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Labrenzia aggregata

Taxonomy
Taxonomy database identifier: 187304
Superkingdom Bacteria
Phylum Proteobacteria
Class Alphaproteobacteria
Order Rhodobacterales
Family Rhodobacteraceae
Genus Labrenzia
Species aggregata
Peptidase View peptidase sequences from Labrenzia aggregata
Count of known and putative peptidases: 101, non-peptidase homologues 23
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AA A28 unassigned subfamily A28B unassigned peptidases MER0700015 SIAM614_04595
AA A32 unassigned family A32 unassigned peptidases MER0241802 SIAM614_04595
AA A32 unassigned family A32 unassigned peptidases MER0241801 SIAM614_12088
AC A8 unassigned family A8 unassigned peptidases MER0087339 lspA SIAM614_05948
AC A8 unassigned family A8 unassigned peptidases MER1155530
AD A24 unassigned subfamily A24B unassigned peptidases MER0087350 SIAM614_04655
AE A31 A31.002 HyaD peptidase MER0075067 SIAM614_29576
AE A31 A31.004 hoxW peptidase MER0427655
CA C1 unassigned subfamily C1A unassigned peptidases MER0087328 SIAM614_21040
CA C93 unassigned family C93 unassigned peptidases MER0391475 SIAM614_16617
CD C14 unassigned subfamily C14B unassigned peptidases MER0091534 SIAM614_12688
CD C14 unassigned subfamily C14B unassigned peptidases MER0137221 SIAM614_16517
CD C14 unassigned subfamily C14B unassigned peptidases MER0087352 SIAM614_06733
CD C14 unassigned subfamily C14B unassigned peptidases MER0172941 SIAM614_12698
CD C14 unassigned subfamily C14B unassigned peptidases MER0429418 SIAM614_12853
CD C14 unassigned subfamily C14B unassigned peptidases MER0429419 SIAM614_20066
CD C14 unassigned subfamily C14B unassigned peptidases MER0429420 SIAM614_16512
CD C14 unassigned subfamily C14B unassigned peptidases MER0429421 SIAM614_21902
CD C14 unassigned subfamily C14B unassigned peptidases MER0173392 SIAM614_21912
CD C14 unassigned subfamily C14B unassigned peptidases MER0087329 SIAM614_21917
CF C15 unassigned family C15 unassigned peptidases MER0087323 SIAM614_17264
CL C82 C82.003 ykuD transpeptidase MER0091086 SIAM614_08753 SIAM614_08753
CL C82 C82.003 ykuD transpeptidase MER0090972 SIAM614_24257
CL C82 C82.003 ykuD transpeptidase MER0090964 SIAM614_17759 SIAM614_17759
CL C82 C82.003 ykuD transpeptidase MER0090939 SIAM614_12293 SIAM614_06713
CL C82 C82.003 ykuD transpeptidase MER0076671 SIAM614_05768 SIAM614_05768
CL C82 C82.003 ykuD transpeptidase MER0090938 SIAM614_28472 SIAM614_28472
CL C82 C82.003 ykuD transpeptidase MER0076670 SIAM614_16872 SIAM614_16872
CL C82 C82.003 ykuD transpeptidase MER0076669 SIAM614_16697 SIAM614_16697
CL C82 unassigned subfamily C82A unassigned peptidases MER0090937 SIAM614_21832 SIAM614_21832
CL C82 unassigned subfamily C82A unassigned peptidases MER0461974 SIAM614_19229
CL C82 unassigned subfamily C82A unassigned peptidases MER0180913 SIAM614_06713
CL C82 unassigned subfamily C82A unassigned peptidases MER0243858 SIAM614_25447
CO C40 C40.001 dipeptidyl-peptidase VI (bacteria) MER0094118 SIAM614_04710
G- G5 unassigned family G5 unassigned peptidases MER0087325 SIAM614_25801
MA M1 M01.005 alanyl aminopeptidase (bacterial-type) MER0087362 SIAM614_09313
MA M3 unassigned subfamily M3A unassigned peptidases MER0093548 SIAM614_12638
MA M3 unassigned subfamily M3B unassigned peptidases MER0093549 SIAM614_23922
MA M10 unassigned family M10 unassigned peptidases MER0467023 SIAM614_03930
MA M41 M41.001 FtsH peptidase MER0075056 ftsH1 SIAM614_23607
