Thermobifida fusca

Taxonomy
Taxonomy database identifier: 2021
Superkingdom Bacteria
Phylum Firmicutes
Class Actinobacteria
Subclass Actinobacteridae
Order Actinomycetales
Suborder Streptosporangineae
Family Nocardiopsaceae
Genus Thermobifida
Species fusca
Peptidase View peptidase sequences from Thermobifida fusca
Count of known and putative peptidases: 66, non-peptidase homologues 15
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AC A8 unassigned family A8 unassigned peptidases MER0052863 lspA Tfu_1122
AD A24 unassigned subfamily A24A unassigned peptidases MER0024677 Tfu_1089
CA C96 non-peptidase homologue family C96 non-peptidase homologues MER0745920 FusB Tfu_1143
CL C60 unassigned subfamily C60A unassigned peptidases MER0052866 Tfu_2383
CL C82 unassigned subfamily C82A unassigned peptidases MER0742784 Tfu_1018
CO C40 C40.007 YddH peptidase MER0024675 Tfu_0190
CO C40 C40.007 YddH peptidase MER0024665 Tfu_1030
CO C40 C40.007 YddH peptidase MER0024668 Tfu_1029
CO C40 non-peptidase homologue family C40 non-peptidase homologues MER0024686 Tfu_2262
CO C40 unassigned family C40 unassigned peptidases MER0763471
CO C40 unassigned family C40 unassigned peptidases MER1020884
CO C40 unassigned family C40 unassigned peptidases MER0024685 Tfu_2283
CO C40 unassigned family C40 unassigned peptidases MER0024670 Tfu_0480
G- G5 unassigned family G5 unassigned peptidases MER0912106 Tfu_1444
MA M41 M41.015 MsFtsH g.p. (Mycobacterium smegmatis) MER0024688 ftsH Tfu_2895
MA M48 M48.004 HtpX-2 peptidase MER0027172 htpX Tfu_1008
MA M48 non-peptidase homologue subfamily M48B non-peptidase homologues MER0886738 Tfu_2917
MA M48 unassigned subfamily M48B unassigned peptidases MER0027173
MA M48 unassigned subfamily M48B unassigned peptidases MER0027171 Tfu_2673
MA M48 unassigned subfamily M48C unassigned peptidases MER0079184 pepA
MD M15 unassigned subfamily M15B unassigned peptidases MER0469754 Tfu_0368
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0021334 Tfu_2363
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0052865 Tfu_2362
ME M16 unassigned subfamily M16B unassigned peptidases MER0843363
ME M16 unassigned subfamily M16B unassigned peptidases MER0024689 Tfu_0785
MF M17 unassigned family M17 unassigned peptidases MER0024667 pepA2 Tfu_0995
MF M17 unassigned family M17 unassigned peptidases MER0024673 pepA1 Tfu_0503
MG M24 M24.033 aminopeptidase P (Streptomyces-type) MER0027170 Tfu_1744
MG M24 M24.A06 At4g37040 (Arabidopsis thaliana)-type peptidase MER0024683 Tfu_0968
MG M24 unassigned subfamily M24A unassigned peptidases MER0024680 Tfu_2624
MH M20 non-peptidase homologue family M20 non-peptidase homologues MER0021831 Tfu_2437
MH M20 unassigned family M20D unassigned peptidases MER0024684 Tfu_2564
MH M20 unassigned subfamily M20F unassigned peptidases MER0052547 Tfu_0526
MH M20 unassigned family M20 unassigned peptidases MER0024672 Tfu_0495
MH M20 unassigned family M20 unassigned peptidases MER0052548 Tfu_2787
MH M28 unassigned subfamily M28A unassigned peptidases MER0024669 Tfu_2403
MH M28 unassigned subfamily M28F unassigned peptidases MER1086396
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0866148 Tfu_2473
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0865852 Tfu_0821
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0024676 Tfu_1055
MM M50 non-peptidase homologue family M50 non-peptidase homologues MER0052860 Tfu_0488
MM M50 unassigned subfamily M50B unassigned peptidases MER0897146 Tfu_0748
MM M50 unassigned subfamily M50B unassigned peptidases MER0162917 Tfu_1815
MP M67 M67.009 Mec peptidase MER0163079 Tfu_2370
PA S1 S01.513 MarP peptidase (Mycobacterium tuberculosis) MER0052859 Tfu_0120
PA S1 unassigned subfamily S1A unassigned peptidases MER0217437 Tfu_0400
PA S1 unassigned subfamily S1B unassigned peptidases MER0191475 Tfu_0899
PA S1 unassigned subfamily S1C unassigned peptidases MER0024674 Tfu_0507
PA S1 unassigned subfamily S1C unassigned peptidases MER0024690 Tfu_0353
PA S1 unassigned subfamily S1E unassigned peptidases MER0024671 Tfu_0484
PA S1 unassigned family S1 unassigned peptidases MER0133962 Tfu_0745
PA S1 unassigned family S1 unassigned peptidases MER0028244 Tfu_0899
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0024682 Tfu_2747
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0458619 Tfu_1173
