Bordetella parapertussis

Taxonomy
Taxonomy database identifier: 519
Superkingdom Bacteria
Phylum Proteobacteria
Class Betaproteobacteria
Family Alcaligenaceae
Genus Bordetella
Species parapertussis
Peptidase View peptidase sequences from Bordetella parapertussis
Count of known and putative peptidases: 97, non-peptidase homologues 37
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AC A8 unassigned family A8 unassigned peptidases MER0030695 lspA BPP1983
AD A24 A24.A10 gspO g.p. (Escherichia coli) MER0030696 BN117_4036 BPP3962
AD A24 A24.A10 gspO g.p. (Escherichia coli) MER0271951 BN117_0745
AD A24 unassigned subfamily A24A unassigned peptidases MER0033637 BN117_1525 BPP2372
AD A24 unassigned subfamily A24A unassigned peptidases MER1157558
CA C39 non-peptidase homologue family C39 non-peptidase homologues MER0716067 cyaB
CO C40 C40.006 PgpA peptidase MER0030697 BPP3001
CO C40 C40.006 PgpA peptidase MER0030698 BPP3278
CO C40 unassigned family C40 unassigned peptidases MER0763570
I- I104 I104.UPW family I104 unassigned peptidase inhibitors MER1384864
MA M3 unassigned subfamily M3A unassigned peptidases MER0030705 prlC BPP1458
MA M4 M04.023 zpx peptidase MER0030706 BPP2908
MA M41 M41.001 FtsH peptidase MER0030729 ftsH BPP2067
MA M48 M48.002 HtpX peptidase MER0030730 htpX BPP2446
MA M48 M48.A03 YcaL protein (Escherichia coli) MER0033630 BPP1393
MA M48 unassigned subfamily M48A unassigned peptidases MER0030731 BPP1669
MA M48 unassigned subfamily M48C unassigned peptidases MER0030732 BPP3555
MA M48 unassigned subfamily M48C unassigned peptidases MER0033633 BPP1924
MA M61 M61.002 BcepAP aminopeptidase (Burkholderia cepacia) MER0030735 BPP4145
MA M90 unassigned family M90 unassigned peptidases MER0228760 BPP3326
MD M15 unassigned family M15 unassigned peptidases MER0033641 BPP2837
ME M16 unassigned subfamily M16B unassigned peptidases MER0030707 BPP3483
MF M17 M17.003 PepA aminopeptidase MER0030708 pepA BPP3285
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0030727 map BPP1526
MG M24 M24.004 aminopeptidase P (bacteria) MER0030728 BPP3561
MG M24 unassigned subfamily M24B unassigned peptidases MER0172321 BPP3256
MH M20 non-peptidase homologue family M20 non-peptidase homologues MER0841802 amaB BB2648
MH M20 non-peptidase homologue family M20 non-peptidase homologues MER0843083 amaB
MH M20 unassigned subfamily M20A unassigned peptidases MER0846552 dapE
MH M20 unassigned subfamily M20C unassigned peptidases MER0033621 amaB BB2648
MH M20 unassigned family M20D unassigned peptidases MER0030718 BPP0684
MH M20 unassigned family M20D unassigned peptidases MER0030713 BPP2125
MH M20 unassigned family M20D unassigned peptidases MER0030717 BPP3730
MH M20 unassigned family M20D unassigned peptidases MER0030716 BPP3763
MH M20 unassigned family M20D unassigned peptidases MER0030715 BPP4411
MH M20 unassigned family M20D unassigned peptidases MER0407630 BN117_0649
MH M20 unassigned family M20D unassigned peptidases MER0405433 BN117_0921
MH M20 unassigned family M20 unassigned peptidases MER0030712 BPP1295
MH M20 unassigned family M20 unassigned peptidases MER0030711 BPP3324
MH M20 unassigned family M20 unassigned peptidases MER0030714 BPP4129
MH M20 unassigned family M20 unassigned peptidases MER0033638 BPP2428
MH M20 unassigned family M20 unassigned peptidases MER0033628 BPP1244
MH M20 unassigned family M20 unassigned peptidases MER0401022 BN117_4337
MJ M19 non-peptidase homologue family M19 non-peptidase homologues MER0030710 BPP0902
MJ M19 non-peptidase homologue family M19 non-peptidase homologues MER0030709 BPP3506
MJ M38 M38.982 urease MER0066325 ureC BPP3855
MJ M38 M38.A02 PyrC protein (Escherichia coli) MER0066323 pyrC BPP3762
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0066310 BPP0085
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0066313 BPP1127
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0066319 BPP2768
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0066328 pyrC BPP3929
