Clostridium beijerinckii

Taxonomy
Taxonomy database identifier: 1520
Superkingdom Bacteria
Phylum Firmicutes
Class Clostridia
Order Clostridiales
Family Clostridiaceae
Genus Clostridium
Species beijerinckii
Peptidase View peptidase sequences from Clostridium beijerinckii
Count of known and putative peptidases: 126, non-peptidase homologues 33
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
A- A36 unassigned family A36 unassigned peptidases MER0001667 Cbei_1119
AD A24 unassigned family A24 unassigned peptidases MER0642567 LF65_04729
AD A24 unassigned family A24 unassigned peptidases MER0055364 Cbei_4219
AE A25 A25.001 gpr peptidase MER0002697 gpr Cbei_0822
AE A31 unassigned family A31 unassigned peptidases MER0082963
C- C75 unassigned family C75 unassigned peptidases MER0124123 Cbei_4578
CA C1 unassigned subfamily C1B unassigned peptidases MER0055953 Cbei_3836
CA C110 C110.UPW family C110 unassigned peptidases MER0626614
CA C110 C110.UPW family C110 unassigned peptidases MER0627066
CA C110 C110.UPW family C110 unassigned peptidases MER0627239
CA C110 C110.UPW family C110 unassigned peptidases MER0627088
CA C110 C110.UPW family C110 unassigned peptidases MER0627292
CD C11 unassigned subfamily C11A unassigned peptidases MER1169546
CL C82 C82.003 ykuD transpeptidase MER0461331 Cbei_2287
CL C82 non-peptidase homologue subfamily C82A non-peptidase homologues MER0738863 Cbei_1526/LF65_01741
CL C82 unassigned subfamily C82A unassigned peptidases MER0122565 Cbei_0756
CL C82 unassigned subfamily C82A unassigned peptidases MER0139437 Cbei_0757
CL C82 unassigned subfamily C82A unassigned peptidases MER0122446 Cbei_4104
CL C82 unassigned subfamily C82A unassigned peptidases MER0140286 Cbei_4106
CO C40 C40.001 dipeptidyl-peptidase VI (bacteria) MER0107896 Cbei_2533
CO C40 C40.006 PgpA peptidase MER0002869 Cbei_0487
CO C40 non-peptidase homologue family C40 non-peptidase homologues MER0722128 LF65_05686
CO C40 non-peptidase homologue family C40 non-peptidase homologues MER0004007
CO C40 unassigned family C40 unassigned peptidases MER0720594 LF65_03097
CO C40 unassigned family C40 unassigned peptidases MER0719895 LF65_01597
CO C40 unassigned family C40 unassigned peptidases MER0725113 LF65_02356
CO C40 unassigned family C40 unassigned peptidases MER0117146 Cbei_2971
CO C40 unassigned family C40 unassigned peptidases MER0766474
CO C40 unassigned family C40 unassigned peptidases MER0762968
CO C40 unassigned family C40 unassigned peptidases MER0001652 Cbei_1242
CO C40 unassigned family C40 unassigned peptidases MER0055272 Cbei_2434
CO C40 unassigned family C40 unassigned peptidases MER0055120 Cbei_4888
G- G5 G05.004 microcystinase MlrA MER0055972 Cbei_3462
G- G5 G05.007 MroQ peptidase (Staphylococcus aureus) MER0055130 Cbei_4810
G- G5 unassigned family G5 unassigned peptidases MER0936137 Cbei_2964/LF65_03347
G- G5 unassigned family G5 unassigned peptidases MER0938621 Cbei_2685
G- G5 unassigned family G5 unassigned peptidases MER0055382 Cbei_4202
G- G5 unassigned family G5 unassigned peptidases MER0055936 Cbei_3988
MA M1 non-peptidase homologue family M1 non-peptidase homologues MER0812115 LF65_04340
MA M1 unassigned family M1 unassigned peptidases MER0055951 Cbei_3851
MA M1 unassigned family M1 unassigned peptidases MER0055950 Cbei_3854
MA M3 unassigned subfamily M3B unassigned peptidases MER0002701 Cbei_0773
MA M3 unassigned subfamily M3B unassigned peptidases MER0055351 Cbei_4327
MA M13 non-peptidase homologue family M13 non-peptidase homologues MER0830247 pepO2
MA M13 unassigned family M13 unassigned peptidases MER0003357 Cbei_0367
MA M13 unassigned family M13 unassigned peptidases MER0055024 Cbei_4945
MA M41 M41.009 FtsH-2 peptidase MER0004066 ftsH1 Cbei_0100
MA M41 unassigned family M41 unassigned peptidases MER0082933 ftsH2 Cbei_2530
MA M41 unassigned family M41 unassigned peptidases MER0055269 ftsH Cbei_4783
MA M41 unassigned family M41 unassigned peptidases MER0082964 ftsH3 Cbei_3037
