Shigella boydii

Taxonomy
Taxonomy database identifier: 621
Superkingdom Bacteria
Phylum Proteobacteria
Class Gammaproteobacteria
Order Enterobacteriales
Family Enterobacteriaceae
Species boydii
Genus Shigella
Peptidase View peptidase sequences from Shigella boydii
Count of known and putative peptidases: 198, non-peptidase homologues 52
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AC A8 A08.001 signal peptidase II MER0056729 lspA SBO_0026
AC A8 A08.001 signal peptidase II MER1152406 lspA
AC A8 A08.001 signal peptidase II MER1152335 lspA
AD A24 A24.A01 PppA protein (Escherichia coli) MER0262418 SGB_01832
AD A24 A24.A10 gspO g.p. (Escherichia coli) MER0332831 SB96558_4224
AD A24 unassigned subfamily A24A unassigned peptidases MER0690970 SB444474_2040
AD A24 unassigned subfamily A24A unassigned peptidases MER1157554
AE A31 A31.001 HybD peptidase MER0118388 SB359474_3334
AE A31 A31.002 HyaD peptidase MER0119893 hyaD SbBS512_E2340
AE A31 A31.003 HycI peptidase MER0115100 hycI SbBS512_E3159
AF A26 A26.005 IcsP peptidase (Shigella flexneri) MER0112657 ompP SGB_00931
AF A26 unassigned family A26 unassigned peptidases MER1159450 icsP
AF A26 unassigned family A26 unassigned peptidases MER1159343
C- C118 C118.UPW family C118 homologues, unassigned MER0751157
C- C118 C118.UPW family C118 homologues, unassigned MER0752144
C- C118 C118.UPW family C118 homologues, unassigned MER0750369
CE C79 unassigned family C79 unassigned peptidases MER0393888 elaD SB444474_2707
CE C79 unassigned family C79 unassigned peptidases MER0318773 elaD SB96558_3103
CL C82 C82.A01 LdtF protein (Escherichia coli) MER0243794 yafK SGB_03903
CL C82 C82.A02 ECBD_1659 protein (Escherichia coli) MER0115069 erfK SBO_1213
CL C82 C82.A03 YnhG protein (Escherichia coli) MER0462876 ynhG SGB_01615
CL C82 C82.A04 YbiS protein (Escherichia coli) MER0114674 ybiS SGB_05087
CL C82 C82.A05 YcfS protein (Escherichia coli) MER0115090 ycfS SGB_03468
CO C40 C40.004 spr peptidase MER0115111 SbBS512_E0783
CO C40 C40.A01 NlpC protein (Escherichia coli) MER0114648 SbBS512_E1912
CO C40 non-peptidase homologue family C40 non-peptidase homologues MER0401928 SGB_03900
CO C40 non-peptidase homologue family C40 non-peptidase homologues MER0452257
CO C40 unassigned family C40 unassigned peptidases MER0114860 SbBS512_E0223
CO C40 unassigned family C40 unassigned peptidases MER0114842 SBO_1626
CO C40 unassigned family C40 unassigned peptidases MER0119568 SGB_01640
CO C40 unassigned family C40 unassigned peptidases MER0115164 SbBS512_E1091
MA M1 M01.005 alanyl aminopeptidase (bacterial-type) MER0057260 pepN SBO_2223
MA M3 M03.004 oligopeptidase A MER0057276 prlC SbBS512_E3824
MA M3 M03.004 oligopeptidase A MER1186453 prlC
MA M3 M03.005 peptidyl-dipeptidase Dcp MER0057432 dcp SbBS512_E1702
MA M41 M41.001 FtsH peptidase MER0057273 ftsH SGB_01323
MA M48 M48.002 HtpX peptidase MER0057252 htpX SBO_1244
MA M48 M48.022 low osmolarity induced peptidase MER0057270 SbBS512_E3369
MA M48 M48.023 BepA (Escherichia coli) MER0057265 SbBS512_E2868
MA M48 M48.A03 YcaL protein (Escherichia coli) MER0057430 SbBS512_E2419
MA M66 M66.001 StcE peptidase MER0118986 stcE
MA M90 M90.001 MtfA peptidase MER0219967 mtfA SB521682_1015
MA M98 M98.001 YghJ g.p. (Escherichia coli) MER0084989
MC M14 M14.034 murein peptide amidase MpaA MER0114919 ycjI SBO_1744
MC M14 M14.034 murein peptide amidase MpaA MER0469210 SB521682_1520
MD M15 non-peptidase homologue family M15 non-peptidase homologues MER0115108 SbBS512_E2392
MD M15 unassigned subfamily M15C unassigned peptidases MER0120020 SBO_1402
MD M15 unassigned subfamily M15D unassigned peptidases MER0057256 ddpX SB96558_1695
MD M74 M74.001 murein endopeptidase MER0057261 mepA SBO_2365