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0870056 BN117_3037/BPP1821
MM M50 unassigned subfamily M50B unassigned peptidases MER0030733 BPP2259
MM M50 unassigned subfamily M50B unassigned peptidases MER0896636 BN117_2445/BPP1534
MN M55 unassigned family M55 unassigned peptidases MER0030734 BPP3257
MO M23 M23.009 Mername-AA292 peptidase MER0030721 BPP3878
MO M23 M23.011 YebA peptidase MER0030725 BPP3744
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0030723 BPP0296
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0030726 BPP1081
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0030722 BPP3055
MO M23 unassigned subfamily M23B unassigned peptidases MER0030724 BPP1182
MS M75 M75.001 imelysin MER0042596 BPP2269
MT M81 unassigned family M81 unassigned peptidases MER0223114 BPP0778
MT M81 unassigned family M81 unassigned peptidases MER0223115 BPP0895
MT M81 unassigned family M81 unassigned peptidases MER0223116 BPP1421
MT M81 unassigned family M81 unassigned peptidases MER0223117 BPP1955
MU M103 M103.001 TldD peptidase (Escherichia coli) MER0030767 BPP2487
MU M103 M103.UNW family M103 non-peptidase homologues MER0030766 BPP3886
NB N6 N06.001 YscU protein MER0326814
NB N6 N06.A01 FlhB protein (Escherichia coli) MER0405638 flhB BPP1479
ND N4 non-peptidase homologue family N4 non-lyase homologues MER0294967 BPP1617
ND N4 non-peptidase homologue family N4 non-lyase homologues MER0294908 phg BPP1998
ND N4 non-peptidase homologue family N4 non-lyase homologues MER0267872 brkA BN117_0906
ND N4 non-peptidase homologue family N4 non-lyase homologues MER0267932 BN117_2676
ND N4 non-peptidase homologue family N4 non-lyase homologues MER0267533 prn BN117_3502
PA S1 S01.453 MucD peptidase MER0030737 mucD BPP3298
PA S1 S01.477 AlgW peptidase MER0030736 degQ BPP4280
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0030699 purF BPP1522
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0066332 gltB BPP4253
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0030700 glmS BPP4214
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0037991 wbmI BPP0136
PB C44 unassigned family C44 unassigned peptidases MER0037992 BPP0123
PB C44 unassigned family C44 unassigned peptidases MER0457106 wbmC
PB C44 unassigned family C44 unassigned peptidases MER0457744 BPP0795
PB C44 unassigned family C44 unassigned peptidases MER0033651 wbmC BPP0142
PB C45 C45.A01 CG12120 g.p. (Drosophila melanogaster) MER0241450 BPP3011
PB C59 unassigned family C59 unassigned peptidases MER0033643 BPP3319
PB T1 T01.006 HslV component of HslUV peptidase MER0030756 hslV BPP0177
PB T2 T02.002 isoaspartyl dipeptidase (threonine type) MER0030757 BPP3263
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER0030758 ggt BPP3615
PB T3 T03.014 gamma-glutamyltransferase 2 (bacterial) MER0030763 BPP3529
PB T3 T03.025 oxamate amidohydrolase proenzyme (Klebsiella pneumonia) MER0030762 ggt BPP0885
PB T3 T03.025 oxamate amidohydrolase proenzyme (Klebsiella pneumonia) MER0030759 BPP1442
PB T3 T03.025 oxamate amidohydrolase proenzyme (Klebsiella pneumonia) MER0030761 BPP2201
PB T3 T03.025 oxamate amidohydrolase proenzyme (Klebsiella pneumonia) MER0030760 BPP3778
PB T3 unassigned family T3 unassigned peptidases MER1100005 BN117_3850
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0046006 trpG BPP4157
PC C26 C26.957 GMP synthase MER0046005 guaA BPP1259
PC C26 unassigned family C26 unassigned peptidases MER0440907 carA BPP1229
PC C56 C56.A06 DDB_G0276405 (Dictyostelium discoideum) MER0030701 BPP0519
PC C56 C56.A06 DDB_G0276405 (Dictyostelium discoideum) MER0030702 BPP1214
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0030703 BPP3103
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0066326 BPP3873
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0033629 BPP1274
PE P1 unassigned family P01 unassigned peptidases MER0030755 BPP3258
PE T5 T05.001 ornithine acetyltransferase precursor MER0136268 argJ BPP3953
SB S8 unassigned subfamily S8A unassigned peptidases MER0030738 sphB1 BPP0417
