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Rhodospirillum rubrum

Taxonomy
Taxonomy database identifier: 1085
Superkingdom Bacteria
Phylum Proteobacteria
Class Alphaproteobacteria
Order Rhodospirillales
Family Rhodospirillaceae
Species rubrum
Genus Rhodospirillum
Peptidase View peptidase sequences from Rhodospirillum rubrum
Count of known and putative peptidases: 78, non-peptidase homologues 17
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AC A8 unassigned family A8 unassigned peptidases MER0021759 lspA Rru_A2967
AD A24 unassigned family A24 unassigned peptidases MER0079979 Rru_A0108
AE A31 A31.002 HyaD peptidase MER0024639 Rru_A1164
AE A31 A31.003 HycI peptidase MER0063405 Rru_A0322
CA C96 non-peptidase homologue family C96 non-peptidase homologues MER0745857 Rru_A3023
CD C14 C14.A07 pcp (Dictyostelium discoideum) MER0063881 Rru_A1373
CD C14 unassigned subfamily C14B unassigned peptidases MER0063879 Rru_A0867
CD C14 unassigned subfamily C14B unassigned peptidases MER0063880 Rru_A0868
CD C14 unassigned subfamily C14B unassigned peptidases MER0063882 Rru_A1374
MA M3 unassigned subfamily M3B unassigned peptidases MER0027346 Rru_A2192
MA M32 unassigned family M32 unassigned peptidases MER0024630 Rru_A3232
MA M41 M41.001 FtsH peptidase MER0024627 ftsH Rru_A1098
MA M48 unassigned subfamily M48B unassigned peptidases MER0027453 htpX Rru_A3579
MA M48 unassigned subfamily M48C unassigned peptidases MER0063404 Rru_A0258
MA M48 unassigned subfamily M48C unassigned peptidases MER0063410 Rru_A2425
MA M48 unassigned subfamily M48C unassigned peptidases MER0063411 Rru_A2450
MD M15 non-peptidase homologue subfamily M15A non-peptidase homologues MER0164134 Rru_A2514
MD M15 unassigned subfamily M15D unassigned peptidases MER0063884 Rru_A3762
ME M16 M16.019 YMXG peptidase MER0024624 Rru_A2972
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0054464 Rru_A2973
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0276083 F11_16565
ME M16 unassigned subfamily M16B unassigned peptidases MER0062905 F11_16565
MF M17 unassigned family M17 unassigned peptidases MER0079980 pepA Rru_A0454
MF M17 unassigned family M17 unassigned peptidases MER0024625 Rru_A0138
MF M17 unassigned family M17 unassigned peptidases MER0024635 Rru_A2173
MG M24 M24.001 methionyl aminopeptidase 1 (Escherichia-type) MER0024636 Rru_A0733
MG M24 M24.009 aminopeptidase P1 MER0079984 Rru_A2865
MH M20 M20.009 Mername-AA028 peptidase MER0024642
MH M20 non-peptidase homologue subfamily M20B non-peptidase homologues MER0932813 Rru_A1987
MH M20 non-peptidase homologue subfamily M20D non-peptidase homologues MER0024641
MH M20 unassigned subfamily M20A unassigned peptidases MER0024620 dapE Rru_A3480
MH M20 unassigned family M20D unassigned peptidases MER0024622 Rru_A2871
MH M20 unassigned family M20D unassigned peptidases MER0063406 Rru_A0984
MH M20 unassigned family M20D unassigned peptidases MER0024637 Rru_A1813
MH M42 unassigned family M42 unassigned peptidases MER0024632 Rru_A1987
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0863966 Rru_A3412
MM M50 unassigned subfamily M50B unassigned peptidases MER0062903 Rru_A1593
MM M50 unassigned subfamily M50B unassigned peptidases MER0063409 Rru_A1776
MO M23 M23.009 Mername-AA292 peptidase MER0024628 Rru_A0770
MO M23 M23.951 DipM g.p. (Caulobacter sp.) MER0024631 Rru_A1767
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0063408 Rru_A1660
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0024640 Rru_A0504
MO M23 non-peptidase homologue family M23 non-peptidase homologues MER0063407 Rru_A1233
MP M67 unassigned subfamily M67B unassigned peptidases MER0181052 Rru_A1113
MT M81 unassigned family M81 unassigned peptidases MER0223234 Rru_A1343
MU M103 M103.001 TldD peptidase (Escherichia coli) MER0026104 Rru_A0567
MU M103 M103.UNW family M103 non-peptidase homologues MER0026105 Rru_A0575
NB N6 N06.A01 FlhB protein (Escherichia coli) MER0279367 flhB F11_14470
PA S1 S01.260 B1598 peptidase MER0062901 Rru_A0562
PA S1 S01.442 HtrA stress response protease (Brucella-type) MER0024621 Rru_A2662
PA S1 S01.A08 At5g27660 (Arabidopsis thaliana) MER0024633
PA S1 unassigned subfamily S1A unassigned peptidases MER0488485 F11_02880
PA S1 unassigned subfamily S1C unassigned peptidases MER0024634 Rru_A2201
PA S1 unassigned subfamily S1C unassigned peptidases MER1274646
PA S1 unassigned subfamily S1C unassigned peptidases MER1274524
PA S1 unassigned subfamily S1C unassigned peptidases MER0216375 Rru_A3157