MA M48 unassigned subfamily M48B unassigned peptidases MER0082965 htpX Cbei_2213
MA M56 unassigned family M56 unassigned peptidases MER0119837 Cbei_3103
MA M56 unassigned family M56 unassigned peptidases MER0001904 Cbei_0970
MA M56 unassigned family M56 unassigned peptidases MER0001669 Cbei_1063
MA M78 non-peptidase homologue family M78 non-peptidase homologues MER0908515 LF65_00967
MA M78 non-peptidase homologue family M78 non-peptidase homologues MER0909797 Cbei_0879
MD M15 unassigned subfamily M15B unassigned peptidases MER0055962 Cbei_3664
MD M15 unassigned subfamily M15B unassigned peptidases MER0049778
ME M16 M16.A15 BSSC8_26020 g.p. (Bacillus subtilis) MER0001660 Cbei_1209
ME M16 non-peptidase homologue subfamily M16B non-peptidase homologues MER0870335
ME M16 unassigned subfamily M16B unassigned peptidases MER0082938 Cbei_2401
ME M16 unassigned subfamily M16B unassigned peptidases MER0055898 Cbei_4156
MF M17 unassigned family M17 unassigned peptidases MER0082967 pepA Cbei_2737
MG M24 unassigned subfamily M24A unassigned peptidases MER0004033
MG M24 unassigned subfamily M24A unassigned peptidases MER0055968 Cbei_3615
MG M24 unassigned subfamily M24A unassigned peptidases MER0082942 Cbei_1823
MG M24 unassigned subfamily M24B unassigned peptidases MER0004444 Cbei_0054
MG M24 unassigned subfamily M24B unassigned peptidases MER0004477 Cbei_0053
MG M24 unassigned subfamily M24B unassigned peptidases MER0081050 Cbei_2706
MH M18 unassigned family M18 unassigned peptidases MER0000792 Cbei_1409
MH M18 unassigned family M18 unassigned peptidases MER0055270 Cbei_4774
MH M18 unassigned family M18 unassigned peptidases MER0910459
MH M20 non-peptidase homologue family M20 non-peptidase homologues MER0844365 Cbei_1944
MH M20 unassigned subfamily M20A unassigned peptidases MER0082945 Cbei_1967
MH M20 unassigned subfamily M20B unassigned peptidases MER0082939 Cbei_2428
MH M20 unassigned subfamily M20C unassigned peptidases MER0002872 Cbei_0486
MH M20 unassigned family M20D unassigned peptidases MER0055224 Cbei_4809
MH M20 unassigned family M20D unassigned peptidases MER0000982 Cbei_1386
MH M20 unassigned family M20D unassigned peptidases MER0082966 Cbei_2229
MH M20 unassigned family M20 unassigned peptidases MER0842832 LF65_03388
MH M20 unassigned family M20 unassigned peptidases MER0004065 Cbei_0111
MH M42 unassigned family M42 unassigned peptidases MER0880505 LF65_01966
MH M42 unassigned family M42 unassigned peptidases MER0109579 Cbei_1813
MH M42 unassigned family M42 unassigned peptidases MER0100806 Cbei_2710
MJ M19 unassigned family M19 unassigned peptidases MER0086361 Cbei_2397
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0874949 ade
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0865734 LF65_05451
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0859934 LF65_02140
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0867646 Cbei_1970
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0004005 Cbei_0198
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0001734 Cbei_1002
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0001490 ade1 Cbei_1277
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0055116 Cbei_4937
MJ M38 unassigned family M38 unassigned peptidases MER0860317 Cbei_1942/LF65_02109
MJ M38 unassigned family M38 unassigned peptidases MER0055302 Cbei_4564
MM M50 unassigned subfamily M50B unassigned peptidases MER0001685
MM M50 unassigned subfamily M50B unassigned peptidases MER0002934 Cbei_0437
MM M50 unassigned family M50 unassigned peptidases MER0903407 LF65_01322
MM M50 unassigned family M50 unassigned peptidases MER0001661 Cbei_1196 Cbei_1196
MM M50 unassigned family M50 unassigned peptidases MER0002864 Cbei_0501
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0002940 Cbei_0423
MP M67 unassigned subfamily M67B unassigned peptidases MER0907101 LF65_03276
MQ M29 M29.002 aminopeptidase II (Bacillus-type) MER0055926 Cbei_4040
MQ M29 unassigned family M29 unassigned peptidases MER0002700 Cbei_0800