MA M41 non-peptidase homologue family M41 non-peptidase homologues MER0875362 SIAM614_15547
MA M41 unassigned family M41 unassigned peptidases MER0075073 ftsH2 SIAM614_05351
MA M48 unassigned subfamily M48B unassigned peptidases MER0075057 htpX SIAM614_26908
MA M48 unassigned family M48 unassigned peptidases MER0882685 SIAM614_30046
MA M48 unassigned family M48 unassigned peptidases MER0087348 SIAM614_15430
MA M56 unassigned family M56 unassigned peptidases MER0933797 SIAM614_22797
MD M15 non-peptidase homologue family M15 non-peptidase homologues MER0171193 SIAM614_23932
MD M74 unassigned family M74 unassigned peptidases MER0087349 mepA SIAM614_04360
MD M74 unassigned family M74 unassigned peptidases MER1263029
ME M16 M16.019 YMXG peptidase MER0087338 SIAM614_05938
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0074598 SIAM614_05933
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0074597 SIAM614_05933
ME M16 unassigned subfamily M16B unassigned peptidases MER0087340 SIAM614_06208
ME M16 unassigned subfamily M16B unassigned peptidases MER0775684
MF M17 unassigned family M17 unassigned peptidases MER0087343 pepA SIAM614_11293
MF M17 unassigned family M17 unassigned peptidases MER0087351 SIAM614_04700
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0087321 SIAM614_16792
MG M24 M24.009 aminopeptidase P1 MER0087337 SIAM614_19476
MG M24 non-peptidase homologue family M24 non-peptidase homologues MER0087363 SIAM614_10008
MG M24 non-peptidase homologue family M24 non-peptidase homologues MER0087357 SIAM614_13963
MG M24 non-peptidase homologue family M24 non-peptidase homologues MER0079064 SIAM614_07738
MG M24 non-peptidase homologue family M24 non-peptidase homologues MER0093361 SIAM614_20955
MG M24 non-peptidase homologue family M24 non-peptidase homologues MER0093359 SIAM614_25182
MG M24 unassigned subfamily M24A unassigned peptidases MER0087326 SIAM614_25916
MG M24 unassigned subfamily M24B unassigned peptidases MER0087366 SIAM614_10578
MH M20 non-peptidase homologue subfamily M20D non-peptidase homologues MER0374011 SIAM614_30951
MH M20 non-peptidase homologue family M20 non-peptidase homologues MER0844629 SIAM614_14465
MH M20 unassigned subfamily M20A unassigned peptidases MER0091927 SIAM614_13968
MH M20 unassigned subfamily M20A unassigned peptidases MER0091931 SIAM614_31331
MH M20 unassigned subfamily M20A unassigned peptidases MER0079063 SIAM614_28881
MH M20 unassigned subfamily M20A unassigned peptidases MER0091928 SIAM614_07643
MH M20 unassigned subfamily M20A unassigned peptidases MER0474902
MH M20 unassigned family M20D unassigned peptidases MER0091929 SIAM614_20056
MH M20 unassigned family M20D unassigned peptidases MER0087324 SIAM614_28886
MH M20 unassigned family M20D unassigned peptidases MER0091930 SIAM614_25107
MH M20 unassigned subfamily M20F unassigned peptidases MER0832410 SIAM614_17239
MH M20 unassigned family M20 unassigned peptidases MER0848703 SIAM614_31096
MH M42 non-peptidase homologue family M42 non-peptidase homologues MER0879131 SIAM614_16732
MH M42 unassigned family M42 unassigned peptidases MER0093388 SIAM614_04375
MJ M19 unassigned family M19 unassigned peptidases MER0093755 SIAM614_08748
MJ M38 M38.982 urease MER0859041 ureC
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0868993 SIAM614_02581
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0863318 SIAM614_02596
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0874206 hutI
