{"metadata":{"accession":"S0DLP1","id":"APF6_GIBF5","source_organism":{"taxId":"1279085","scientificName":"Gibberella fujikuroi (strain CBS 195.34 / IMI 58289 / NRRL A-6831)","fullName":"Gibberella fujikuroi (strain CBS 195.34 / IMI 58289 / NRRL A-6831) (Bakanae and foot rot disease fungus)"},"name":"O-methyltransferase apf6","description":["O-methyltransferase; part of the gene cluster that mediates the biosynthesis of the cyclic tetrapeptide apicidin F (APF) (PubMed:25058475). The non-ribosomal peptide synthetase apf1 incorporates four different amino acids to produce apicidin F: L-phenylalanine, D-pipecolic acid (D-pip), N-methoxy-L-tryptophan and L-2-aminooctanedioic acid (PubMed:25058475). L-Phenylalanine is the only proteinogenic amino acid directly used by apf1 (PubMed:24195442, PubMed:25058475). The 3 other apf1 substrates are non-proteinogenic and have to be modified by other enzymes of the cluster (PubMed:25058475). Lysine is converted to delta-1-pyrroline-5-carboxylate (P5C) which is reduced to L-pipecolic acid (L-pip) by apf3 (PubMed:25058475). L-pip is epimerized to D-pip, probably by apf1 activity, prior to incorporation (PubMed:25058475). L-Tryptophan is N-oxidyzed by one of the cytochrome P450 monooxygenases (apf7 or apf8), and further methylated at the hydroxy group by the O-methyltransferase apf6 to yield N-methoxy-L-tryptophan (PubMed:25058475). The synthesis of the fourth apf1 substrate is more complex (PubMed:25058475). The fatty acid synthase apf5 is involved in the synthesis of the octanoic acid backbone of L-2-aminooctanedioic acid by fixing one acetyl-CoA unit and three malonyl-CoA units (PubMed:25058475). Then one of the cytochrome P450 monooxygenases (apf7 or apf8) may oxidize this backbone to 2-oxooctanoic acid (PubMed:25058475). The aminotransferase apf4 is predicted to catalyze the exchange of the keto group with an amino group (PubMed:25058475). The next step would be the oxidation of 2-aminooctanoic acid by one of the cytochrome P450 monooxygenases (apf7 or apf8). The last step is the oxidation of 2-amino-8-hydroxyoctanoic acid to 2-aminooctanedioic acid is catalyzed by the FAD-dependent monooxygenase apf9 (PubMed:25058475)"],"length":351,"sequence":"MASPSTDRLHLIEYLQDPGNPDGESRERLIEACQDVIASLERPIETARKQAFLTLDHAVIRSAIKLNLFKALDKEDRPYSTQELALATTPQCNHVLLSRLLRYLATRPLRLVIETSAGFWQRTARGSVFAQDSFKSGCSMYFDACGPAFQALPTWICTPDHERLHSPFQVAYPGQGSFFKRLQEDDSMLQTFQCWMETVSRHQFCAQETIDFNEWIPDGTSDSDVVFVDVGGGTGDQAIALGYKRIGLPGRIINQDLLPISQEAEEMLRSHNIERITYNFFDEQPLKGACVYHYRQIFHDWPDADCERILRRAKDSMTASSTLLIDEVVLPETGAHWMNDHKYNGVACYST","proteome":"UP000016800","gene":"apf6","go_terms":[{"identifier":"GO:0008168","name":"methyltransferase activity","category":{"code":"F","name":"molecular_function"}},{"identifier":"GO:0046983","name":"protein dimerization activity","category":{"code":"F","name":"molecular_function"}},{"identifier":"GO:0008171","name":"O-methyltransferase activity","category":{"code":"F","name":"molecular_function"}}],"protein_evidence":1,"source_database":"reviewed","is_fragment":false,"in_alphafold":true,"in_bfvd":false,"ida_accession":"bdc835ccb83003619dd55371e507d9b3256eafa8","counters":{"domain_architectures":30676,"entries":15,"isoforms":0,"proteomes":1,"sets":2,"structures":0,"taxa":1,"dbEntries":{"ssf":2,"cathgene3d":2,"profile":1,"pfam":2,"panther":1,"pirsf":1,"interpro":6},"proteome":1,"taxonomy":1,"similar_proteins":30676}}}