MU M103 M103.UNW family M103 non-peptidase homologues MER0003209 Cbei_0370
MU M103 M103.UPW family M103 unassigned peptidases MER0003211 Cbei_0369
NB N6 unassigned family N6 unassigned peptide lyases MER0327303
PA S1 unassigned subfamily S1C unassigned peptidases MER0003206 Cbei_0379
PA S55 S55.001 SpoIVB peptidase MER0107805 Cbei_1711
PA S55 S55.001 SpoIVB peptidase MER0011043 spoIVB
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0001670 Cbei_1056
PB C44 C44.003 glutamate synthase (NADPH) large chain MER0055380 Cbei_4204
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0003994 Cbei_0246
PB C44 unassigned family C44 unassigned peptidases MER0001683 Cbei_1034
PB C45 unassigned family C45 unassigned peptidases MER0055973 Cbei_3454
PB C59 C59.001 penicillin V acylase precursor MER0055960 Cbei_3673
PB C59 unassigned family C59 unassigned peptidases MER0913973 LF65_04162
PC C26 C26.955 aminodeoxychorismate synthase, subunit II MER0055914 Cbei_4120
PC C26 C26.957 GMP synthase MER0003925 guaA Cbei_0332
PC C26 C26.959 TRP3 protein MER0435744 Cbei_1750
PC C26 C26.964 CTP synthetase MER0002975 pyrG Cbei_0398
PC C26 C26.965 imidazole glycerol phosphate synthase subunit HisH MER0001444 Cbei_1320
PC C26 C26.A28 SPBPB2B2.05 (Schizosaccharomyces pombe) MER0002335 Cbei_0859
PC C26 C26.A32 imidazoleglycerol-phosphate synthase (Pyrococcus furiosus) MER0054770 pdxT Cbei_5039
PC C26 unassigned family C26 unassigned peptidases MER0439247 carA Cbei_0028
PC C56 C56.972 phosphoribosylformylglycinamidine synthase MER0001671 Cbei_1053
PC C56 C56.A06 DDB_G0276405 (Dictyostelium discoideum) MER0055917 Cbei_4062
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0055981 Cbei_3140
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0055978 Cbei_3229
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0055954 Cbei_3829
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0055362 Cbei_4322
PC S51 S51.003 cyanophycinase MER0003114 Cbei_0392
PC S51 non-peptidase homologue family S51 non-peptidase homologues MER1062270 LF65_03738
PE T5 T05.002 ArgJ protein (archea) MER0055303 Cbei_4518
SB S8 non-peptidase homologue subfamily S8A non-peptidase homologues MER0969690 Cbei_1854/LF65_02014
SB S8 non-peptidase homologue subfamily S8A non-peptidase homologues MER1284130
SB S8 non-peptidase homologue subfamily S8A non-peptidase homologues MER1277477
SB S8 non-peptidase homologue subfamily S8A non-peptidase homologues MER1283358
SB S8 non-peptidase homologue subfamily S8A non-peptidase homologues MER1281428
SB S8 non-peptidase homologue subfamily S8A non-peptidase homologues MER1277708
SB S8 unassigned subfamily S8A unassigned peptidases MER0969655 LF65_00337
SB S8 unassigned subfamily S8A unassigned peptidases MER0972454 LF65_01166
SB S8 unassigned subfamily S8A unassigned peptidases MER0054768 Cbei_5067
SB S8 unassigned subfamily S8A unassigned peptidases MER0004596 Cbei_0036
SB S8 unassigned subfamily S8A unassigned peptidases MER0002480 Cbei_0857
SB S8 unassigned subfamily S8A unassigned peptidases MER0002469 Cbei_0858
SB S8 unassigned subfamily S8A unassigned peptidases MER0000782 Cbei_1436
SB S8 unassigned subfamily S8A unassigned peptidases MER0000776 Cbei_1454
SB S8 unassigned subfamily S8A unassigned peptidases MER0000769 Cbei_1456
SB S8 unassigned subfamily S8A unassigned peptidases MER0055944 Cbei_3962
SB S8 unassigned subfamily S8B unassigned peptidases MER1291456
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0054780
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0215365 Cbei_0255
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0003968 Cbei_0272
SC S9 non-peptidase homologue family S9 non-peptidase homologues MER0055979 Cbei_3182
SC S9 unassigned subfamily S9C unassigned peptidases MER0001465 Cbei_1291
SC S9 unassigned subfamily S9D unassigned peptidases MER0055976 Cbei_3272
SC S9 unassigned family S9 unassigned peptidases MER0000800 Cbei_1396
SC S15 unassigned family S15 unassigned peptidases MER1024292 Cbei_1396/LF65_01490