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0864087 SIAM614_29761
MM M50 unassigned subfamily M50B unassigned peptidases MER0087344 SIAM614_15105
MO M23 M23.009 Mername-AA292 peptidase MER0093362 SIAM614_15395
MO M23 M23.951 DipM g.p. (Caulobacter sp.) MER0087356 SIAM614_13783
MO M23 unassigned subfamily M23B unassigned peptidases MER0087359 SIAM614_24537
MO M23 unassigned subfamily M23B unassigned peptidases MER0093364 SIAM614_12718
MS M75 M75.001 imelysin MER0078040 SIAM614_26521
MT M81 unassigned family M81 unassigned peptidases MER0223269 SIAM614_13463
MT M81 unassigned family M81 unassigned peptidases MER0223270 SIAM614_28911
MU M103 M103.UNW family M103 non-peptidase homologues MER0075066 SIAM614_06088
NB N6 N06.001 YscU protein MER0326823
NB N6 N06.A01 FlhB protein (Escherichia coli) MER0327176
NB N6 N06.A01 FlhB protein (Escherichia coli) MER0405568 flhB
PA S1 S01.260 B1598 peptidase MER0087334 SIAM614_16497
PA S1 unassigned subfamily S1B unassigned peptidases MER0217606 SIAM614_18299
PA S1 unassigned subfamily S1C unassigned peptidases MER0087333 SIAM614_16037
PA S1 unassigned subfamily S1C unassigned peptidases MER0087336 SIAM614_19371
PA S1 unassigned subfamily S1C unassigned peptidases MER0087361 SIAM614_09283 SIAM614_09283
PA S1 unassigned subfamily S1C unassigned peptidases MER1273535
PA S1 unassigned subfamily S1C unassigned peptidases MER0216837
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0075709 SIAM614_11168
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0458789
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0074887 SIAM614_14665
PB C44 unassigned family C44 unassigned peptidases MER0458790
PB C59 unassigned family C59 unassigned peptidases MER0093682 SIAM614_26126
PB T1 T01.006 HslV component of HslUV peptidase MER0087342 hslV SIAM614_02851
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER0091282 SIAM614_25562
PB T3 T03.014 gamma-glutamyltransferase 2 (bacterial) MER0091284 SIAM614_01686
PB T3 T03.025 oxamate amidohydrolase proenzyme (Klebsiella pneumonia) MER0091281 SIAM614_26668
PB T3 non-peptidase homologue family T3 non-peptidase homologues MER1098518 SIAM614_31006
PB T3 unassigned family T3 unassigned peptidases MER0091283 SIAM614_29406
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0439947
PC C26 C26.957 GMP synthase MER0443984 guaA
PC C26 C26.964 CTP synthetase MER0451108
PC C26 C26.965 imidazole glycerol phosphate synthase subunit HisH MER0445270
PC C26 unassigned family C26 unassigned peptidases MER0450212 SIAM614_24187
PC C26 unassigned family C26 unassigned peptidases MER0449587
PC C26 unassigned family C26 unassigned peptidases MER0449015 SIAM614_05698
PC C26 unassigned family C26 unassigned peptidases MER0441003
PC C26 unassigned family C26 unassigned peptidases MER0449724
PC C56 C56.A06 DDB_G0276405 (Dictyostelium discoideum) MER0075708 SIAM614_19204
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0171147 SIAM614_10808
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0171880
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0172025
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0181112
PE P1 P01.001 DmpA aminopeptidase MER0079062 SIAM614_01681
PE P1 unassigned family P01 unassigned peptidases MER0087347 SIAM614_15360
PE T5 T05.001 ornithine acetyltransferase precursor MER0091280 argJ SIAM614_24662
SB S8 unassigned subfamily S8A unassigned peptidases MER0087358 SIAM614_24147
