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Novosphingobium aromaticivorans

Taxonomy
Taxonomy database identifier: 48935
Superkingdom Bacteria
Phylum Proteobacteria
Class Alphaproteobacteria
Order Rhodospirillales
Family Sphingomonadaceae
Genus Novosphingobium
Species aromaticivorans
Peptidase View peptidase sequences from Novosphingobium aromaticivorans
Count of known and putative peptidases: 82, non-peptidase homologues 11
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AA A28 unassigned subfamily A28B unassigned peptidases MER0427651 Saro_2630
AC A8 unassigned family A8 unassigned peptidases MER0021769 lspA Saro_3258
AD A24 unassigned subfamily A24A unassigned peptidases MER0020531 Saro_2305
AD A24 unassigned subfamily A24B unassigned peptidases MER0063446 Saro_1081
AD A24 unassigned subfamily A24B unassigned peptidases MER0063447 Saro_1526
CL C82 C82.A01 LdtF protein (Escherichia coli) MER0244148 Saro_2684
CL C82 unassigned subfamily C82A unassigned peptidases MER0123170 Saro_3070
CL C82 unassigned subfamily C82B unassigned peptidases MER0076724 Saro_1961 Saro_1961
G- G5 unassigned family G5 unassigned peptidases MER0911564 Saro_2395
GC G4 non-peptidase homologue family G4 non-peptidase homologues MER0314225 Saro_2113
GC G4 non-peptidase homologue family G4 non-peptidase homologues MER0322467 Saro_2114
MA M41 M41.001 FtsH peptidase MER0024321 ftsH Saro_0076
MA M48 unassigned subfamily M48C unassigned peptidases MER0062929 Saro_1904
MA M48 unassigned subfamily M48C unassigned peptidases MER0063444 Saro_0230
MA M48 unassigned family M48 unassigned peptidases MER0024329 Saro_0005
MA M61 M61.001 glycyl aminopeptidase MER0024333 Saro_0290
MA M78 unassigned family M78 unassigned peptidases MER0910396 Saro_2203
MC M14 non-peptidase homologue subfamily M14D non-peptidase homologues MER0080060 Saro_3278
ME M16 unassigned subfamily M16B unassigned peptidases MER0024306 Saro_1038
ME M16 unassigned subfamily M16B unassigned peptidases MER0024312 Saro_2826
ME M16 unassigned family M16 unassigned peptidases MER0024335 Saro_0990
MF M17 unassigned family M17 unassigned peptidases MER0024308 Saro_1112
MF M17 unassigned family M17 unassigned peptidases MER0024310 pepA Saro_0890
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0024309 Saro_1110
MG M24 M24.009 aminopeptidase P1 MER0080056 Saro_0438
MG M24 unassigned subfamily M24B unassigned peptidases MER0027440 Saro_0152
MH M20 M20.009 Mername-AA028 peptidase MER0024301
MH M20 non-peptidase homologue subfamily M20D non-peptidase homologues MER0024300
MH M20 unassigned subfamily M20A unassigned peptidases MER0024332 Saro_0238
MH M20 unassigned subfamily M20A unassigned peptidases MER0052551
MH M20 unassigned family M20D unassigned peptidases MER0063450 Saro_2348
MH M20 unassigned family M20D unassigned peptidases MER0024326 Saro_2932
MH M20 unassigned family M20 unassigned peptidases MER0063448 Saro_1670
MH M20 unassigned family M20 unassigned peptidases MER0024311 Saro_0884
MH M20 unassigned family M20 unassigned peptidases MER0052550 Saro_3309
MH M28 unassigned subfamily M28A unassigned peptidases MER0024325 Saro_0844
MH M28 unassigned subfamily M28D unassigned peptidases MER0024299 Saro_2350
MH M28 unassigned subfamily M28E unassigned peptidases MER0063449 Saro_1949
MH M28 unassigned subfamily M28F unassigned peptidases MER0024313 Saro_2825
MH M28 unassigned family M28 unassigned peptidases MER0024334 Saro_1751
MJ M19 unassigned family M19 unassigned peptidases MER0024323 Saro_0805
MJ M19 unassigned family M19 unassigned peptidases MER0024317 Saro_3261
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0867381 Saro_3412
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0860474 Saro_3646
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0865278 Saro_3088
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0863165 Saro_1054
MM M50 unassigned subfamily M50A unassigned peptidases MER0062928 Saro_1376
MM M50 unassigned subfamily M50B unassigned peptidases MER0063451 Saro_2485
MO M23 M23.009 Mername-AA292 peptidase MER0024314 Saro_3157
MO M23 M23.009 Mername-AA292 peptidase MER0024322 Saro_0074
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0024324 Saro_0849
MO M23 non-peptidase homologue family M23 non-peptidase homologues MER0063443 Saro_0056
MO M23 unassigned subfamily M23B unassigned peptidases MER0024320 Saro_0061
MO M23 unassigned subfamily M23B unassigned peptidases MER0024327 Saro_0169
MP M67 unassigned subfamily M67B unassigned peptidases MER0080059 Saro_3049
MU M103 M103.001 TldD peptidase (Escherichia coli) MER0080055 Saro_0413
MU M103 M103.UNW family M103 non-peptidase homologues MER0025903 Saro_0294
PA S1 unassigned subfamily S1C unassigned peptidases MER0024316 Saro_2398
