Photorhabdus luminescens

Taxonomy
Taxonomy database identifier: 29488
Superkingdom Bacteria
Phylum Proteobacteria
Class Gammaproteobacteria
Order Enterobacteriales
Family Enterobacteriaceae
Genus Photorhabdus
Species luminescens
Peptidase View peptidase sequences from Photorhabdus luminescens
Count of known and putative peptidases: 100, non-peptidase homologues 33
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
A- A39 non-peptidase homologue family A39 non-peptidase homologues MER1376165
A- A39 non-peptidase homologue family A39 non-peptidase homologues MER1375544
A- A39 non-peptidase homologue family A39 non-peptidase homologues MER1376145
A- A39 non-peptidase homologue family A39 non-peptidase homologues MER1376418
AC A8 A08.001 signal peptidase II MER0033452
AD A24 unassigned subfamily A24A unassigned peptidases MER0691316
AD A24 unassigned subfamily A24A unassigned peptidases MER0690795
AD A24 unassigned subfamily A24A unassigned peptidases MER0033477 plu1186
AD A24 unassigned subfamily A24A unassigned peptidases MER0033483 plu1733
AD A24 unassigned subfamily A24A unassigned peptidases MER1158236
AD A24 unassigned subfamily A24A unassigned peptidases MER1157882
AD A24 unassigned family A24 unassigned peptidases MER0033465 pilU plu1057
CA C2 unassigned subfamily C2A unassigned peptidases MER0705887
CA C2 unassigned subfamily C2A unassigned peptidases MER0003973 plu2455
CA C39 C39.005 colicin V processing peptidase MER0033476 plu0852
CA C39 non-peptidase homologue family C39 non-peptidase homologues MER0716969
CA C39 non-peptidase homologue family C39 non-peptidase homologues MER0716139
CA C39 non-peptidase homologue family C39 non-peptidase homologues MER0717357
CA C39 non-peptidase homologue family C39 non-peptidase homologues MER0713923
CA C39 non-peptidase homologue family C39 non-peptidase homologues MER0038094 plu3127
CA C39 non-peptidase homologue family C39 non-peptidase homologues MER0713350
CA C39 non-peptidase homologue family C39 non-peptidase homologues MER0033474 plu0634
CA C39 unassigned family C39 unassigned peptidases MER0715363
CA C58 C58.001 YopT peptidase MER0027336
CA C58 C58.001 YopT peptidase MER0033500 plu3788
CA C58 C58.001 YopT peptidase MER0033489 plu2401
CD C80 unassigned family C80 unassigned peptidases MER0321680
CD C80 unassigned family C80 unassigned peptidases MER0031362 plu1341
CD C80 unassigned family C80 unassigned peptidases MER0031351 plu1344
CD C80 unassigned family C80 unassigned peptidases MER0031355 plu3324
CF C15 C15.001 pyroglutamyl-peptidase I (prokaryote) MER0033457 pcp1 plu4303
CF C15 C15.001 pyroglutamyl-peptidase I (prokaryote) MER0033504 pcp2 plu4418
CF C15 unassigned family C15 unassigned peptidases MER0697643
CL C82 C82.A01 LdtF protein (Escherichia coli) MER0243842
CL C82 C82.A05 YcfS protein (Escherichia coli) MER0461280
CL C82 unassigned subfamily C82A unassigned peptidases MER0740339
CL C82 unassigned subfamily C82A unassigned peptidases MER0742843
CL C82 unassigned subfamily C82A unassigned peptidases MER0741101
CO C40 C40.004 spr peptidase MER0033514 spr plu2864
CO C40 C40.A01 NlpC protein (Escherichia coli) MER0033454 nlpC plu2653
MA M3 M03.004 oligopeptidase A MER0033456 opdA plu0124
MA M4 M04.024 PrtS peptidase (Photorhabdus luminescens) MER0822504
MA M4 M04.024 PrtS peptidase (Photorhabdus luminescens) MER0033481 plu1382
MA M10 M10.063 PrtA peptidase (Photorhabdus-type) MER0825965
MA M10 M10.063 PrtA peptidase (Photorhabdus-type) MER0029132 prtA
MA M10 M10.063 PrtA peptidase (Photorhabdus-type) MER1209545
MA M10 M10.063 PrtA peptidase (Photorhabdus-type) MER0029131
MA M10 M10.063 PrtA peptidase (Photorhabdus-type) MER1208719
MA M32 unassigned family M32 unassigned peptidases MER1261912
MA M41 M41.001 FtsH peptidase MER0033444 ftsH plu4535
MA M48 M48.002 HtpX peptidase MER0033449 htpX plu2681
MA M48 M48.023 BepA (Escherichia coli) MER0033492 plu2750
MA M48 unassigned subfamily M48A unassigned peptidases MER0887476
MD M15 non-peptidase homologue family M15 non-peptidase homologues MER0068401 plu1748
MD M15 unassigned subfamily M15B unassigned peptidases MER0038698 plu2723
MD M15 unassigned family M15 unassigned peptidases MER0837680
ME M16 M16.001 pitrilysin MER0033508 ptrA plu0631
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0033473 plu0306
ME M16 unassigned subfamily M16A unassigned peptidases MER0623242
MF M17 M17.003 PepA aminopeptidase MER0033458 pepA plu4481
MF M17 M17.004 PepB aminopeptidase MER0033459 pepB plu3276