SC S9 S09.010 oligopeptidase B MER0087322 SIAM614_17072
SC S9 non-peptidase homologue subfamily S9B non-peptidase homologues MER1002720 SIAM614_12618
SC S9 unassigned subfamily S9C unassigned peptidases MER0478403 SIAM614_13623
SC S9 unassigned family S9 unassigned peptidases MER0210363
SC S9 unassigned family S9 unassigned peptidases MER0479938
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER1023826 SIAM614_13623
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER1022348 SIAM614_30981
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0215449
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0214427
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0208797
SC S33 unassigned family S33 unassigned peptidases MER0074822 SIAM614_01831
SC S33 unassigned family S33 unassigned peptidases MER0212662
SC S33 unassigned family S33 unassigned peptidases MER0209538
SE S11 non-peptidase homologue family S11 non-peptidase homologues MER0075707 SIAM614_14380
SE S11 unassigned family S11 unassigned peptidases MER0947886 SIAM614_09023
SE S11 unassigned family S11 unassigned peptidases MER0950462 SIAM614_02606
SE S11 unassigned family S11 unassigned peptidases MER0075074 SIAM614_15692
SE S11 unassigned family S11 unassigned peptidases MER0087330 SIAM614_27173
SE S11 unassigned family S11 unassigned peptidases MER0087335 SIAM614_19256
SE S12 unassigned family S12 unassigned peptidases MER1004925 SIAM614_19416
SE S12 unassigned family S12 unassigned peptidases MER0074886 SIAM614_22612
SE S12 unassigned family S12 unassigned peptidases MER1310325
SF S24 S24.001 repressor LexA MER0075075 lexA SIAM614_15050
SF S26 S26.001 signal peptidase I MER0087365 SIAM614_10313
SF S26 non-peptidase homologue subfamily S26A non-peptidase homologues MER0087364 SIAM614_10293
SJ S16 S16.001 Lon-A peptidase MER0087345 SIAM614_15305
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER1037229 SIAM614_11178
SJ S16 unassigned family S16 unassigned peptidases MER1326662
SK S14 S14.001 peptidase Clp (type 1) MER0087346 clpP1 SIAM614_15320
SK S14 non-peptidase homologue family S14 non-peptidase homologues MER0087355 SIAM614_13038
SK S14 unassigned family S14 unassigned peptidases MER0087332 clpP2 SIAM614_15757
SK S41 S41.004 C-terminal processing peptidase-3 MER0087353 SIAM614_07833
SK S49 non-peptidase homologue subfamily S49A unassigned non-peptidase homologues MER0087320 SIAM614_03648
SK S49 non-peptidase homologue subfamily S49C non-peptidase homologues MER1071508 SIAM614_13038
SK S49 unassigned subfamily S49B unassigned peptidases MER0087319 SIAM614_03498
SK S49 unassigned subfamily S49B unassigned peptidases MER0087341 SIAM614_06548
SK S49 unassigned subfamily S49B unassigned peptidases MER1353995
ST S54 S54.027 RhoII peptidase (Haloferax volcanii) and similar MER0075706 SIAM614_27133
ST S54 unassigned family S54 unassigned peptidases MER1075517 SIAM614_16597

GENOME ANALYSIS: Comparison with 100 completely sequenced genomes from family Rhodobacteraceae
Family Comment
A28 significant presence (1 homologues)
A31 significant presence (2 homologues)
C1 significant presence (1 homologues)
C14 lineage specific expansion (10 homologues)
C15 significant presence (1 homologues)
C59 significant presence (1 homologues)
C93 significant presence (1 homologues)

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Page created 8-September-2023

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