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Citrobacter youngae

Taxonomy
Taxonomy database identifier: 133448
Superkingdom Bacteria
Phylum Proteobacteria
Class Gammaproteobacteria
Order Enterobacteriales
Family Enterobacteriaceae
Genus Citrobacter
Species youngae
Peptidase View peptidase sequences from Citrobacter youngae
Count of known and putative peptidases: 62, non-peptidase homologues 11
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
A- A39 non-peptidase homologue family A39 non-peptidase homologues MER1375491
A- A39 non-peptidase homologue family A39 non-peptidase homologues MER1379909
AC A8 A08.001 signal peptidase II MER0348284 lspA CIT292_09377
AD A24 A24.003 type 4 prepilin peptidase 2 MER0332986 CIT292_10131
AE A31 A31.001 HybD peptidase MER0184853 CIT292_04692
AE A31 A31.002 HyaD peptidase MER0184852 CIT292_01286
AE A31 A31.003 HycI peptidase MER0427697
CA C93 unassigned family C93 unassigned peptidases MER0394165
CF C15 C15.001 pyroglutamyl-peptidase I (prokaryote) MER0232942 pcp CIT292_08120
CL C82 C82.A01 LdtF protein (Escherichia coli) MER0243796 CIT292_08657
CL C82 C82.A02 ECBD_1659 protein (Escherichia coli) MER0462294
CL C82 C82.A03 YnhG protein (Escherichia coli) MER0462865 CIT292_07372
CL C82 C82.A04 YbiS protein (Escherichia coli) MER0462295
CL C82 C82.A05 YcfS protein (Escherichia coli) MER0463724
CO C40 C40.004 spr peptidase MER0452430
CO C40 C40.A01 NlpC protein (Escherichia coli) MER0452242 CIT292_07422
CO C40 non-peptidase homologue family C40 non-peptidase homologues MER0377876 CIT292_08656
CO C40 unassigned family C40 unassigned peptidases MER0305377 CIT292_07296
G- G5 unassigned family G5 unassigned peptidases MER0911434 CIT292_07223
GC G4 non-peptidase homologue family G4 non-peptidase homologues MER0356763
MA M1 M01.005 alanyl aminopeptidase (bacterial-type) MER0335923 pepN CIT292_07870
MA M3 M03.004 oligopeptidase A MER1186915
MA M3 M03.004 oligopeptidase A MER0336039 CIT292_10290
MA M3 M03.005 peptidyl-dipeptidase Dcp MER0345801 dcp CIT292_07201
MA M32 M32.003 TcMCP1 carboxypeptidase MER0190497 CIT292_07228
MA M41 M41.001 FtsH peptidase MER0233173 ftsH CIT292_10722
MA M48 M48.002 HtpX peptidase MER0287580 htpX CIT292_06747
MA M48 M48.022 low osmolarity induced peptidase MER0886368 CIT292_09617
MA M48 M48.A03 YcaL protein (Escherichia coli) MER0885356 CIT292_07897
MA M90 M90.001 MtfA peptidase MER0219968 mtfA CIT292_06596
MD M15 unassigned subfamily M15D unassigned peptidases MER0188690 CIT292_07141
MD M74 M74.001 murein endopeptidase MER0191329 mepA CIT292_06156
ME M16 M16.001 pitrilysin MER0314903 ptrA CIT292_09745
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0471024 CIT292_10310
MF M17 M17.003 PepA aminopeptidase MER0238614 pepA CIT292_09147
MF M17 M17.004 PepB aminopeptidase MER0340436 pepB CIT292_05989
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0232574 CIT292_09536
MG M24 M24.003 Xaa-Pro dipeptidase (bacteria-type) MER0481299 pepQ CIT292_08803
MG M24 M24.004 aminopeptidase P (bacteria) MER0233776 CIT292_09646
MG M24 unassigned subfamily M24B unassigned peptidases MER0481300 CIT292_07681
MH M20 M20.003 peptidase T MER0303181 pepT CIT292_07553
MH M20 M20.007 Xaa-His dipeptidase MER0303487 pepD CIT292_08608
MH M20 M20.010 DapE peptidase MER0474936 dapE CIT292_06043
MH M20 M20.974 acetylornithine deacetylase ArgE MER0369872 argE CIT292_08946
MH M20 unassigned subfamily M20B unassigned peptidases MER0370827 pepT CIT292_08525
MH M20 unassigned family M20D unassigned peptidases MER0372853 CIT292_07091
MH M20 unassigned family M20D unassigned peptidases MER0372765 CIT292_09845
MH M28 M28.005 IAP aminopeptidase MER0190392 CIT292_09850
MH M42 M42.008 YpdE-type putative peptidase MER0229869 CIT292_06126
MH M42 M42.A01 SgcX protein (Escherichia coli) MER0364391 CIT292_08559
MJ M38 M38.001 isoaspartyl dipeptidase (metallo-type) MER0233737 CIT292_06033
MJ M38 M38.982 urease MER0872029 ureC
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0867191 hutI
MJ M38 unassigned family M38 unassigned peptidases MER0296553 iadA CIT292_10726
MM M50 M50.004 RseP peptidase MER0895825 rseP
MO M23 M23.011 YebA peptidase MER0387625 CIT292_06713
MO M23 M23.950 YibP g.p. (Escherichia sp.) MER0479273 CIT292_10408
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0389721 CIT292_09676
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0477906
MU M103 M103.001 TldD peptidase (Escherichia coli) MER0332596 CIT292_10646
MU M103 M103.UNW family M103 non-peptidase homologues MER0239264 CIT292_09099