MD M74 M74.001 murein endopeptidase MER1261927 mepA
ME M16 M16.001 pitrilysin MER0057266 ptr SBO_2711
ME M16 M16.A05 PqqL protein (Escherichi coli) MER0056725 pqqL SGB_03057
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0057277 yhjJ SBO_3526
MF M17 M17.003 PepA aminopeptidase MER0057283 pepA SBO_4180
MF M17 M17.004 PepB aminopeptidase MER0056731 pepB SBO_2547
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0058239 map SBO_0156
MG M24 M24.003 Xaa-Pro dipeptidase (bacteria-type) MER0080580 pepQ SbBS512_E4317
MG M24 M24.004 aminopeptidase P (bacteria) MER0079949 pepP SB359474_3579
MG M24 unassigned subfamily M24B unassigned peptidases MER0980550
MG M24 unassigned subfamily M24B unassigned peptidases MER1243444
MH M20 M20.003 peptidase T MER0056728 pepT SBO_1912
MH M20 M20.007 Xaa-His dipeptidase MER0057247 pepD SbBS512_E0234
MH M20 M20.010 DapE peptidase MER0057264 dapE SBO_2488
MH M20 M20.020 p-aminobenzoyl-glutamate hydrolase subunit A MER0374118 SB521682_1538
MH M20 M20.974 acetylornithine deacetylase ArgE MER0057281 argE SBO_3976
MH M20 M20.976 allantoate amidohydrolase MER0842019 SB96558_0525/SGB_04760
MH M20 M20.A08 YgeY protein (Escherichia coli) MER0057271 ygeY SBO_3112
MH M20 non-peptidase homologue subfamily M20D non-peptidase homologues MER0057421 abgB SGB_02538
MH M20 unassigned family M20D unassigned peptidases MER0372091 SB96558_4900
MH M28 M28.005 IAP aminopeptidase MER0057267 SB521682_3231
MH M28 M28.005 IAP aminopeptidase MER1246500
MH M28 unassigned family M28 unassigned peptidases MER0322073 SB96558_3105
MH M42 M42.008 YpdE-type putative peptidase MER0057262 SBO_2410
MH M42 M42.011 aminopeptidase I alpha chain (Bacillus-type) MER0399327 ysdC SB96558_4818
MH M42 unassigned family M42 unassigned peptidases MER0057279 frvX SBO_3914
MJ M38 M38.001 isoaspartyl dipeptidase (metallo-type) MER0107985 iadA SBO_4379
MJ M38 M38.A02 PyrC protein (Escherichia coli) MER0115092 pyrC SbBS512_E2265
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0115079 ade SbBS512_E4254
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0114629 nagA2 SbBS512_E0574
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0871877 SGB_04755
MM M50 M50.004 RseP peptidase MER0057246 rseP SbBS512_E0169
MO M23 M23.011 YebA peptidase MER0057251 yebA SBO_1173
MO M23 M23.950 YibP g.p. (Escherichia sp.) MER0057278 SbBS512_E4041
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0057272 SBO_3121
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0057268 nlpD SGB_0194
MP M67 unassigned subfamily M67B unassigned peptidases MER0114838 SBO_1626
MP M67 unassigned subfamily M67B unassigned peptidases MER0115158 SbBS512_E1091
MU M103 M103.001 TldD peptidase (Escherichia coli) MER0118628 tldD SbBS512_E3276
MU M103 M103.950 microcin-processing peptidase 1 homologue MER0100627 pmbA SbBS512_E4849
NB N6 N06.A01 FlhB protein (Escherichia coli) MER0405819 flhB SBO_1120
ND N4 N04.002 EspP gamma protein autotransporter domain (Escherichi-type) MER0199280 sigA SBO_4150
ND N4 N04.002 EspP gamma protein autotransporter domain (Escherichi-type) MER0294677 SB96558_1725
ND N4 N04.002 EspP gamma protein autotransporter domain (Escherichi-type) MER0266009
ND N4 non-peptidase homologue family N4 non-lyase homologues MER0294959 SB521682_1375
ND N4 unassigned family N4 unassigned peptide lyases MER0294647 SB359474_5115
ND N4 unassigned family N4 unassigned peptide lyases MER0346385 SB96558_1724
PA S1 S01.260 B1598 peptidase MER0115148 SGB_04230
PA S1 S01.273 DegP peptidase MER0079945 degP SB521682_0169
PA S1 S01.274 DegQ peptidase MER0115075 degQ SGB_01374
PA S1 S01.275 DegS peptidase MER0056742 degS SBO_3154
PA S1 unassigned subfamily S1C unassigned peptidases MER1270138