PA S1 unassigned subfamily S1C unassigned peptidases MER0024618 Rru_A0024
PA S1 unassigned family S1 unassigned peptidases MER0210595 Rru_A2291
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0024626 Rru_A0404
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0458638 Rru_A0019
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0458639 Rru_A0230
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0458641 Rru_A2937
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0024629 Rru_A3029
PB C44 unassigned family C44 unassigned peptidases MER0458640 Rru_A1483
PB C44 unassigned family C44 unassigned peptidases MER0458642 Rru_A3121
PB S45 S45.003 cephalosporin C acylase precursor MER0026102 Rru_A1840
PB T1 T01.006 HslV component of HslUV peptidase MER0079985 hslV Rru_A3599
PB T3 T03.001 gamma-glutamyltransferase 1 (bacterial-type) MER0026096 Rru_A0385
PB T3 T03.025 oxamate amidohydrolase proenzyme (Klebsiella pneumonia) MER0026092 Rru_A3318
PB T3 T03.025 oxamate amidohydrolase proenzyme (Klebsiella pneumonia) MER0026100 Rru_A1349
PB T3 non-peptidase homologue family T3 non-peptidase homologues MER1097924 Rru_A2424
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0435928 Rru_A1895
PC C26 C26.964 CTP synthetase MER0450434 pyrG Rru_A1887
PC C26 C26.965 imidazole glycerol phosphate synthase subunit HisH MER0447013 hisH F11_18405
PC C26 C26.A09 At1g25220 (Arabidopsis thaliana)-like peptidase MER0440609 Rru_A3546
PC C26 unassigned family C26 unassigned peptidases MER0450184 Rru_A0299
PC C26 unassigned family C26 unassigned peptidases MER0446837 Rru_A0651
PC C26 unassigned family C26 unassigned peptidases MER0440254 carA Rru_A2885
PC C26 unassigned family C26 unassigned peptidases MER0449221
PC C56 C56.A06 DDB_G0276405 (Dictyostelium discoideum) MER0079981 Rru_A0902
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0163899 Rru_A1577
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0163967 Rru_A1724
PE T5 T05.001 ornithine acetyltransferase precursor MER0117599 argJ Rru_A0394
SB S8 unassigned subfamily S8A unassigned peptidases MER0063883 Rru_A1967
SC S9 unassigned subfamily S9C unassigned peptidases MER0478696 Rru_A2030
SC S9 unassigned family S9 unassigned peptidases MER0998902 Rru_A3406
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER1022080 Rru_A2030
SC S33 S33.001 prolyl aminopeptidase MER0026090 Rru_A0084
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0209937 Rru_A0275
SC S33 unassigned family S33 unassigned peptidases MER0079983 Rru_A2180
SC S33 unassigned family S33 unassigned peptidases MER0209783 Rru_A2707
SC S33 unassigned family S33 unassigned peptidases MER0210349 metX Rru_A3266
SE S11 unassigned family S11 unassigned peptidases MER0025242 Rru_A2113
SE S11 unassigned family S11 unassigned peptidases MER0949853 Rru_A0228
SE S11 unassigned family S11 unassigned peptidases MER0025241 Rru_A1704
SE S12 S12.A23 GYO_0385 g.p. (Bacillus subtilis) MER0421718 Rru_A1250
SE S13 unassigned family S13 unassigned peptidases MER0026095 Rru_A0132
SF S24 S24.001 repressor LexA MER0026106 lexA Rru_A1898
SF S24 unassigned family S24 unassigned peptidases MER1041073 Rru_A1024
SF S26 S26.001 signal peptidase I MER0026103 Rru_A1853
SJ S16 S16.001 Lon-A peptidase MER0026098 Rru_A1552
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0476553 Rru_A0406
SJ S16 S16.A10 ycbZ (Escherichia coli) MER0026091
SK S14 S14.001 peptidase Clp (type 1) MER0026099 clpP Rru_A1550
SK S41 S41.004 C-terminal processing peptidase-3 MER0062902 Rru_A1232
SK S41 unassigned subfamily S41A unassigned peptidases MER0026097 Rru_A3204
SK S49 unassigned subfamily S49A unassigned peptidases MER1351977
SK S49 unassigned subfamily S49B unassigned peptidases MER0026094 Rru_A2621
SK S49 unassigned subfamily S49B unassigned peptidases MER0026101 Rru_A2055
ST S54 unassigned family S54 unassigned peptidases MER1080634 Rru_A3565
U- U32 U32.A01 YhbV protein (Escherichia coli) MER0063412 Rru_A2524
U- U32 unassigned family U32 unassigned peptidases MER0063413 Rru_A2525
U- U56 U56.001 homomultimeric peptidase MER0140979 Rru_A0974

GENOME ANALYSIS: Comparison with 21 completely sequenced genomes from family Rhodospirillaceae
Family Comment
C96 significant presence (1 homologues)
M38 significant decrease in homologues (1 homologues)
M67 significant presence (1 homologues)
M81 significant presence (1 homologues)
S14 significant decrease in homologues (1 homologues)
U56 significant presence (1 homologues)

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