Rhodococcus equi

Taxonomy
Taxonomy database identifier: 43767
Superkingdom Bacteria
Phylum Firmicutes
Class Actinobacteria
Subclass Actinobacteridae
Order Actinomycetales
Species equi
Suborder Corynebacterineae
Family Nocardiaceae
Genus Rhodococcus
Peptidase View peptidase sequences from Rhodococcus equi
Count of known and putative peptidases: 153, non-peptidase homologues 62
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AC A8 unassigned family A8 unassigned peptidases MER0226948 lspA REQ_27630
AD A24 unassigned subfamily A24A unassigned peptidases MER0226912 HMPREF0724_10917 REQ_18350
AE A31 unassigned family A31 unassigned peptidases MER0701242 HMPREF0724_11254
AE A31 unassigned family A31 unassigned peptidases MER0227011 hupD REQ_41740
CL C82 unassigned subfamily C82A unassigned peptidases MER0227019 REQ_42450
CL C82 unassigned subfamily C82A unassigned peptidases MER0226969
CO C40 C40.007 YddH peptidase MER0226949 REQ_28170
CO C40 unassigned family C40 unassigned peptidases MER0226930 REQ_22450
CO C40 unassigned family C40 unassigned peptidases MER0226950 HMPREF0724_14392
CO C40 unassigned family C40 unassigned peptidases MER0226953 REQ_28500
CO C40 unassigned family C40 unassigned peptidases MER0226980 REQ_34260
CO C40 unassigned family C40 unassigned peptidases MER0226898 REQ_15070
CO C40 unassigned family C40 unassigned peptidases MER0226887 HMPREF0724_14042
CO C40 unassigned family C40 unassigned peptidases MER0454067
G- G5 unassigned family G5 unassigned peptidases MER0937169 HMPREF0724_13974/REQ_13550
G- G5 unassigned family G5 unassigned peptidases MER0939917 HMPREF0724_10511
G- G5 unassigned family G5 unassigned peptidases MER0939104 HMPREF0724_12251/REQ_08370
G- G5 unassigned family G5 unassigned peptidases MER0937599 HMPREF0724_11962
MA M1 M01.009 aminopeptidase N (actinomycete-type) MER0226965 REQ_30120
MA M1 M01.012 aminopeptidase G MER0079644 pepD/pepN HMPREF0724_10319
MA M1 M01.033 lysyl endopeptidase (Streptomyces albulus) MER0226866 REQ_05550
MA M13 M13.009 Zmp1 peptidase (Mycobacterium-type) MER1225260
MA M13 M13.009 Zmp1 peptidase (Mycobacterium-type) MER0227018 HMPREF0724_14680
MA M41 M41.015 MsFtsH g.p. (Mycobacterium smegmatis) MER0226869 ftsH REQ_05840
MA M48 non-peptidase homologue subfamily M48B non-peptidase homologues MER0888639 REQ_21250
MA M48 unassigned subfamily M48B unassigned peptidases MER0887584 HMPREF0724_10066
MA M48 unassigned subfamily M48B unassigned peptidases MER0226994 htpX REQ_36930
MA M48 unassigned subfamily M48B unassigned peptidases MER0227009 REQ_41530
MD M15 M15.011 vanX D-Ala-D-Ala dipeptidase MER0919054 UF75_0096
ME M16 non-peptidase homologue family M16 non-peptidase homologues MER0226918 REQ_19310
ME M16 unassigned subfamily M16B unassigned peptidases MER0790859
ME M16 unassigned subfamily M16B unassigned peptidases MER0226917 REQ_19310
MF M17 unassigned family M17 unassigned peptidases MER0226952 pepA REQ_28400
MG M24 M24.A06 At4g37040 (Arabidopsis thaliana)-type peptidase MER0226913 map REQ_18600
MG M24 unassigned subfamily M24A unassigned peptidases MER0226993 map HMPREF0724_12932
MG M24 unassigned subfamily M24A unassigned peptidases MER0226851 map3 HMPREF0724_12602
MG M24 unassigned subfamily M24B unassigned peptidases MER0226925 REQ_21600
MG M24 unassigned subfamily M24B unassigned peptidases MER0226936 REQ_23400
MH M18 unassigned family M18 unassigned peptidases MER1181494
MH M18 unassigned family M18 unassigned peptidases MER1179654
MH M18 unassigned family M18 unassigned peptidases MER1181187
MH M18 unassigned family M18 unassigned peptidases MER0226876 apeB REQ_08340
MH M20 non-peptidase homologue subfamily M20A non-peptidase homologues MER1230680
MH M20 non-peptidase homologue subfamily M20A non-peptidase homologues MER1226887
