{"metadata":{"accession":"E7A9N6","id":"E7A9N6_HELFC","source_organism":{"taxId":"936155","scientificName":"Helicobacter felis (strain ATCC 49179 / CCUG 28539 / NCTC 12436 / CS1)","fullName":"Helicobacter felis (strain ATCC 49179 / CCUG 28539 / NCTC 12436 / CS1)"},"name":"Transcription-repair-coupling factor","description":["Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site"],"length":988,"sequence":"MIQASLYQALLKGFKSEVLIVQDGAQARQASQVVRFFAPQKALFVFPELRAHYLDDMRAFSAEVSTLLSQLRLFYQAKEAKKDCLLITPLSAILHPLPKPFLCQSFSIQALEACPLSELQTRLRAYGYEFVDMVELPGEVSVRGDIIDIFTPGSSKPHRLSFFGEECEDIKTFDLATQLSDPELLECLEIPPALFSLTEQQRTTLLTRLENLQTHSLVPDIASLGWWVLQDFGVYLWEEYSALLSPEAHQEAQEYASLESIAQLEKILALPQLEHPSGCADLKLPLKNLADFCALHPEHCITLLHRAHASLPPLESPVEFILSDCVLHFSTPTKIFISLHSYPKPPKAKPLNFALSELNSGDFVVHEDYGVGIFQGLVQQNILGSVRDFIALEYQNHDRLFVPVENLHLLERYIAPNTPTLDKLGKGSFSKLKAKMRAELLGLAEDIISAHAARMLLEGVQITPDPTQLKAFHHARPFKLTLDQERAIEEVLGDLASGHVMDRLLNGDVGFGKTEVALVAIFALALAKRQSALFVPTTLLSNQHYASLQARLSPFDITIAKLDRFSRDKARILKDLQEGRIDVVVGTHALLEAKFKDLGLVVVDEEHKFGVKQKEAIKALSQNVHLLSMSATPIPRTLSMALAQIKDISYLATPPESKPPSRTFVKEKTPALLKEIILRELRRKGQVFYIYNHIQSMPSVQKSLQDLLPHLRVEILHSKTPAAQAESLILEFAQGGFELLLCTSIVESGIHLPNANTIIIDHADSFGLADLHQLRGRVGRGTHEGFCYFLVEDKQDLSPSATKRLLALEKNSSLGSGAHIALHDLEIRGGGNLLGSHQSGHIKSIGYALYARMLEDALQEKSGTMQARSSVELKLAVSGFLNAELITSDALRLELYRRLSHCQSSAQVVEIAHEIEDRFGTLDSMSAQFLAIIRIKILANQLGIPKITQHQQHITLHLPNPVYLQAPSKDDNEVLNTLLGYLERAQVC","proteome":"UP000007934","gene":"mfd","go_terms":[{"identifier":"GO:0003676","name":"nucleic acid binding","category":{"code":"F","name":"molecular_function"}},{"identifier":"GO:0005524","name":"ATP binding","category":{"code":"F","name":"molecular_function"}},{"identifier":"GO:0006281","name":"DNA repair","category":{"code":"P","name":"biological_process"}},{"identifier":"GO:0003684","name":"damaged DNA binding","category":{"code":"F","name":"molecular_function"}}],"protein_evidence":3,"source_database":"unreviewed","is_fragment":false,"in_alphafold":true,"in_bfvd":false,"ida_accession":"2c92d1aa0e2f17dc0c3e2e2ccdf5316576ac4916","counters":{"domain_architectures":15971,"entries":33,"isoforms":0,"proteomes":1,"sets":3,"structures":0,"taxa":1,"dbEntries":{"ssf":3,"cathgene3d":5,"pfam":5,"smart":4,"profile":2,"hamap":1,"ncbifam":1,"panther":1,"interpro":11},"proteome":1,"taxonomy":1,"similar_proteins":15971}}}