Methanococcus maripaludis

Taxonomy
Taxonomy database identifier: 39152
Superkingdom		Archaea
Phylum		Euryarchaeota
Class		Methanococci
Order		Methanococcales
Family		Methanococcaceae
Genus		Methanococcus
Species		maripaludis
Peptidase			View peptidase sequences from Methanococcus maripaludis
Count of known and putative peptidases: 53, non-peptidase homologues 15
Completely sequences genomes from subspecies and strains				Protein coding genes
	To show all strains with completely sequenced genomes, click here.

Clan	Family	MEROPS ID	Peptidase or homologue (subtype)	MERNUM	Gene	Locus
AD	A24	A24.016	FlaK peptidase	MER0078598		MmarC6_0338
AD	A24	A24.016	FlaK peptidase	MER0019305	flaK
AD	A24	A24.018	EppA peptidase	MER0078623		MMP0232
AD	A24	A24.018	EppA peptidase	MER0078624
AE	A31	A31.003	HycI peptidase	MER0040966		MmarC7_0432
AE	A31	unassigned	family A31 unassigned peptidases	MER0040964		MmarC5_0648
AE	A31	unassigned	family A31 unassigned peptidases	MER0040965		MmarC7_0582
AE	A31	unassigned	family A31 unassigned peptidases	MER0040963		MmarC7_0628
CA	C1	unassigned	subfamily C1B unassigned peptidases	MER0428419
CA	C1	unassigned	subfamily C1B unassigned peptidases	MER0040953		MMP0812
MA	M48	unassigned	subfamily M48B unassigned peptidases	MER0042360	htpX	GYY_02065
MG	M24	unassigned	subfamily M24A unassigned peptidases	MER0042251
MG	M24	unassigned	subfamily M24B unassigned peptidases	MER0040962
MG	M24	unassigned	subfamily M24B unassigned peptidases	MER0088337		MmarC5_0386
MG	M24	unassigned	subfamily M24B unassigned peptidases	MER0189928		MmarC6_1468
MH	M20	unassigned	subfamily M20A unassigned peptidases	MER0472365
MH	M20	unassigned	subfamily M20A unassigned peptidases	MER0472342
MH	M20	unassigned	subfamily M20A unassigned peptidases	MER0472426
MH	M20	unassigned	family M20 unassigned peptidases	MER0040960		MMP1398
MH	M42	unassigned	family M42 unassigned peptidases	MER0014707		MmarC6_1551
MJ	M38	non-peptidase homologue	family M38 non-peptidase homologues	MER0859878
MJ	M38	non-peptidase homologue	family M38 non-peptidase homologues	MER0860156
MJ	M38	non-peptidase homologue	family M38 non-peptidase homologues	MER0042707
MJ	M38	unassigned	family M38 unassigned peptidases	MER0042760		MMP0378
MJ	M38	unassigned	family M38 unassigned peptidases	MER0042761	fmdA	MMP0509
MJ	M38	unassigned	family M38 unassigned peptidases	MER0042277	pyrC	MMP1009
MJ	M38	unassigned	family M38 unassigned peptidases	MER0042762	fwdA	MMP1248
MJ	M38	unassigned	family M38 unassigned peptidases	MER0042763		MMP1380
MM	M50	M50.006	MjS2P-type peptidase	MER0042444		MMP0453
MM	M50	non-peptidase homologue	subfamily M50B non-peptidase homologues	MER0890125
MM	M50	non-peptidase homologue	subfamily M50B non-peptidase homologues	MER0890410
MM	M50	unassigned	subfamily M50B unassigned peptidases	MER0894454
MM	M50	unassigned	subfamily M50B unassigned peptidases	MER0891700
MM	M50	unassigned	subfamily M50B unassigned peptidases	MER0889945
MM	M50	unassigned	subfamily M50B unassigned peptidases	MER0894369
MM	M50	unassigned	subfamily M50B unassigned peptidases	MER0042445		MMP1517
MM	M50	unassigned	family M50 unassigned peptidases	MER0042443		MMP0169