PA S1 unassigned subfamily S1C unassigned peptidases MER0024331 Saro_3331
PA S46 unassigned family S46 unassigned peptidases MER0025898 Saro_2591
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0024304 Saro_1763
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0458649 Saro_3176
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0024305 Saro_1202
PB C44 unassigned family C44 unassigned peptidases MER0458648 Saro_2327
PB T1 T01.006 HslV component of HslUV peptidase MER0080057 hslV Saro_2635
PB T1 unassigned family T1 unassigned peptidases MER0080058 Saro_2772
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER0025900 Saro_0192
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0435931 Saro_2022
PC C26 C26.957 GMP synthase MER0443381 guaA Saro_0550
PC C26 C26.964 CTP synthetase MER0450705 pyrG Saro_2017
PC C26 unassigned family C26 unassigned peptidases MER0446599 hisH Saro_1007
PC C26 unassigned family C26 unassigned peptidases MER0443259 carA Saro_2231
PC C26 unassigned family C26 unassigned peptidases MER0450095 Saro_2606
PC C26 unassigned family C26 unassigned peptidases MER0448387
PE T5 T05.001 ornithine acetyltransferase precursor MER0123084 argJ Saro_1993
SB S8 non-peptidase homologue subfamily S8A non-peptidase homologues MER0973510 Saro_3034
SB S8 unassigned subfamily S8A unassigned peptidases MER0024315 Saro_1593
SB S8 unassigned subfamily S8A unassigned peptidases MER0024303 Saro_1837
SC S9 S09.009 dipeptidyl-peptidase 4 (bacteria-type 1) MER0020400 Saro_1409
SC S9 S09.010 oligopeptidase B MER0020622 Saro_0437
SC S9 S09.012 dipeptidyl-peptidase 5 MER0022438 Saro_0184
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0216167 Saro_2342
SC S9 unassigned subfamily S9A unassigned peptidases MER0022437 Saro_2524
SC S9 unassigned subfamily S9A unassigned peptidases MER0020398 Saro_2525
SC S9 unassigned subfamily S9B unassigned peptidases MER1001664 Saro_2922
SC S9 unassigned family S9 unassigned peptidases MER0478814 Saro_2799
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER1020004 Saro_2799
SC S33 S33.010 SCO7095-type peptidase MER0025895 Saro_0691
SC S33 unassigned family S33 unassigned peptidases MER0017156 xylF Saro_3858
SC S33 unassigned family S33 unassigned peptidases MER0039340 bphD
SC S33 unassigned family S33 unassigned peptidases MER0039385 orf154
SC S33 unassigned family S33 unassigned peptidases MER0211103 Saro_1411
SC S33 unassigned family S33 unassigned peptidases MER0214439 Saro_2859
SC S33 unassigned family S33 unassigned peptidases MER0210641 Saro_2864
SE S11 unassigned family S11 unassigned peptidases MER0985230 Saro_0280
SE S11 unassigned family S11 unassigned peptidases MER0025243 Saro_1942
SE S12 S12.950 esterase EstB MER0025899 Saro_0870
SE S12 S12.950 esterase EstB MER0421724 Saro_0961
SE S12 S12.A23 GYO_0385 g.p. (Bacillus subtilis) MER0025901 Saro_0215
SE S12 S12.A23 GYO_0385 g.p. (Bacillus subtilis) MER0421726 Saro_2025
SE S12 unassigned family S12 unassigned peptidases MER0421723 Saro_0045
SE S12 unassigned family S12 unassigned peptidases MER0421725 Saro_1793
SF S24 S24.001 repressor LexA MER0025897 lexA Saro_2029
SF S24 unassigned family S24 unassigned peptidases MER1041439 Saro_2371
SF S26 S26.001 signal peptidase I MER0025890 Saro_1808
SF S26 S26.001 signal peptidase I MER0025893 Saro_0909
SF S26 S26.014 TraF peptidase MER0122280 Saro_0362
SF S26 S26.014 TraF peptidase MER0062059 Saro_2165
SF S26 non-peptidase homologue subfamily S26A non-peptidase homologues MER1049822 Saro_4003
SF S26 non-peptidase homologue subfamily S26A non-peptidase homologues MER1047685 orf851
SH S78 S78.001 prohead peptidase (bacteriophage HK97) MER0025488 Saro_3121
SH S78 S78.001 prohead peptidase (bacteriophage HK97) MER0001788 Saro_0648
SJ S16 S16.001 Lon-A peptidase MER0025894 Saro_1361
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0474541 Saro_1956
SK S14 S14.001 peptidase Clp (type 1) MER0025892 clpP Saro_3055
SK S41 S41.004 C-terminal processing peptidase-3 MER0025902 Saro_0055
SK S49 unassigned subfamily S49B unassigned peptidases MER0025891 Saro_3060
SK S49 unassigned subfamily S49C unassigned peptidases MER1071765 Saro_0401
SS S66 unassigned family S66 unassigned peptidases MER0025896 Saro_1426

GENOME ANALYSIS: Comparison with 11 completely sequenced genomes from genus Novosphingobium
Family Comment
G5 significant presence (1 homologues)
M20 lineage specific expansion (9 homologues)
M28 lineage specific expansion (5 homologues)
M38 significant decrease in homologues (4 homologues)
S15 significant decrease in homologues (1 homologues)
S26 lineage specific expansion (6 homologues)
S46 significant presence (1 homologues)
S78 significant presence (2 homologues)
T3 significant decrease in homologues (1 homologues)

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