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0033453 map plu0671
MG M24 M24.003 Xaa-Pro dipeptidase (bacteria-type) MER0033463 pepQ plu4401
MG M24 M24.004 aminopeptidase P (bacteria) MER0033462 pepP plu3601
MH M20 M20.003 peptidase T MER0033464 pepT plu2810
MH M20 M20.007 Xaa-His dipeptidase MER0372959
MH M20 M20.007 Xaa-His dipeptidase MER0033460 pepD plu1240
MH M20 M20.010 DapE peptidase MER0033441 dapE plu2722
MH M20 M20.020 p-aminobenzoyl-glutamate hydrolase subunit A MER0033432 abgA plu3726
MH M20 M20.974 acetylornithine deacetylase ArgE MER0038714 argE plu4745
MH M20 non-peptidase homologue subfamily M20D non-peptidase homologues MER0851389
MH M20 non-peptidase homologue family M20 non-peptidase homologues MER0033433 abgB plu3725
MH M28 unassigned family M28 unassigned peptidases MER0033503 plu4391
MJ M38 M38.982 urease MER0045980 ureC plu2173
MJ M38 M38.A02 PyrC protein (Escherichia coli) MER0068402
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0045984 hutI plu3197
MM M50 M50.004 RseP peptidase MER0056146 rseP
MO M23 M23.011 YebA peptidase MER0033515 yebA plu2116
MO M23 M23.950 YibP g.p. (Escherichia sp.) MER0033506 plu4841
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0033455 nlpD plu0718
NB N6 N06.001 YscU protein MER0181669
NB N6 N06.A01 FlhB protein (Escherichia coli) MER0405509
PA S1 S01.275 DegS peptidase MER0033443 degS plu4022
PA S1 unassigned subfamily S1A unassigned peptidases MER0956735
PA S1 unassigned subfamily S1A unassigned peptidases MER0217653
PA S1 unassigned subfamily S1C unassigned peptidases MER0033442 degQ plu4018
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0033510 purF plu3167
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0037987 plu2770
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0068408 gltB plu4009
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0033446 glmS plu0037
PB C44 unassigned family C44 unassigned peptidases MER0033478 plu1194
PB C45 unassigned family C45 unassigned peptidases MER0725644
PB S45 S45.004 acyl-homoserine lactone acylase MER0033497 plu3527
PB T1 T01.006 HslV component of HslUV peptidase MER0033448 hslV plu4762
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER0033445 ggt plu3908
PC C26 C26.954 carA protein MER0045979 carA plu0603
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0435674
PC C26 C26.960 TrpD protein (anthranilate synthase component II) MER0045982 trpG plu2463
PC C26 C26.965 imidazole glycerol phosphate synthase subunit HisH MER0068400
PC C26 C26.A25 trp1 (Schizosaccharomyces pombe) MER0045985 plu3563
PC C26 unassigned family C26 unassigned peptidases MER0045983 guaA plu2712
PC C56 C56.972 phosphoribosylformylglycinamidine synthase MER0068407
PC C56 C56.975 ES1 protein homolog, mitochondrial MER0177541 elbB plu4007
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0732529
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0033502 plu4297
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0033499 plu3545
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0033498 plu3544
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0033480 plu1330
PE P1 P01.003 BapF peptidase (Pseudomonas sp.) MER0033487 plu2258
PE P1 P01.101 pantetheinyl hydrolase ThnT precursor MER0033486 plu2239
SB S8 non-peptidase homologue subfamily S8A non-peptidase homologues MER0975064
SB S8 non-peptidase homologue subfamily S8B non-peptidase homologues MER1290266
SB S8 non-peptidase homologue subfamily S8B non-peptidase homologues MER1290281
SB S8 non-peptidase homologue subfamily S8B non-peptidase homologues MER1290286
SB S8 unassigned subfamily S8A unassigned peptidases MER0972020
SB S8 unassigned subfamily S8A unassigned peptidases MER0033475 plu0643
SB S8 unassigned subfamily S8A unassigned peptidases MER0068412 plu4458
SB S8 unassigned subfamily S8A unassigned peptidases MER0033493 plu2820
SC S9 S09.010 oligopeptidase B MER0033509 ptrB plu2716
SC S9 S09.940 S-formylglutathione hydrolase FrmB (Escherichi coli) MER0068410 plu4333
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0177399 plu1341
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0214184
SC S9 unassigned subfamily S9B unassigned peptidases MER1001980
SC S9 unassigned subfamily S9B unassigned peptidases MER0996571
SC S9 unassigned family S9 unassigned peptidases MER0068404 plu2738
SC S9 unassigned family S9 unassigned peptidases MER0068409 plu4186
SC S9 unassigned family S9 unassigned peptidases MER0033488 plu2266
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER1023002