PA	S1	unassigned	subfamily S1C unassigned peptidases	MER0101296		MmarC6_0140
PA	S1	unassigned	subfamily S1C unassigned peptidases	MER0088339		MmarC6_0142
PA	S1	unassigned	subfamily S1C unassigned peptidases	MER0217021
PA	S1	unassigned	subfamily S1C unassigned peptidases	MER0216798
PA	S1	unassigned	subfamily S1C unassigned peptidases	MER0216935
PB	C44	C44.001	amidophosphoribosyltransferase precursor	MER0041896	asnB	MMP0918
PB	C44	C44.001	amidophosphoribosyltransferase precursor	MER0041897	purF	MMP1146
PB	C44	C44.A09	PF0204 protein (Pyrococcus furiosus )	MER0038389
PB	C44	unassigned	family C44 unassigned peptidases	MER0040956		MMP1084
PB	C44	unassigned	family C44 unassigned peptidases	MER0041898		MmarC7_0953
PB	C44	unassigned	family C44 unassigned peptidases	MER0457962
PB	T1	T01.002	archaean proteasome, beta component	MER0042508	psmB	MmarC6_0189
PB	T1	unassigned	family T1 unassigned peptidases	MER0042534	psmA	MMP0251
PC	C26	C26.959	TRP3 protein	MER0040954	trpG	MMP1005
PC	C26	C26.959	TRP3 protein	MER0438648
PC	C26	C26.964	CTP synthetase	MER0447991
PC	C26	C26.965	imidazole glycerol phosphate synthase subunit HisH	MER0255386
PC	C26	C26.A31	GMP synthase (Pyrococcus furiosus)	MER0040955
PC	C26	C26.A32	imidazoleglycerol-phosphate synthase (Pyrococcus furiosus)	MER0448342
PC	C26	unassigned	family C26 unassigned peptidases	MER0255407
PC	C56	non-peptidase homologue	family C56 non-peptidase homologues	MER0040958		MMP0559
PC	C56	non-peptidase homologue	family C56 non-peptidase homologues	MER0186023		MmarC7_1578
PC	C56	non-peptidase homologue	family C56 non-peptidase homologues	MER0255441
PE	T5	T05.002	ArgJ protein (archea)	MER0042551
SB	S8	unassigned	subfamily S8A unassigned peptidases	MER0255298
SC	S9	non-peptidase homologue	family S9 non-peptidase homologues	MER0040967		MMP0792
SC	S9	unassigned	family S9 unassigned peptidases	MER0038351		MMP0191
SF	S26	S26.017	archaean signal peptidase (Euryarchaeota)	MER0048271		MMP0387
SF	S26	S26.017	archaean signal peptidase (Euryarchaeota)	MER0088342
SF	S26	unassigned	subfamily S26B unassigned peptidases	MER1052396
SJ	S16	S16.008	protease La (Methanocaldococcus-type)	MER0040968	lon	MMP1186
SJ	S16	S16.A12	PF1438 (Pyrococcus furiosus)	MER0040969		MMP1062
SJ	S16	S16.A12	PF1438 (Pyrococcus furiosus)	MER0473845
SK	S14	non-peptidase homologue	family S14 non-peptidase homologues	MER0255361
SK	S49	non-peptidase homologue	subfamily S49A unassigned non-peptidase homologues	MER1065930
SK	S49	unassigned	subfamily S49B unassigned peptidases	MER0088338		MmarC6_1590
SK	S49	unassigned	subfamily S49B unassigned peptidases	MER0040970		MMP1069
U-	U32	unassigned	family U32 unassigned peptidases	MER0040971		MmarC5_0916

GENOME ANALYSIS: Comparison with 10 completely sequenced genomes from order Methanococcales
Family	Comment
C1	significant presence (2 homologues)
C44	lineage specific expansion (6 homologues)
G5	significant presence (1 homologues)
M20	lineage specific expansion (4 homologues)
M24	lineage specific expansion (4 homologues)
M38	lineage specific expansion (8 homologues)
M50	lineage specific expansion (9 homologues)
S1	lineage specific expansion (5 homologues)
S8	significant presence (1 homologues)