MH M20 non-peptidase homologue subfamily M20D non-peptidase homologues MER0226979 REQ_34180
MH M20 non-peptidase homologue family M20 non-peptidase homologues MER0843705 HMPREF0724_10621
MH M20 non-peptidase homologue family M20 non-peptidase homologues MER0239154 gltCP HMPREF0724_10617
MH M20 non-peptidase homologue family M20 non-peptidase homologues MER0226845 REQ_00750
MH M20 non-peptidase homologue family M20 non-peptidase homologues MER0227029 REQ_43400
MH M20 unassigned subfamily M20A unassigned peptidases MER0226891 dapE HMPREF0724_13894
MH M20 unassigned family M20D unassigned peptidases MER0226860 REQ_04660
MH M20 unassigned family M20D unassigned peptidases MER0226903 REQ_17050
MH M20 unassigned family M20D unassigned peptidases MER0226978 REQ_34170
MH M20 unassigned family M20D unassigned peptidases MER0372967 HMPREF0724_10732
MH M20 unassigned family M20D unassigned peptidases MER0374816 HMPREF0724_13070
MH M20 unassigned family M20D unassigned peptidases MER0227014 REQ_42110
MH M20 unassigned subfamily M20F unassigned peptidases MER0226970 REQ_30750
MH M20 unassigned family M20 unassigned peptidases MER0226932 REQ_22840
MH M28 unassigned subfamily M28A unassigned peptidases MER0546691
MH M28 unassigned subfamily M28A unassigned peptidases MER0191616 HMPREF0724_11417
MJ M38 M38.982 urease MER0227040 ureC REQ_45390
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0865214 HMPREF0724_13669/REQ_10580
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0226926 pyrC REQ_21650
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0226976 REQ_33380
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0227013
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0227023 REQ_42910
MJ M38 unassigned family M38 unassigned peptidases MER0226971 REQ_30890
MM M50 M50.005 protein Rv2869c (Mycobacterium tuberculosis)-type peptidase MER0226911 REQ_18320
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0479929 REQ_18180
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0226929 REQ_22450
MO M23 unassigned subfamily M23B unassigned peptidases MER0013600 orf36 pVapA_0140
MO M23 unassigned subfamily M23B unassigned peptidases MER0226881 REQ_10850
MO M23 unassigned subfamily M23B unassigned peptidases MER0226885 REQ_11330
MO M23 unassigned subfamily M23B unassigned peptidases MER0226924 REQ_21280
MO M23 unassigned subfamily M23B unassigned peptidases MER0227041 REQ_45540
MU M103 M103.UNW family M103 non-peptidase homologues MER0226937 REQ_23710
MU M103 M103.UPW family M103 unassigned peptidases MER0226938 REQ_23720
PA S1 S01.494 Htra2 peptidase (Mycobacterium-type) MER0226886 REQ_11660
PA S1 S01.513 MarP peptidase (Mycobacterium tuberculosis) MER0226864 REQ_05200
PA S1 unassigned subfamily S1C unassigned peptidases MER0904151 REQ_14480
PA S1 unassigned subfamily S1C unassigned peptidases MER0226892 HMPREF0724_13879/htrA REQ_14480
PA S1 unassigned subfamily S1C unassigned peptidases MER0226853 REQ_02370
PA S1 unassigned subfamily S1C unassigned peptidases MER0227025 REQ_43020
PA S1 unassigned subfamily S1E unassigned peptidases MER0227005 REQ_40420
PA S1 unassigned subfamily S1E unassigned peptidases MER0227006 REQ_40430
PA S1 unassigned subfamily S1E unassigned peptidases MER0227008 REQ_40780
PA S1 unassigned family S1 unassigned peptidases MER0226900 REQ_15830
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0226877 purF REQ_08400
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0458257 gltA1 REQ_00440
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0458258 gltA2 REQ_25340
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0226991 glmS REQ_35360
PB C44 unassigned family C44 unassigned peptidases MER0226858 asnB1 REQ_04640
PB C44 unassigned family C44 unassigned peptidases MER0226951 asnB2 REQ_28300
PB C44 unassigned family C44 unassigned peptidases MER0227003 REQ_39490