PA S6 S06.010 EspC peptidase MER0062317 sigA SBO_4150
PA S6 S06.013 SepA peptidase (Shigellai-type) MER0276827 SGB_01248
PA S6 unassigned family S6 unassigned peptidases MER0294556 SB96558_1725
PA S6 unassigned family S6 unassigned peptidases MER1269718
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0118162 purF SBO_2349
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0114594 gltB SbBS512_E3558
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0114672 glmS SGB_02888
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0455156 glmS SB521682_4526
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0114979 asnB SGB_04476
PB C44 unassigned family C44 unassigned peptidases MER0115056 SbBS512_E0220
PB S45 S45.001 penicillin G acylase precursor MER0107795 SBO_4393
PB S45 S45.001 penicillin G acylase precursor MER0315277 SB359474_3457
PB S45 S45.001 penicillin G acylase precursor MER0238902 SBO_4399
PB T1 T01.006 HslV component of HslUV peptidase MER0057280 hslV SBO_3949
PB T2 unassigned family T2 unassigned peptidases MER0115115 ybiK SGB_05077
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER0101094 ggt SGB_0
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER0402258 SB96558_1187
PB T3 non-peptidase homologue family T3 non-peptidase homologues MER1097650 SB521682_0353/SB96558_1186
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0115171 pabA SbBS512_E3736
PC C26 C26.957 GMP synthase MER0115055 guaA SGB_02397
PC C26 C26.960 TrpD protein (anthranilate synthase component II) MER0114978 trpD SGB_01067
PC C26 C26.961 PuuD protein MER0438431 SGB_02585
PC C26 C26.964 CTP synthetase MER0114656 pyrG SGB_00341
PC C26 C26.965 imidazole glycerol phosphate synthase subunit HisH MER0115099 hisH SbBS512_E1209
PC C26 unassigned family C26 unassigned peptidases MER0057661 carA SbBS512_E0036
PC C56 C56.001 PfpI peptidase MER0115178 yfkM SB521682_3833
PC C56 C56.006 Hsp31 peptidase MER0114826 hchA SbBS512_E0916
PC C56 C56.972 phosphoribosylformylglycinamidine synthase MER0114958 purL SbBS512_E2922
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0115076 thiJ SBO_0318
PC S51 S51.001 dipeptidase E MER0056727 pepE SBO_4042
SC S9 S09.010 oligopeptidase B MER0057426 ptrB SGB_00169
SC S9 S09.A36 YfhR protein (Escherichi coli) MER0115067 SbBS512_E2909
SC S9 S09.A39 YeiG protein (Escherichi coli) MER0114741 fghA1 SbBS512_E0812
SC S9 S09.A40 YqiA protein (Escherichi coli) MER0115078 yqiA SbBS512_E3464
SC S9 S09.A43 YpfH protein (Escherichi coli) MER0115146 SbBS512_E2845
SC S9 S09.A46 YjfP protein (Escherichi coli) MER0115145 SbBS512_E4721
SC S9 S09.A47 aes protein (acetyl esterase) (Escherichi coli) MER0114920 aes SbBS512_E0407
SC S9 non-peptidase homologue subfamily S9B non-peptidase homologues MER0997159 fghA
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0115039 SbBS512_E1565
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0114739 fes SbBS512_E0486
SC S9 unassigned subfamily S9A unassigned peptidases MER0489059 SB359474_1276
SC S9 unassigned subfamily S9B unassigned peptidases MER0996670 SB96558_0345
SC S9 unassigned family S9 unassigned peptidases MER0114934 SbBS512_E4302
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER1022155 SB96558_1533
SC S33 S33.A46 YheT protein (Escherichia coli) MER0115138 SbBS512_E3728
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0115172 pldB SbBS512_E4292
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0114836 ybfF SbBS512_E0564
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER1338347
SC S33 unassigned family S33 unassigned peptidases MER0115130 menH SbBS512_E2642
SC S33 unassigned family S33 unassigned peptidases MER0114799 bioH SbBS512_E3793
