{"metadata":{"accession":"Q8B8X3","id":"POL1_TBRVM","source_organism":{"taxId":"283677","scientificName":"Tomato black ring virus (strain MJ)","fullName":"Tomato black ring virus (strain MJ) (TBRV)"},"name":"RNA1 polyprotein","description":["Picornain 3C-like protease is a thiol protease that cleaves the P1 and P2 polyproteins"],"length":2266,"sequence":"MSVTLSPPGDCFTFNHVKYNNSLNKYLFYNNNLDIVLDDFDFYFNFYAKKYNVLSSFFSDRVLSALYTPMSVSEAASLALEDFCELALDKLKINPFHQLWEETLANWPVYPGTSLLDFFRTQYEIRREVAEASAEALRLKKATRADAFADEVKFLIKNGVLPHLAGDFARKIWSTGKDQKKTRTAFLVKIKKANQLKQQWNSARSLAAARAEVLREFEPSPQQIQKAIEAQLFAEKLGRKYATLTARVRAKRAAARELREKQLYQETVDLLNASLLPPMEKVEIERKYRKVRPTGANVVHQVVANPLGSLCPYMGLGAKTADVRCQATLMAGKIHAQYPRLATAIYAWVIGPAAHFECITPVRNFVKGLTFMVDFFPEEALIHELNEITTEAVCIGASMVLDEERAKLEAHAQSANCRANVFMKAMAGVKNMAKCAYTGFKTGCEEAGRSLAEGICSVMMRSFRECIAQIKTELGCAIEMVEVMIKKVKDWFYSMLEKLQCGLETLGSYAMYALAILLGCGLTSLLERCIGGQGILTKLFITGVLAAIGLQAAGGFDNLQREMVQLCTALAAGIFDIQHAGNGKYKPSWDITAEHAREDARDSNVRSIPIISGVIEALAQFGTGLCSMQSATLIEIGKIGAACHSMRMGKEALKEFCATLMYYLGRIADKVTGRETIFFDELSTLVHVDVRGWIKRAQSCMRESFHTEIGNQFFRDMVAQLVDEGQKLQIGVNGIPRKISADYSQLIGQIMKDLVELHKRTIRAGISEGRRCEPVWIYLFGQRHCGKSNFMSTLDNALAKHFNLPNTTAYRNCKDAFYSGYSGQTFFHMDDLSSVKLEPPLEAELINLVSCQEVPLNMADLADKPIYFRSPFIISSSNFEDVPAGCGVRDIEAYRARKACLVEMRRKPGVIYDPENPLLASQARFKDPMYQTLINGQTEETSWMEMDDVVTEIINISARHRSAQEKLQARYMREKALLDPLALASESFLVKEAQKVFLDFDGVELEKAGVPRPEGGHGLYVDGVLYLVNASFEFDEIPIKDGGYQRLWDSRMRKKFLPAIQRDEHLNTKSMVVTGFLRSLVNGECAVLSKDTLTASATTAQLSIFKALRLEERVYLRTLQHQLDLYSQDIPENPYCNSAWVKVLGAIGAGRDYLVQNGCGILMIAAALILILVSGWGFWKLFVGLFSGTMSLGAAITGMSAVDIKAQQSSASQEKGYRARNIPIHHRYAYARSQAGDGLLPAARLCVAIYQPGGGFVSAMQYKNKSVRMTRHQALRFKEGEQLTVIFASTGESQLIRWHKYHMREEHGSEIVTWLAPSLPALSPDLKDLFLEDKEVDLPNHFKTIGYVLRVDSTAFHYDTLDTYGAVDKTPLPLKGVVGNELYLHEIPEKIVFHYESRNDDCGMIMLCQIRGKMRVVGMLVAGKDKTSWADIMPPNSLAELKSQIDYIPEFGEACDGYFKAGYVHKSEAPTLPKKTNMVPVPESLRVPCDVPVKEPAVLTKDDPRCPIGVDPPRAALKKKFTQPMMELEQEILDEVATDILETWYDCEDHVLSDISLSVAINGIPADSEEAELENFVMKTSPGYPYFKNNRAEKLKGKHAYFEEAEDGSLQLKKGGMAAELHENLVEFTKNEVPELVVIECTKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQHNRHRLPCQVGTNPYSREWGHMLNRLMRPKTNEAINCDYSGFDGLLNPQLIECIARMINRLYALSGESDVQQAQRYNMLMALVGRYAFVGQQVYKVNCGLPSGFALTVVVNSVFNEILIRYAYKKLAPAPERNRFGSTVCLLVYGDDNLISVSPSIASWFTGEAIRITLAEKKVKITDGSDKDAPTIEAKSFWELDFLKRKFLKLDNGIVQAPLDRSAIFSSLYWLTPDKSKFHESQKPSDFQGEVDVIEELLLNVNVALMELYLHNDVAEFQRVRGFYAQRLPLMVSQLRTWAFCEAFHSAQQTGMQKYDPAVVLDHMSGVDFKRFMHMSEQGNKAHFYTEMLGVSGPHYKPQEGDFIVSNQPLKPGVQGEYVPIVFGEGIGGLPTKKWVGDFGKPSQLKNSKGYLITGLLREQIEAGKRLIFMGPAPYVANNAALISFGSAHKMLIQKDALAHYRNVIPESTSGLEQYFDAPIPQASVGTFYFGDGETYTALCEYKDGKVLQYEGLPTAILNQAAKDRKVPCMVARQWKSKFTVRMACDSNMCPHHSATCANFELAFKQCWLSKCKCAGNNVSKWYGTKFS","proteome":"UP000201135","gene":null,"go_terms":[{"identifier":"GO:0003723","name":"RNA binding","category":{"code":"F","name":"molecular_function"}},{"identifier":"GO:0003724","name":"RNA helicase activity","category":{"code":"F","name":"molecular_function"}},{"identifier":"GO:0004197","name":"cysteine-type endopeptidase activity","category":{"code":"F","name":"molecular_function"}},{"identifier":"GO:0003968","name":"RNA-directed RNA polymerase activity","category":{"code":"F","name":"molecular_function"}},{"identifier":"GO:0039694","name":"viral RNA genome replication","category":{"code":"P","name":"biological_process"}},{"identifier":"GO:0006351","name":"DNA-templated transcription","category":{"code":"P","name":"biological_process"}}],"protein_evidence":3,"source_database":"reviewed","is_fragment":false,"in_alphafold":false,"in_bfvd":false,"ida_accession":"f7a4f0478c11e7e1470e4f927793d208972718c9","counters":{"domain_architectures":1140,"entries":15,"isoforms":0,"proteomes":1,"sets":2,"structures":0,"taxa":1,"dbEntries":{"profile":3,"pfam":2,"ssf":1,"cathgene3d":2,"interpro":7},"proteome":1,"taxonomy":1,"similar_proteins":1140}}}