{"metadata":{"accession":"A4Y952","id":"RLMD_SHEPC","source_organism":{"taxId":"319224","scientificName":"Shewanella putrefaciens (strain CN-32 / ATCC BAA-453)","fullName":"Shewanella putrefaciens (strain CN-32 / ATCC BAA-453)"},"name":"23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD","description":["Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA"],"length":450,"sequence":"MAQFFKAKPNSSKQLSAKLSLNVDQLDHLGAGIAQYQGKVVFIPGALPDETVTVQLTEQKKNYARAKLIKVDAQSPERVEPECPHYHTCGGCDLQHMSLSGQREHKEAALLDIMAKFAGTEGGALSPALTGEGWHYRRRARLATLFDKNTKHLSLGFRAASSSNVVPISQCQVLAKPLSDLIVPFAKLLNQLSAKASLGHLELIAADNGHFAVLRITKALNDKDLAKLSAFAEQHQIYICLQDNEGQFQGVGVELVLPVYQLLDENAQSDAVSLSFTPGNFVQVNSQINKAMVAQAMDWLAPAPDERILDLFCGMGNFSLPLAKMGADVIGVEGVAEMVSQARVNAKANNLDKLTFYHGDLSADLSLEPWMGKIDKLLLDPARAGAFESLQWLKKMKPRKVLYVSCNPASLARDSTVLLERGYRLQRLGLIDMFPQTHHIEAMALFELTK","proteome":null,"gene":"rlmD","go_terms":[{"identifier":"GO:0008173","name":"RNA methyltransferase activity","category":{"code":"F","name":"molecular_function"}},{"identifier":"GO:0006396","name":"RNA processing","category":{"code":"P","name":"biological_process"}},{"identifier":"GO:0003723","name":"RNA binding","category":{"code":"F","name":"molecular_function"}}],"protein_evidence":3,"source_database":"reviewed","is_fragment":false,"in_alphafold":true,"in_bfvd":false,"ida_accession":"4613b20288d0b22a0aa2c4b01699738f5be6fb90","counters":{"domain_architectures":20031,"entries":23,"isoforms":0,"proteomes":0,"sets":3,"structures":0,"taxa":1,"dbEntries":{"cathgene3d":3,"ssf":2,"profile":2,"pfam":2,"cdd":1,"ncbifam":2,"panther":1,"hamap":1,"prosite":2,"interpro":7},"proteome":0,"taxonomy":1,"similar_proteins":20031}}}