PB T1 T01.005 bacterial proteasome, beta component MER0226934 prcB REQ_23280
PB T1 T01.980 bacterial proteasome, alpha subunit MER0226935 prcA REQ_23290
PB T1 unassigned subfamily T1A unassigned peptidases MER1363326
PB T1 unassigned subfamily T1A unassigned peptidases MER1364003
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0226843 REQ_00220
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0226940 REQ_23850
PC C26 C26.957 GMP synthase MER0226985 guaA REQ_34900
PC C26 C26.959 TRP3 protein MER0436418
PC C26 C26.964 CTP synthetase MER0451936
PC C26 C26.965 imidazole glycerol phosphate synthase subunit HisH MER0226946 hisH REQ_26740
PC C26 C26.A25 trp1 (Schizosaccharomyces pombe) MER0439407
PC C26 C26.A32 imidazoleglycerol-phosphate synthase (Pyrococcus furiosus) MER0226923 pdxT REQ_20830
PC C26 unassigned family C26 unassigned peptidases MER0226927 carA REQ_21670
PC C56 C56.001 PfpI peptidase MER0226862 REQ_04960
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0731085 HMPREF0724_10303/REQ_46090
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0227038 REQ_45160
PC S51 non-peptidase homologue family S51 non-peptidase homologues MER0226902 REQ_16840
PE P1 P01.101 pantetheinyl hydrolase ThnT precursor MER0226907 REQ_17870
PE T5 unassigned family T5 unassigned peptidases MER0226941 argJ HMPREF0724_11720
SB S8 S08.131 mycosin-1 MER0226992 REQ_35490
SB S8 unassigned subfamily S8A unassigned peptidases MER0226931 REQ_22830
SC S9 S09.010 oligopeptidase B MER0226875 REQ_08090
SC S9 S09.072 puromycin hydrolase MER0227007 REQ_40480
SC S9 S09.948 para-nitrobenzyl esterase (Bacillus subtilis) MER0226884 REQ_11130
SC S9 S09.986 carboxylesterase-related protein MER0226883 REQ_11120
SC S9 non-peptidase homologue subfamily S9C non-peptidase homologues MER0226894 REQ_14670
SC S9 non-peptidase homologue subfamily S9C non-peptidase homologues MER0227036 REQ_44770
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0226854 REQ_02570
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0226899 REQ_15690
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0226999 REQ_38570
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0227031 REQ_43790
SC S9 unassigned subfamily S9A unassigned peptidases MER0226998 REQ_38560
SC S9 unassigned subfamily S9B unassigned peptidases MER0404847
SC S9 unassigned subfamily S9C unassigned peptidases MER1302783
SC S9 unassigned subfamily S9C unassigned peptidases MER1303637
SC S9 unassigned subfamily S9C unassigned peptidases MER0226962 REQ_29920
SC S9 unassigned family S9 unassigned peptidases MER0226847 REQ_00790
SC S9 unassigned family S9 unassigned peptidases MER0226848 REQ_01060
SC S9 unassigned family S9 unassigned peptidases MER0226859 REQ_04650
SC S9 unassigned family S9 unassigned peptidases MER0226863 REQ_05120
SC S9 unassigned family S9 unassigned peptidases MER0226872 REQ_06570
SC S9 unassigned family S9 unassigned peptidases MER0226878 REQ_09200
SC S9 unassigned family S9 unassigned peptidases MER0226889 REQ_13620
SC S9 unassigned family S9 unassigned peptidases MER0226890 REQ_13650
SC S9 unassigned family S9 unassigned peptidases MER0226901 REQ_15880
SC S9 unassigned family S9 unassigned peptidases MER0226921 REQ_20570
SC S9 unassigned family S9 unassigned peptidases MER0226947 REQ_27590
SC S9 unassigned family S9 unassigned peptidases MER0226960 REQ_29310
SC S9 unassigned family S9 unassigned peptidases MER0227024 REQ_42920
SC S9 unassigned family S9 unassigned peptidases MER0227033 REQ_44170
SC S9 unassigned family S9 unassigned peptidases MER0227037 REQ_44890
SC S9 unassigned family S9 unassigned peptidases MER0326499
SC S15 unassigned family S15 unassigned peptidases MER0226844 REQ_00570
SC S33 S33.001 prolyl aminopeptidase MER0226955 REQ_28670
SC S33 S33.001 prolyl aminopeptidase MER0226973 pip HMPREF0724_13261