SC S33 S33.010 SCO7095-type peptidase MER0055963 Cbei_3626
SC S33 S33.010 SCO7095-type peptidase MER0055899 Cbei_4138
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0055949 Cbei_3857
SC S33 unassigned family S33 unassigned peptidases MER0003988 Cbei_0248
SC S33 unassigned family S33 unassigned peptidases MER0001448 Cbei_1305
SC S33 unassigned family S33 unassigned peptidases MER0055977 Cbei_3238
SC S33 unassigned family S33 unassigned peptidases MER0055970 Cbei_3583
SC S33 unassigned family S33 unassigned peptidases MER0055969 Cbei_3584
SC S33 unassigned family S33 unassigned peptidases MER0055947 Cbei_3932
SC S33 unassigned family S33 unassigned peptidases MER0055933 Cbei_3997
SC S33 unassigned family S33 unassigned peptidases MER0055282 Cbei_4654
SE S11 S11.004 K15-type DD-transpeptidase MER0082944 Cbei_1879
SE S11 S11.005 D-Ala-D-Ala carboxypeptidase DacF MER0082943 Cbei_1874
SE S11 non-peptidase homologue family S11 non-peptidase homologues MER0001750 Cbei_0999
SE S11 unassigned family S11 unassigned peptidases MER0002863 Cbei_0519
SE S11 unassigned family S11 unassigned peptidases MER0002143 Cbei_0941
SE S12 unassigned family S12 unassigned peptidases MER1005998 pbpX
SE S12 unassigned family S12 unassigned peptidases MER0055958 Cbei_3699
SF S24 S24.001 repressor LexA MER0082956 lexA Cbei_2561
SF S24 unassigned family S24 unassigned peptidases MER1044392 LF65_02236
SF S24 unassigned family S24 unassigned peptidases MER0082957 Cbei_2575
SF S24 unassigned family S24 unassigned peptidases MER1331609
SF S24 unassigned family S24 unassigned peptidases MER1327919
SF S24 unassigned family S24 unassigned peptidases MER1331989
SF S26 unassigned subfamily S26A unassigned peptidases MER1050589 LF65_04420
SF S26 unassigned subfamily S26A unassigned peptidases MER0055268 Cbei_4785
SF S26 unassigned subfamily S26A unassigned peptidases MER0055267 Cbei_4786
SF S26 unassigned subfamily S26A unassigned peptidases MER0055948 Cbei_3928
SF S26 unassigned subfamily S26A unassigned peptidases MER0055934 Cbei_3996
SH S78 unassigned family S78 unassigned peptidases MER0002206 Cbei_0908
SJ S16 S16.001 Lon-A peptidase MER0001112 Cbei_1330
SJ S16 S16.005 Lon-B peptidase MER0001441 Cbei_1329
SJ S16 S16.005 Lon-B peptidase MER0054767 Cbei_5080
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER0004050 Cbei_0126
SJ S16 unassigned family S16 unassigned peptidases MER0001491
SJ S16 unassigned family S16 unassigned peptidases MER0002698 Cbei_0810
SK S14 S14.001 peptidase Clp (type 1) MER0001442 clpP1 Cbei_1327
SK S14 S14.001 peptidase Clp (type 1) MER0055930 clpP Cbei_4002
SK S14 unassigned family S14 unassigned peptidases MER0001659 Cbei_1212
SK S41 unassigned subfamily S41A unassigned peptidases MER0055122 Cbei_4866
SS S66 S66.001 murein tetrapeptidase LD-carboxypeptidase (Pseudomonas-type) MER0125526 Cbei_2532
SS S66 unassigned family S66 unassigned peptidases MER1085820 Cbei_2422/LF65_03109
ST S54 S54.014 rhomboid YqgP peptidase MER0055355 Cbei_4326
U- U32 U32.002 collagenase (Helicobacter-type) MER0001668 Cbei_1113
U- U32 U32.004 Mername-AA261 putative peptidase (Clostridium beijerinckii) and similar MER0002702 Cbei_0737
U- U32 unassigned family U32 unassigned peptidases MER0003974 Cbei_0253
U- U32 unassigned family U32 unassigned peptidases MER0001970 Cbei_0945
U- U32 unassigned family U32 unassigned peptidases MER0002058 Cbei_0945
U- U57 U57.001 yabG protein (Bacillus-type) MER0003205 Cbei_0388

GENOME ANALYSIS: Comparison with 96 completely sequenced genomes from genus Clostridium
Family Comment
A31 significant presence (1 homologues)
C11 significant presence (1 homologues)
C45 significant presence (1 homologues)
M1 significant presence (3 homologues)
M103 significant presence (2 homologues)
M13 significant presence (3 homologues)
M17 significant presence (1 homologues)
M48 significant presence (1 homologues)
M67 significant presence (1 homologues)
S78 significant presence (1 homologues)