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Marinomonas sp. MED121

Taxonomy
Taxonomy database identifier: 314277
Superkingdom Bacteria
Phylum Proteobacteria
Class Gammaproteobacteria
Order Oceanospirillales
Family Oceanospirillaceae
Genus Marinomonas
Species sp. MED121
Peptidase View peptidase sequences from Marinomonas sp. MED121
Count of known and putative peptidases: 52, non-peptidase homologues 28
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AC A8 unassigned family A8 unassigned peptidases MER0063081 lspA MED121_24059
AD A24 A24.003 type 4 prepilin peptidase 2 MER0174365 MED121_21585
CA C39 non-peptidase homologue family C39 non-peptidase homologues MER0716009 MED121_22307
CA C93 unassigned family C93 unassigned peptidases MER0394902
MA M1 M01.005 alanyl aminopeptidase (bacterial-type) MER0083464 MED121_12120
MA M3 M03.004 oligopeptidase A MER0083460 MED121_10030
MA M3 unassigned family M3 unassigned peptidases MER0063849 MED121_00585
MA M4 M04.016 PA peptidase (Aeromonas-type) MER0139826 MED121_23104
MA M6 M06.002 PrtV peptidase MER0065723 MED121_17664
MA M12 unassigned family M12 unassigned peptidases MER0467558 MED121_08453
MA M32 unassigned family M32 unassigned peptidases MER0083458 MED121_21265
MA M41 M41.001 FtsH peptidase MER0105475 ftsH MED121_07655
MA M48 M48.002 HtpX peptidase MER0138190 MED121_02520
MA M48 unassigned family M48 unassigned peptidases MER0063087 MED121_17624
MC M14 non-peptidase homologue subfamily M14D non-peptidase homologues MER0309028 MED121_00785
MD M15 unassigned family M15 unassigned peptidases MER0123601 MED121_18795
ME M16 unassigned subfamily M16A unassigned peptidases MER0083466 MED121_13490
ME M16 unassigned subfamily M16C unassigned peptidases MER0063082 MED121_24144
MF M17 M17.003 PepA aminopeptidase MER0083456 pepA MED121_19114
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0083457 MED121_19389
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0083468 MED121_16414
MG M24 non-peptidase homologue family M24 non-peptidase homologues MER0083461 MED121_07175
MG M24 non-peptidase homologue family M24 non-peptidase homologues MER0181179 MED121_12055
MG M24 non-peptidase homologue family M24 non-peptidase homologues MER0160728
MG M24 unassigned subfamily M24B unassigned peptidases MER0083452 MED121_19816
MG M24 unassigned subfamily M24B unassigned peptidases MER0160834 MED121_08161
MH M18 unassigned family M18 unassigned peptidases MER0083467 MED121_13815
MH M20 unassigned subfamily M20A unassigned peptidases MER0122924 MED121_07725
MH M20 unassigned subfamily M20A unassigned peptidases MER0472736
MH M20 unassigned subfamily M20C unassigned peptidases MER0100509 MED121_21260
MH M20 unassigned family M20D unassigned peptidases MER0181144 MED121_12035
MH M28 M28.004 aminopeptidase AC MER0079037 MED121_04753
MH M28 unassigned subfamily M28C unassigned peptidases MER0105952 MED121_05203
MJ M19 M19.950 Mername-AA306 protein MER0120287 MED121_14559
MJ M19 non-peptidase homologue family M19 non-peptidase homologues MER0083459 MED121_22909
MJ M38 M38.973 dihydropyrimidinase MER0861380 MED121_14040
MJ M38 M38.982 urease MER0859137 MED121_18055
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0872016 MED121_06545
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0868845 hutI
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0872322 MED121_23965
MM M50 unassigned subfamily M50B unassigned peptidases MER0895044 MED121_16369
MM M50 unassigned family M50 unassigned peptidases MER0119684 MED121_09845
MO M23 M23.009 Mername-AA292 peptidase MER0063848 MED121_23464
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0478217
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0479548 MED121_09358
MS M75 M75.001 imelysin MER0108882 MED121_03527
NB N6 N06.A01 FlhB protein (Escherichia coli) MER0405737
NB N6 non-peptidase homologue family N6 non-lyase homologues MER0911857 MED121_05945
PA S1 S01.477 AlgW peptidase MER0406825
PA S1 unassigned subfamily S1C unassigned peptidases MER0060835 MED121_07735
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0124150 MED121_00950
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0160039
PB C59 non-peptidase homologue family C59 non-peptidase homologues MER0914498 MED121_01290
PB T1 T01.007 CodW component of CodWX peptidase MER0125253 hslV MED121_19711
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER0107467 MED121_23810
PB T3 unassigned family T3 unassigned peptidases MER0107468 MED121_04573