SC S33 S33.016 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (Burkholderia-type) MER0226873 REQ_06810
SC S33 S33.023 Hip1 peptidase (Mycobacterium tuberculosis) MER0226954 REQ_28640
SC S33 S33.974 similar to hypothetical protein FLJ22408 MER0226856 REQ_03790
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0226841 REQ_00080
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0226855 REQ_02590
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0226865 REQ_05210
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0226893 REQ_14610
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0226904 REQ_17100
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0226922 REQ_20670
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0226928 REQ_22100
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0226943 REQ_25760
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0226944 REQ_25860
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0226967 REQ_30560
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0226975 HMPREF0724_13220
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0227015 REQ_42190
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0227026 REQ_43200
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0227027 REQ_43300
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0227028 REQ_43380
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0227035 REQ_44450
SC S33 unassigned family S33 unassigned peptidases MER1343018
SC S33 unassigned family S33 unassigned peptidases MER0226846 REQ_00770
SC S33 unassigned family S33 unassigned peptidases MER0226849 REQ_01450
SC S33 unassigned family S33 unassigned peptidases MER0226852 REQ_02210
SC S33 unassigned family S33 unassigned peptidases MER0226857 REQ_04540
SC S33 unassigned family S33 unassigned peptidases MER0226861 REQ_04860
SC S33 unassigned family S33 unassigned peptidases MER0226870 REQ_06220
SC S33 unassigned family S33 unassigned peptidases MER0226874 REQ_07620
SC S33 unassigned family S33 unassigned peptidases MER0226895 REQ_14770
SC S33 unassigned family S33 unassigned peptidases MER0226896 REQ_14830
SC S33 unassigned family S33 unassigned peptidases MER0226897 REQ_14990
SC S33 unassigned family S33 unassigned peptidases MER0226905 REQ_17210
SC S33 unassigned family S33 unassigned peptidases MER0226915 REQ_18710
SC S33 unassigned family S33 unassigned peptidases MER0226920 REQ_20080
SC S33 unassigned family S33 unassigned peptidases MER0226942 REQ_25250
SC S33 unassigned family S33 unassigned peptidases MER0226966 REQ_30250
SC S33 unassigned family S33 unassigned peptidases MER0226977 pcaL REQ_33590
SC S33 unassigned family S33 unassigned peptidases MER0226982 metA REQ_34440
SC S33 unassigned family S33 unassigned peptidases MER0226984 REQ_34790
SC S33 unassigned family S33 unassigned peptidases MER0226986 REQ_35100
SC S33 unassigned family S33 unassigned peptidases MER0226987 REQ_35190
SC S33 unassigned family S33 unassigned peptidases MER0226990 REQ_35310
SC S33 unassigned family S33 unassigned peptidases MER0226995 REQ_37860
SC S33 unassigned family S33 unassigned peptidases MER0226996 REQ_38010
SC S33 unassigned family S33 unassigned peptidases MER0226997 REQ_38130
SC S33 unassigned family S33 unassigned peptidases MER0227002 REQ_39380
SC S33 unassigned family S33 unassigned peptidases MER0227012 REQ_41880
SC S33 unassigned family S33 unassigned peptidases MER0227016 REQ_42200
SC S33 unassigned family S33 unassigned peptidases MER0227017 REQ_42260
SC S33 unassigned family S33 unassigned peptidases MER0227022 REQ_42790
SC S33 unassigned family S33 unassigned peptidases MER0227030 REQ_43450
SC S33 unassigned family S33 unassigned peptidases MER0227032 REQ_43830
SC S33 unassigned family S33 unassigned peptidases MER0227034 REQ_44320
