Genome polyprotein (Q6YMS4)

Accession
Q6YMS4 (POLG_DEN3S)
Species
Dengue virus type 3 (strain Sri Lanka/1266/2000) (DENV-3)
Length
3,390 amino acids (complete)
Source: UniProtKB


Protein family membership

Homologous superfamilies

  1. Homologous superfamily
  2. Homologous superfamily
  3. Homologous superfamily
1 500 1000 1500 2000 2500 3000 3390

Domains and repeats

1 500 1000 1500 2000 2500 3000 3390

Detailed signature matches

    1. PIRSF003817 (Gen_Po...)
    1. PF01003 (Flavi_capsid)
    1. PF01570 (Flavi_propep)
    1. PF01004 (Flavi_M)
    1. PF00869 (Flavi_glyc...)
    1. cd12149 (Flavi_E_C)
    2. PF02832 (Flavi_glyc...)
    1. TIGR04240 (flavi_E_...)
    1. PF00948 (Flavi_NS1)
    1. PF01005 (Flavi_NS2A)
    1. PF01002 (Flavi_NS2B)
    2. PS51527 (FLAVIVIRUS...)
    1. PF00949 (Peptidase_S7)
    2. PS51528 (FLAVIVIRUS...)
    1. SM00487 (DEXDc)
    2. PS51192 (HELICASE_A...)
    1. PF07652 (Flavi_DEAD)
    1. SM00490 (HELICc)
    2. PS51194 (HELICASE_CTER)
    1. PF01350 (Flavi_NS4A)
    1. PF01349 (Flavi_NS4B)
    1. PS51591 (RNA_CAP01_...)
    1. PF00972 (Flavi_NS5)
    1. PS50507 (RDRP_SSRNA...)

Other features

Residue annotation

  1. homodimer interfac...
  2. low pH domain inte...
  3. low pH trimer inte...
  4. ATP binding site c...
  5. putative Mg++ bind...

GO term prediction

Biological Process

GO:0016032 viral process
GO:0016070 RNA metabolic process
GO:0019058 viral life cycle
GO:0032259 methylation
GO:0039694 viral RNA genome replication

Molecular Function

GO:0003723 RNA binding
GO:0003724 RNA helicase activity
GO:0003725 double-stranded RNA binding
GO:0003968 RNA-directed 5'-3' RNA polymerase activity
GO:0004252 serine-type endopeptidase activity
GO:0004482 mRNA (guanine-N7-)-methyltransferase activity
GO:0004483 mRNA (nucleoside-2'-O-)-methyltransferase activity
GO:0005198 structural molecule activity
GO:0005524 ATP binding
GO:0008026 ATP-dependent helicase activity
GO:0008168 methyltransferase activity
GO:0016817 hydrolase activity, acting on acid anhydrides
GO:0017111 nucleoside-triphosphatase activity
GO:0046983 protein dimerization activity

Cellular Component

GO:0019012 virion
GO:0019028 viral capsid
GO:0019031 viral envelope