NB N6 N06.003 EscU protein (Escherichia coli) MER0326834
NB N6 N06.A01 FlhB protein (Escherichia coli) MER0327305
NB N6 N06.A01 FlhB protein (Escherichia coli) MER0405503
PA S1 S01.260 B1598 peptidase MER0487205 CIT292_07230
PA S1 S01.273 DegP peptidase MER0327421 degP CIT292_09530
PA S1 S01.274 DegQ peptidase MER0206044 CIT292_10656
PA S1 unassigned subfamily S1C unassigned peptidases MER1270160
PA S1 unassigned subfamily S1C unassigned peptidases MER0213991 degS CIT292_10655
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0454272 purF CIT292_06173
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0455048 glmS CIT292_10577
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0457370 asnB CIT292_08158
PB C69 C69.001 dipeptidase A MER0313744 CIT292_06594
PB C69 C69.001 dipeptidase A MER0313769 CIT292_10484
PB T1 T01.006 HslV component of HslUV peptidase MER0323469
PB T2 unassigned family T2 unassigned peptidases MER1096771 iaaA
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER0307086 CIT292_10238
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0435545 pabA CIT292_10160
PC C26 C26.957 GMP synthase MER0438250 guaA CIT292_06013
PC C26 C26.960 TrpD protein (anthranilate synthase component II) MER0438249 trpD CIT292_06895
PC C26 C26.961 PuuD protein MER0438248 puuD CIT292_08534
PC C26 C26.964 CTP synthetase MER0438247 pyrG CIT292_09797
PC C26 C26.965 imidazole glycerol phosphate synthase subunit HisH MER0438251 hisH CIT292_06501
PC C26 unassigned family C26 unassigned peptidases MER0441134
PC C56 C56.001 PfpI peptidase MER0310832 CIT292_10750
PC C56 C56.A06 DDB_G0276405 (Dictyostelium discoideum) MER0385091 CIT292_08530
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0732159 CIT292_08407
PC S51 S51.001 dipeptidase E MER0313999 pepE CIT292_11206
SC S9 S09.010 oligopeptidase B MER0237440 CIT292_06725
SC S9 S09.A40 YqiA protein (Escherichi coli) MER0214911
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0212892
SC S9 unassigned subfamily S9B unassigned peptidases MER0996682 fghA
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0214872
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0213581
SC S33 unassigned family S33 unassigned peptidases MER0214254
SC S33 unassigned family S33 unassigned peptidases MER0381829 CIT292_07367
SE S11 S11.002 murein-DD-endopeptidase MER0352452 pbpG CIT292_06377
SE S11 S11.003 penicillin-binding protein 6 MER0351061 dacC CIT292_07968
SE S11 S11.008 penicillin-binding protein 5-type peptidase MER0351433 dacA CIT292_08192
SE S11 S11.009 penicillin-binding protein 6b-type peptidase MER0351501 CIT292_06516
SE S12 S12.006 class C beta-lactamase MER0420897 CIT292_09005
SE S12 S12.006 class C beta-lactamase MER0026251 ampC
SE S12 unassigned family S12 unassigned peptidases MER1005171 CIT292_08467
SE S13 S13.001 D-Ala-D-Ala peptidase C MER0298417
SF S24 S24.001 repressor LexA MER0472016 lexA CIT292_11170
SF S24 S24.003 UmuD protein MER0375534 CIT292_07037
SF S24 unassigned family S24 unassigned peptidases MER1040984 cI
SF S26 S26.001 signal peptidase I MER0238789 CIT292_05925
SJ S16 S16.001 Lon-A peptidase MER0299635
SJ S16 unassigned family S16 unassigned peptidases MER1039674 CIT292_07852
SJ S16 unassigned family S16 unassigned peptidases MER1030695 radA
SJ S16 unassigned family S16 unassigned peptidases MER1323967
SK S14 S14.001 peptidase Clp (type 1) MER0299088
SK S41 S41.001 C-terminal processing peptidase-1 MER0233440 CIT292_06746
SK S41 S41.001 C-terminal processing peptidase-1 MER0233441 CIT292_06746
SK S49 unassigned subfamily S49B unassigned peptidases MER1068247 CIT292_06902
SK S49 unassigned subfamily S49B unassigned peptidases MER0297469 sppA CIT292_07480
SS S66 S66.002 murein tetrapeptidase LD-carboxypeptidase (Escherichia-type) MER0320352 idcA CIT292_06799
ST S54 unassigned family S54 unassigned peptidases MER1074637 glpG
U- U32 unassigned family U32 unassigned peptidases MER0404020
U- U32 unassigned family U32 unassigned peptidases MER0403341
U- U69 unassigned family U69 unassigned peptidases MER0195515
U- U69 unassigned family U69 unassigned peptidases MER0196001
U- U69 unassigned family U69 unassigned peptidases MER0195726

GENOME ANALYSIS: Comparison with 13 completely sequenced genomes from genus Citrobacter
Family Comment
S33 significant decrease in homologues (4 homologues)

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Page created 8-September-2023

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