SC S33 S33.001 prolyl aminopeptidase MER0033466 pip plu2691
SC S33 S33.008 prolyl aminopeptidase 2 MER0068411 plu4390
SC S33 S33.010 SCO7095-type peptidase MER0068413 pldB plu4619
SC S33 S33.A02 At5g38520 (Arabidopsis thaliana) MER0033479 plu1261
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0033495 plu3206
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0039344 plu1531
SC S33 unassigned family S33 unassigned peptidases MER0212733
SC S33 unassigned family S33 unassigned peptidases MER0068403 plu2323
SC S33 unassigned family S33 unassigned peptidases MER0033494 menH plu3072
SC S33 unassigned family S33 unassigned peptidases MER0033490 plu2437
SC S33 unassigned family S33 unassigned peptidases MER0033485 plu2202
SC S33 unassigned family S33 unassigned peptidases MER0033482 plu1532
SC S33 unassigned family S33 unassigned peptidases MER0033436 bioH plu0204
SC S33 unassigned family S33 unassigned peptidases MER0033467 plu0113
SC S82 unassigned family S82 unassigned homologues MER0218806
SE S11 S11.008 penicillin-binding protein 5-type peptidase MER0033438 dacA plu1294
SE S11 non-peptidase homologue family S11 non-peptidase homologues MER0971190
SE S11 unassigned family S11 unassigned peptidases MER0033440 dacC plu1573
SE S12 S12.006 class C beta-lactamase MER0033434 ampC plu0831
SE S12 S12.012 AmpH protein (Escherichia-type) MER0033435 ampH plu4478
SE S12 S12.012 AmpH protein (Escherichia-type) MER0017061 ampH
SE S12 unassigned family S12 unassigned peptidases MER1024536
SE S12 unassigned family S12 unassigned peptidases MER1006098
SE S12 unassigned family S12 unassigned peptidases MER1008747
SE S12 unassigned family S12 unassigned peptidases MER1028512
SE S12 unassigned family S12 unassigned peptidases MER1004065
SE S12 unassigned family S12 unassigned peptidases MER1009524
SE S12 unassigned family S12 unassigned peptidases MER1007156
SE S12 unassigned family S12 unassigned peptidases MER1008666
SE S12 unassigned family S12 unassigned peptidases MER1008499
SE S12 unassigned family S12 unassigned peptidases MER1007390
SE S12 unassigned family S12 unassigned peptidases MER1009223
SE S12 unassigned family S12 unassigned peptidases MER1011562
SE S12 unassigned family S12 unassigned peptidases MER0033468 plu0162
SE S12 unassigned family S12 unassigned peptidases MER0033470 plu0165
SE S12 unassigned family S12 unassigned peptidases MER0033471 plu0166
SE S12 unassigned family S12 unassigned peptidases MER0033472 plu0167
SE S12 unassigned family S12 unassigned peptidases MER0033469 plu0164
SE S13 S13.001 D-Ala-D-Ala peptidase C MER0033439 dacB plu4539
SE S13 unassigned family S13 unassigned peptidases MER1308482
SF S24 S24.001 repressor LexA MER0039291 lexA plu4374
SF S24 unassigned family S24 unassigned peptidases MER1328157
SF S24 unassigned family S24 unassigned peptidases MER0068406 plu2922
SF S26 S26.001 signal peptidase I MER0033450 lepB plu3341
SF S26 non-peptidase homologue subfamily S26A non-peptidase homologues MER1044883
SF S26 non-peptidase homologue subfamily S26A non-peptidase homologues MER1048503
SF S26 unassigned subfamily S26A unassigned peptidases MER1049125
SJ S16 S16.001 Lon-A peptidase MER0033451 lon plu3867
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0033511 radA plu0552
SJ S16 S16.A10 ycbZ (Escherichia coli) MER0033484 plu1773
SK S14 S14.001 peptidase Clp (type 1) MER0033437 clpP plu3869
SK S41 S41.001 C-terminal processing peptidase-1 MER0033507 prc plu2682
SK S49 non-peptidase homologue subfamily S49A unassigned non-peptidase homologues MER0033512 sohB plu2439
SK S49 unassigned subfamily S49A unassigned peptidases MER1343941
SK S49 unassigned subfamily S49B unassigned peptidases MER1068214
SK S49 unassigned subfamily S49B unassigned peptidases MER0033513 sppA plu2553
SK S49 unassigned subfamily S49B unassigned peptidases MER1353948
SK S49 unassigned subfamily S49B unassigned peptidases MER1353854
ST S54 S54.016 GlpG peptidase (Escherichia-type) MER0033447 glpG plu0196
ST S54 S54.029 rhomboid peptidase 2 (Mycobacterium sp.) MER0033501 plu4233
ST S54 unassigned family S54 unassigned peptidases MER1083758
ST S54 unassigned family S54 unassigned peptidases MER0033496 plu3362
U- U32 U32.002 collagenase (Helicobacter-type) MER0036942 plu2780

GENOME ANALYSIS: Comparison with 122 completely sequenced genomes from family Enterobacteriaceae
Family Comment
C2 significant presence (2 homologues)
C45 significant presence (1 homologues)
C58 significant presence (3 homologues)
S82 significant presence (1 homologues)