PB C44 unassigned family C44 unassigned peptidases MER0024679 glmS Tfu_2611
PB S45 S45.003 cephalosporin C acylase precursor MER0026144 Tfu_1644
PB T1 T01.005 bacterial proteasome, beta component MER0026150 prcB Tfu_1790
PB T1 T01.980 bacterial proteasome, alpha subunit MER0052864 prcA Tfu_1789
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0439544 Tfu_1666
PC C26 C26.964 CTP synthetase MER0450456 pyrG Tfu_1199
PC C26 C26.A32 imidazoleglycerol-phosphate synthase (Pyrococcus furiosus) MER0451009 pdxT Tfu_2097
PC C26 unassigned family C26 unassigned peptidases MER0451373 Tfu_0156
PC C26 unassigned family C26 unassigned peptidases MER0443612 carA Tfu_1056
PC C26 unassigned family C26 unassigned peptidases MER0441888 Tfu_1386
PC C56 C56.001 PfpI peptidase MER0024666 Tfu_1178
PC C56 C56.001 PfpI peptidase MER0024681 Tfu_2828
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0052868 Tfu_2826
PD N10 unassigned family N10 unassigned peptide lyases MER0195062 Tfu_0803
PD N10 unassigned family N10 unassigned peptide lyases MER0223700 Tfu_0803
PD N11 N11.001 intein-containing chloroplast ATP-dependent peptide lyase MER0195396 Tfu_2914
PE T5 unassigned family T5 unassigned peptidases MER0122442 argJ Tfu_2056
SB S8 non-peptidase homologue subfamily S8A non-peptidase homologues MER0021858 Tfu_0221
SC S9 S09.072 puromycin hydrolase MER0018163 Tfu_0806
SC S9 S09.073 Xaa-Pro dipeptidylpeptidase MER0023888 Tfu_0485
SC S9 S09.076 prolyl oligopeptidase (Myxococcus xanthus) MER0023886 Tfu_2212
SC S9 non-peptidase homologue subfamily S9B non-peptidase homologues MER1001873 Tfu_0267
SC S9 unassigned subfamily S9A unassigned peptidases MER1294816
SC S9 unassigned subfamily S9A unassigned peptidases MER0023861 Tfu_1856
SC S9 unassigned family S9 unassigned peptidases MER0039276 dlhA
SC S15 unassigned family S15 unassigned peptidases MER1025424 Tfu_0746
SC S33 S33.001 prolyl aminopeptidase MER0026145 Tfu_2349
SC S33 unassigned family S33 unassigned peptidases MER0052862 Tfu_0750
SC S33 unassigned family S33 unassigned peptidases MER0052867 Tfu_2780
SC S33 unassigned family S33 unassigned peptidases MER1339551
SC S33 unassigned family S33 unassigned peptidases MER0214435 Tfu_1558
SC S33 unassigned family S33 unassigned peptidases MER0214264 metX Tfu_2822
SE S12 non-peptidase homologue family S12 non-peptidase homologues MER0026149 Tfu_0220
SE S13 S13.004 penillin-binding protein 4 MER0026148 Tfu_2903
SF S24 S24.001 repressor LexA MER0026143 lexA Tfu_2152
SF S26 S26.011 signal peptidase SipW (Bacillus-type) MER0052869 Tfu_2961
SF S26 S26.025 signal peptidase sipX MER0052861 Tfu_0667
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0474922 Tfu_2711
SJ S16 S16.A12 PF1438 (Pyrococcus furiosus) MER0471934 Tfu_0539
SK S14 S14.008 ClpP1 peptidase (Streptomyces-type) MER0026146 clpP2 Tfu_2194
SK S14 S14.009 ClpP2 peptidase (Streptomyces-type) MER0026147 clpP1 Tfu_2193
SK S49 unassigned subfamily S49A unassigned peptidases MER1351563
SK S49 unassigned subfamily S49B unassigned peptidases MER0061759 Tfu_0579
ST S54 S54.027 RhoII peptidase (Haloferax volcanii) and similar MER0026142 Tfu_1026
ST S54 unassigned family S54 unassigned peptidases MER1078425 Tfu_3068
ST S54 unassigned family S54 unassigned peptidases MER1076424 Tfu_2931
U- U72 U72.001 Dop isopeptidase MER0398124
U- U72 unassigned family U72 unassigned peptidases MER0402630

GENOME ANALYSIS: Comparison with 10 completely sequenced genomes from suborder Streptosporangineae
Family Comment
C26 significant decrease in homologues (6 homologues)
C44 significant decrease in homologues (3 homologues)
C82 significant decrease in homologues (1 homologues)
C96 significant presence (1 homologues)
G5 significant decrease in homologues (1 homologues)
M24 significant decrease in homologues (3 homologues)
M38 significant decrease in homologues (3 homologues)
N10 significant presence (2 homologues)
N11 significant presence (1 homologues)
S1 significant decrease in homologues (8 homologues)
S8 significant decrease in homologues (1 homologues)
S9 significant decrease in homologues (7 homologues)
S12 significant decrease in homologues (1 homologues)
S16 significant decrease in homologues (2 homologues)
S33 significant decrease in homologues (6 homologues)