER0143663	clpP	RCCS2_03299
SK	S41	S41.004	C-terminal processing peptidase-3	MER0105179		RCCS2_06794
SK	S49	non-peptidase homologue	subfamily S49A unassigned non-peptidase homologues	MER1067146	RCCS2_17696
SK	S49	unassigned	subfamily S49B unassigned peptidases	MER0105789		RCCS2_07659
ST	S54	non-peptidase homologue	family S54 non-peptidase homologues	MER1077103	RCCS2_13364
ST	S54	unassigned	family S54 unassigned peptidases	MER1082581	RCCS2_04529

GENOME ANALYSIS: Comparison with 100 completely sequenced genomes from family Rhodobacteraceae
Family	Comment
G4	significant presence (1 homologues)
M8	significant presence (1 homologues)
M24	significant decrease in homologues (2 homologues)
M29	significant presence (1 homologues)