SE S11 S11.002 murein-DD-endopeptidase MER0227039 REQ_45210
SE S11 unassigned family S11 unassigned peptidases MER0226981 REQ_34350
SE S11 unassigned family S11 unassigned peptidases MER0227004 REQ_40330
SE S12 S12.006 class C beta-lactamase MER0226961 REQ_29450
SE S12 S12.950 esterase EstB MER0226983 REQ_34700
SE S12 S12.A11 lact-2 g.p. (Caenorhabditis elegans) MER0227001 REQ_39270
SE S12 S12.A11 lact-2 g.p. (Caenorhabditis elegans) MER0227021 REQ_42480
SE S12 unassigned family S12 unassigned peptidases MER1308363
SE S12 unassigned family S12 unassigned peptidases MER0470104
SE S12 unassigned family S12 unassigned peptidases MER0226850 REQ_01680
SE S12 unassigned family S12 unassigned peptidases MER0226888 REQ_13020
SE S12 unassigned family S12 unassigned peptidases MER0226914 HMPREF0724_10890
SE S12 unassigned family S12 unassigned peptidases MER0226945 REQ_26610
SE S12 unassigned family S12 unassigned peptidases MER0226956 REQ_29000
SE S13 S13.004 penillin-binding protein 4 MER0226868 dacB HMPREF0724_12650
SF S24 S24.001 repressor LexA MER0226919 lexA HMPREF0724_10195
SF S24 S24.001 repressor LexA MER0226867 lexA2 HMPREF0724_12652
SF S24 unassigned family S24 unassigned peptidases MER1330290
SF S26 S26.011 signal peptidase SipW (Bacillus-type) MER0226880 REQ_09620
SF S26 S26.011 signal peptidase SipW (Bacillus-type) MER0226957 REQ_29160
SF S26 S26.024 signal peptidase (Mycobacterium tuberculosis-type) MER0226909 REQ_18060
SF S26 unassigned subfamily S26B unassigned peptidases MER1052453 HMPREF0724_12056
SF S26 unassigned subfamily S26B unassigned peptidases MER1053112 HMPREF0724_12058
SF S26 unassigned subfamily S26B unassigned peptidases MER0226879 REQ_09560
SF S26 unassigned subfamily S26B unassigned peptidases MER0226958 REQ_29180
SJ S16 S16.012 SepM peptidase (Streptococcus mutans) MER0226974 REQ_32640
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0226871 radA REQ_06280
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER0226910 REQ_18110
SJ S16 unassigned family S16 unassigned peptidases MER0226916 REQ_18730
SK S14 S14.008 ClpP1 peptidase (Streptomyces-type) MER0226964 clpP/clpP1 REQ_30020
SK S14 S14.009 ClpP2 peptidase (Streptomyces-type) MER0226963 clpP HMPREF0724_13496
SK S14 non-peptidase homologue family S14 non-peptidase homologues MER0491650
SK S49 non-peptidase homologue subfamily S49A unassigned non-peptidase homologues MER1069159 clpP
ST S54 S54.029 rhomboid peptidase 2 (Mycobacterium sp.) MER0226908 REQ_17880
ST S54 S54.A08 At1g25290 (Arabidopsis thaliana) MER0226842 REQ_00180
ST S54 unassigned family S54 unassigned peptidases MER1079524 HMPREF0724_14950
U- U56 U56.001 homomultimeric peptidase MER0226882 HMPREF0724_13641
U- U72 U72.001 Dop isopeptidase MER0398055
U- U72 unassigned family U72 unassigned peptidases MER0402776

GENOME ANALYSIS: Comparison with 19 completely sequenced genomes from genus Rhodococcus
Family Comment
A24 significant decrease in homologues (1 homologues)
C26 significant decrease in homologues (9 homologues)
C40 significant decrease in homologues (8 homologues)
C44 significant decrease in homologues (7 homologues)
C56 significant decrease in homologues (3 homologues)
C82 significant decrease in homologues (2 homologues)
M15 significant presence (1 homologues)
M23 significant decrease in homologues (7 homologues)
M38 significant decrease in homologues (7 homologues)
M50 significant decrease in homologues (1 homologues)
S1 significant decrease in homologues (10 homologues)
S9 significant decrease in homologues (31 homologues)
S11 significant decrease in homologues (3 homologues)
S14 significant decrease in homologues (3 homologues)
S15 significant decrease in homologues (1 homologues)
S16 lineage specific expansion (4 homologues)
S33 significant decrease in homologues (54 homologues)
S49 significant presence (1 homologues)