SE S11 S11.002 murein-DD-endopeptidase MER0057428 pbpG SGB_0419
SE S11 S11.008 penicillin-binding protein 5-type peptidase MER0057249 dacA SGB_04443
SE S11 S11.009 penicillin-binding protein 6b-type peptidase MER0057429 SB96558_1275
SE S11 unassigned family S11 unassigned peptidases MER0948588 dacF2
SE S11 unassigned family S11 unassigned peptidases MER0057431 dacC SbBS512_E2506
SE S11 unassigned family S11 unassigned peptidases MER0351574 dacD SGB_04971
SE S11 unassigned family S11 unassigned peptidases MER0982016 blaTEM-1
SE S12 S12.006 class C beta-lactamase MER0114824 ampC SGB_02135
SE S12 S12.012 AmpH protein (Escherichia-type) MER0114591 ampH SbBS512_E0293
SE S12 unassigned family S12 unassigned peptidases MER0355463 yfeW SGB_02320
SE S13 S13.001 D-Ala-D-Ala peptidase C MER0057422 dacB SbBS512_E3588
SF S24 S24.001 repressor LexA MER0057282 lexA SBO_4074
SF S24 S24.002 phage lambda repressor protein MER0114747 SbBS512_E1249
SF S24 S24.003 UmuD protein MER0057259 umuD SbBS512_E1340
SF S24 S24.003 UmuD protein MER0401138 SB444474_2120
SF S24 S24.A20 repressor protein phage e14 (Escherichia coli) MER0057248 SBO_0255
SF S24 non-peptidase homologue family S24 non-peptidase homologues MER1034007 SB521682_2986
SF S24 unassigned family S24 unassigned peptidases MER1041742 SGB_00414
SF S24 unassigned family S24 unassigned peptidases MER1029550 SB521682_0807
SF S24 unassigned family S24 unassigned peptidases MER1328023
SF S26 S26.001 signal peptidase I MER0021877 lepB SBO_2596
SF S26 unassigned subfamily S26A unassigned peptidases MER1332548
SH S73 S73.001 gpO peptidase (Enterobacteria phage P2) MER0154729 SGB_02088
SH S73 S73.001 gpO peptidase (Enterobacteria phage P2) MER0150988 SBO_1407
SH S78 unassigned family S78 unassigned peptidases MER1072772 SGB_00107
SJ S16 S16.001 Lon-A peptidase MER0061820 lon SGB_04604
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0062318 radA SbBS512_E4936
SJ S16 S16.A10 ycbZ (Escherichia coli) MER0079948 SbBS512_E2361
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER0114890 SbBS512_E4153
SJ S16 unassigned family S16 unassigned peptidases MER1323918
SK S14 S14.001 peptidase Clp (type 1) MER0079946 clpP SBO_0331
SK S14 non-peptidase homologue family S14 non-peptidase homologues MER0359911 SGB_03342
SK S41 S41.001 C-terminal processing peptidase-1 MER0061821 prc SbBS512_E2098
SK S49 S49.003 protein C (bacteriophage lambda) MER0321146 SGB_02232
SK S49 S49.003 protein C (bacteriophage lambda) MER0057427 SbBS512_E1457
SK S49 non-peptidase homologue family S49 non-peptidase homologues MER0057257 sohB SGB_01077
SK S49 unassigned subfamily S49B unassigned peptidases MER0057254 sppA SBO_1321
SS S66 S66.002 murein tetrapeptidase LD-carboxypeptidase (Escherichia-type) MER0057258 ldcA SbBS512_E1350
ST S54 S54.016 GlpG peptidase (Escherichia-type) MER0114688 glpG SbBS512_E3806
ST S54 unassigned family S54 unassigned peptidases MER0115073 SbBS512_E0591
U- U32 U32.002 collagenase (Helicobacter-type) MER0057250 yegQ SBO_0908
U- U32 U32.003 collagenase (Salmonella-type) MER0409868 SB96558_1637
U- U32 U32.A01 YhbV protein (Escherichia coli) MER0057274 yhbV SBO_3223
U- U32 unassigned family U32 unassigned peptidases MER0057275 yhbU SBO_3224
U- U69 unassigned family U69 unassigned peptidases MER0195494
U- U69 unassigned family U69 unassigned peptidases MER0195861 SBO_1900

GENOME ANALYSIS: Comparison with 111 completely sequenced genomes from family Enterobacteriaceae
Family Comment
C118 significant presence (3 homologues)
C79 significant presence (2 homologues)
M66 significant presence (1 homologues)
M98 significant presence (1 homologues)
S15 significant presence (1 homologues)
S45 significant presence (3 homologues)