{"metadata":{"accession":"A0A6C0VDT0","id":"A0A6C0VDT0_JSRV","source_organism":{"taxId":"11746","scientificName":"Sheep pulmonary adenomatosis virus","fullName":"Sheep pulmonary adenomatosis virus (Jaagsiekte sheep retrovirus)"},"name":"Gag-Pro-Pol polyprotein","description":["Capsid protein","Catalyzes viral DNA integration into the host chromosome, by performing a series of DNA cutting and joining reactions","Enhances the activity of the reverse transcriptase. May be part of the mature RT","Matrix protein","Nucleocapsid protein p14: Nucleocapsid protein"],"length":1729,"sequence":"MGQTHSRQLFVHMLSVMLKHRGITVSKPKLINFLSFIEEVCPWFPREGTVNLETWKKVGEQIRTHYTLHGPEKVPVETLSFWTLIRDCLDFDNDELKRLGNLLKQEEDPLHTPGSEPSYDPPPPPPPSLKMHPSDNDDLLSSTDEAELDEEAAKYHQEDWGFLAQEKGALTSKDELVECFKNLTIALQNAGISLPHNNTFPSAPPFPPAYTPSVMAGLDPPPGFPPPSKHMSPLQRALRQAQRLGEVVSDFSLAFPVFENNNQRYYESLPFKQLKELKIACSQYGPTAPFTIAMIENLGTQALPPNDWKQTARACLSGGDYLLWKSEFFEQCARIADVNRQQGIQTSYEMLIGEGPYQATDTQLNFLPGAYAQISNAARQAWKRLPSSSTKTEDLSKVRQGPDEPYQDFVARLLDTIGKIMSDEKAEMVLAKQLAFENANSACQAALRPYRKKGDLSDFIRICADIGPSYMQGIAMAAALQGKSIKEVLFQQQARNKKGLQKSGNSGCFVCGQPGHRAAVCPQKQQSPVNTPNLCPRCKKGKHWARDCRSKTDVQGNSFAPGFGKLGEGPAPGPETMLWGNTAGSKRTIADLCRATRGSAGLDLCATSYTVLTPEMGVQTLATGVFGPLPPGTAGLLLGRSSASLKGILIHPGVIDSDYTGEIKILASAPNKIIVINAGQRIAQLLLVPLVIQGKTINRDRQDKGFGSSDAYWVQNVTEARPELELRINGKLFRGVLDTGADISVISDKYWPTTWPKQMAISTLQGIGQTTNPEQSSSLLTWKDKDGHTGQFKPYILPYLPVNLWGRDILSKMGVYLYSPSPTVTDLMLDQGLLPNQGLGKQHQGIILPLDLKSNSRSKRLGVFSLGTSDSPVTHADPIDWKSEEPVWVDQWPLTQEKLSAAQQLVQEQLRLGHIEPSTSAWNSPIFVIKKKSGKWRLLQDLRKVNETMMHMGALQPGLPTPSAIPDKSYIIVIDLKDCFYTIPLAPQDCKRFAFSLPSVNFKEPMQRYQWRVLPQGMTNSPTLCQKFVATAIAPVRQRFPQLYLVHYMDDILLAHADEHLLYQAFSILKQHLSLNGLVIADEKIQTHFPYNYLGFSLYPRVYNTQLVKLQTDHLKTLNDFQKLLGDINWIRPYLKLPTYTLQPLFDILKGDSDPASPRTLSLEGRTALQSIEEAIRQQQITYCDYQRSWGLYILPTPRAPTGVLYQDKPLRWIYLSATPTKHLLPYYELVAKIVAKGRHEAIQYFGMEPPFICVPYALEQQDWLFQFSDNWSIAFANYPGQITHHYPSDKLLQFASSHAFIFPKVVRRQPIPEATLIFTDGSSNGTAALIINHQTYYAQTSFSSAQVVELFAVHQALLTVPTSFNLFTDSSYVVGALQMIETVPIIGTTSPEVLNLFTLIQQVLHCRQHPCFFGHIRAHSTLPGALVQGNHTADVLTKQVFFQSAIDAARKSHDLHHQNSHSLRLQFKISREAARQIVKSCSTCPQFFVLPQYGVNPRGLRPNHLWQTDVTHIPQFGRLKYVHVSIDTFSNFLMASLHTGESTRHCIQHLLFCFSTSGIPQTLKTDNGPGYTSRSFQRFCLSFQIHHKTGIPYNPQGQGIVERAHQRLKHQLLKQKKGNELYSPSPHNALNHALYVLNFLTLDAEGNSAAQRFWGERSSCKKPLVRWKDPLTNLWYGPDPVLIWGRGHVCVFPQDAEAPRWIPERLVRAAEELPDTSNATHDTERAHE","proteome":null,"gene":"gag-pro-pol","go_terms":[{"identifier":"GO:0016032","name":"viral process","category":{"code":"P","name":"biological_process"}},{"identifier":"GO:0003676","name":"nucleic acid binding","category":{"code":"F","name":"molecular_function"}},{"identifier":"GO:0008270","name":"zinc ion binding","category":{"code":"F","name":"molecular_function"}},{"identifier":"GO:0004190","name":"aspartic-type endopeptidase activity","category":{"code":"F","name":"molecular_function"}},{"identifier":"GO:0006508","name":"proteolysis","category":{"code":"P","name":"biological_process"}},{"identifier":"GO:0003964","name":"RNA-directed DNA polymerase activity","category":{"code":"F","name":"molecular_function"}},{"identifier":"GO:0006278","name":"RNA-templated DNA biosynthetic process","category":{"code":"P","name":"biological_process"}},{"identifier":"GO:0004523","name":"RNA-DNA hybrid ribonuclease activity","category":{"code":"F","name":"molecular_function"}},{"identifier":"GO:0015074","name":"DNA integration","category":{"code":"P","name":"biological_process"}},{"identifier":"GO:0005198","name":"structural molecule activity","category":{"code":"F","name":"molecular_function"}}],"protein_evidence":4,"source_database":"unreviewed","is_fragment":false,"in_alphafold":false,"in_bfvd":false,"ida_accession":"d05b6ce10ae0f9c22b9c736f941b761f8ab17292","counters":{"domain_architectures":3,"entries":82,"isoforms":0,"proteomes":0,"sets":14,"structures":0,"taxa":1,"dbEntries":{"ssf":10,"cathgene3d":11,"pfam":15,"smart":2,"profile":8,"cdd":4,"panther":1,"prosite":1,"interpro":30},"proteome":0,"taxonomy":1,"similar_proteins":3}}}