SC S9 S09.940 S-formylglutathione hydrolase FrmB (Escherichi coli) MER0066331 BPP4250
SC S9 non-peptidase homologue subfamily S9B non-peptidase homologues MER0999706 BN117_4423/BPP4290
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0066312 BPP1116
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0066317 BPP1871
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0066320 BPP2783
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0037117 BPP4011
SC S9 unassigned subfamily S9A unassigned peptidases MER0030739 BN117_2831/BPP1632 BPP1632
SC S9 unassigned subfamily S9C unassigned peptidases MER0066311 BPP0165
SC S9 unassigned subfamily S9C unassigned peptidases MER0066318 BPP2670
SC S9 unassigned subfamily S9C unassigned peptidases MER0030740 BPP3821
SC S9 unassigned subfamily S9C unassigned peptidases MER0066329 BPP3950
SC S9 unassigned family S9 unassigned peptidases MER0491680 BPP1246 BPP1246
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER1022179 BN117_2193
SC S33 S33.001 prolyl aminopeptidase MER0030750 BPP0504
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0030751 BPP0564
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0209898 BPP1032
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0033636 BPP2329
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0033625 BPP0740
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0033645 BPP3802
SC S33 unassigned family S33 unassigned peptidases MER0030752 BPP0663
SC S33 unassigned family S33 unassigned peptidases MER0066315 BPP1236
SC S33 unassigned family S33 unassigned peptidases MER0066316 BPP1333
SC S33 unassigned family S33 unassigned peptidases MER0030753 BPP3498
SC S33 unassigned family S33 unassigned peptidases MER0066322 BPP3554
SC S33 unassigned family S33 unassigned peptidases MER0209885 metX BPP4083
SC S33 unassigned family S33 unassigned peptidases MER0066330 BPP4088
SC S33 unassigned family S33 unassigned peptidases MER0033644 BPP3695
SC S33 unassigned family S33 unassigned peptidases MER0033640 BPP2767
SC S33 unassigned family S33 unassigned peptidases MER0033623 bioH BPP2294
SC S33 unassigned family S33 unassigned peptidases MER0033634 BPP2102
SC S33 unassigned family S33 unassigned peptidases MER0033631 BPP1418
SC S33 unassigned family S33 unassigned peptidases MER0033648 catD2 BPP0408
SE S11 S11.002 murein-DD-endopeptidase MER0030741 pbpG BPP1216
SE S11 non-peptidase homologue family S11 non-peptidase homologues MER0979613 BPP2606
SE S11 unassigned family S11 unassigned peptidases MER0030742 BPP0166
SE S12 unassigned family S12 unassigned peptidases MER0421384 BPP4200
SE S13 S13.003 D-Ala-D-Ala carboxypeptidase PBP3 MER0030743 BPP1148
SF S24 S24.001 repressor LexA MER0030748 lexA BPP2023
SF S26 S26.001 signal peptidase I MER0030749 lep BPP3296
SJ S16 S16.001 Lon-A peptidase MER0030745 capR/lon BPP2008
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0030746 radA BPP1840
SJ S16 unassigned family S16 unassigned peptidases MER0030747 lon BPP1033
SJ S16 unassigned family S16 unassigned peptidases MER1325377
SK S14 S14.001 peptidase Clp (type 1) MER0030744 clpP BPP2006
SK S41 S41.004 C-terminal processing peptidase-3 MER0030754 ctpA BPP0297
SS S66 S66.001 murein tetrapeptidase LD-carboxypeptidase (Pseudomonas-type) MER0030765 ldcA BPP1600
SS S66 S66.002 murein tetrapeptidase LD-carboxypeptidase (Escherichia-type) MER0030764 ldcA BPP3073
U- U56 U56.001 homomultimeric peptidase MER0172263 linM18 BPP1410
U- U69 unassigned family U69 unassigned peptidases MER0195907 BPP0735
U- U69 unassigned family U69 unassigned peptidases MER0221007 prn BPP1150
U- U69 unassigned family U69 unassigned peptidases MER0221008 BPP2975

GENOME ANALYSIS: Comparison with 19 completely sequenced genomes from family Alcaligenaceae
Family Comment
C44 lineage specific expansion (8 homologues)
I104 significant decrease in homologues (1 homologues)
M4 significant decrease in homologues (1 homologues)
U56 significant presence (1 homologues)