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0435975
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0438721
PC C26 C26.957 GMP synthase MER0442513 guaA
PC C26 C26.964 CTP synthetase MER0445608
PC C26 unassigned family C26 unassigned peptidases MER0449118
PC C26 unassigned family C26 unassigned peptidases MER0447693 MED121_13320
PC C26 unassigned family C26 unassigned peptidases MER0447287
PC C26 unassigned family C26 unassigned peptidases MER0445100 hisH
PC C26 unassigned family C26 unassigned peptidases MER0444560
PC C26 unassigned family C26 unassigned peptidases MER0445281
PC C26 unassigned family C26 unassigned peptidases MER0440264
PC C56 C56.A06 DDB_G0276405 (Dictyostelium discoideum) MER0063584 MED121_13560
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0062398 MED121_19209
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0181054
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0159486
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0159543
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0159723
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0160548
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0160601
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0160655
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0160778
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0160940 MED121_00115
PE P1 unassigned family P01 unassigned peptidases MER0142408 MED121_09925
PE T5 T05.001 ornithine acetyltransferase precursor MER0139472 argJ MED121_20291
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0210215
SC S9 unassigned subfamily S9B unassigned peptidases MER1001870 MED121_08101
SC S9 unassigned family S9 unassigned peptidases MER0210935 MED121_01655
SC S33 S33.009 Mername-AA086 putative peptidase MER0213910
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0216215
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0214355
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0210851 MED121_24119
SC S33 unassigned family S33 unassigned peptidases MER0210251
SC S33 unassigned family S33 unassigned peptidases MER0213870
SC S33 unassigned family S33 unassigned peptidases MER0212932 MED121_08081
SE S11 unassigned family S11 unassigned peptidases MER0083465 MED121_13350
SE S13 S13.001 D-Ala-D-Ala peptidase C MER0105474 MED121_09483
SE S13 unassigned family S13 unassigned peptidases MER1314439
SF S24 S24.001 repressor LexA MER0125357 lexA MED121_00430
SF S24 non-peptidase homologue family S24 non-peptidase homologues MER1040631 MED121_08618
SF S24 unassigned family S24 unassigned peptidases MER1043243 MED121_02020
SF S26 S26.001 signal peptidase I MER0063086 MED121_16559
SJ S16 S16.001 Lon-A peptidase MER0061840 MED121_23354
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0475302
SJ S16 unassigned family S16 unassigned peptidases MER0083453 MED121_00065
SJ S16 unassigned family S16 unassigned peptidases MER0060834 MED121_06325
SK S14 S14.001 peptidase Clp (type 1) MER0062000 clpP MED121_23364
SK S41 S41.001 C-terminal processing peptidase-1 MER0060836 MED121_13820
SK S41 S41.004 C-terminal processing peptidase-3 MER0063085 MED121_09353
SK S49 non-peptidase homologue subfamily S49B non-peptidase homologues MER0063084 MED121_23449
SK S49 unassigned subfamily S49B unassigned peptidases MER0063583 MED121_11690
SS S66 S66.003 microcin C7 immunity protein MER0399318
SS S66 non-peptidase homologue family S66 non-peptidase homologues MER1085320 MED121_04723
SS S66 unassigned family S66 unassigned peptidases MER1085071 MED121_03185
ST S54 unassigned family S54 unassigned peptidases MER1074777 MED121_12135
ST S54 unassigned family S54 unassigned peptidases MER1084064 MED121_06895
U- U32 U32.002 collagenase (Helicobacter-type) MER0063083 MED121_03783

GENOME ANALYSIS: Comparison with 13 completely sequenced genomes from family Oceanospirillaceae
Family Comment
C26 lineage specific expansion (11 homologues)
C39 significant presence (1 homologues)
C56 lineage specific expansion (11 homologues)
C59 significant presence (1 homologues)
M4 significant presence (1 homologues)
M6 significant presence (1 homologues)
M12 significant presence (1 homologues)
M23 significant decrease in homologues (3 homologues)
M24 lineage specific expansion (7 homologues)
M28 significant presence (2 homologues)
S13 significant presence (2 homologues)
S66 significant presence (3 homologues)

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