{"metadata":{"accession":"PF17384","entry_id":null,"type":"domain","go_terms":null,"source_database":"pfam","member_databases":null,"integrated":"IPR028998","hierarchy":null,"name":{"name":"RimP C-terminal Sm-like domain","short":"RimP_C"},"description":[{"text":"<p>This family represents the C-terminal domain from the bacterial ribosome assembly factor RimP. In Gram-negative bacteria, RimP knockout causes slow cell growth whereas in Gram-positive Streptococcus pneumoniae, the deletion of RimP is lethal. RimP is essential for survival under stress conditions in Mycobacterium. RimP is seen in four ribosome assembly states (states A to D) bound on the front of the 30S subunit [[cite:PUB00164403]]. RimP contains two domains, an N-terminal and a C-terminal domain having a Sm-like fold, characteristic of the Sm/Lsm superfamily proteins, connected by an unstructured region [[cite:PUB00021814],[cite:PUB00164403]].</p>","llm":false,"checked":false,"updated":false}],"wikipedia":null,"literature":{"PUB00021814":{"PMID":11493012,"ISBN":null,"volume":"311","issue":"3","year":2001,"title":"Solution structure and function of a conserved protein SP14.3 encoded by an essential Streptococcus pneumoniae gene.","URL":null,"raw_pages":"593-604","medline_journal":"J Mol Biol","ISO_journal":"J. Mol. Biol.","authors":["Yu L","Gunasekera AH","Mack J","Olejniczak ET","Chovan LE","Ruan X","Towne DL","Lerner CG","Fesik SW."],"DOI_URL":"http://dx.doi.org/10.1006/jmbi.2001.4894"},"PUB00164403":{"PMID":34088665,"ISBN":null,"volume":"7","issue":"23","year":2021,"title":"A conserved rRNA switch is central to decoding site maturation on the small ribosomal subunit.","URL":null,"raw_pages":"eabf7547","medline_journal":"Sci Adv","ISO_journal":"Sci Adv","authors":["Schedlbauer A","Iturrioz I","Ochoa-Lizarralde B","Diercks T","Lopez-Alonso JP","Lavin JL","Kaminishi T","Capuni R","Dhimole N","de Astigarraga E","Gil-Carton D","Fucini P","Connell SR."],"DOI_URL":"https://doi.org/10.1126/sciadv.abf7547"}},"set_info":{"accession":"CL0986","name":"Sm-like"},"overlaps_with":null,"counters":{"subfamilies":0,"domain_architectures":5,"interactions":0,"matches":14689,"pathways":0,"proteins":14671,"proteomes":14368,"sets":1,"structural_models":{"alphafold":9640},"structures":13,"taxa":20554},"entry_annotations":{"hmm":0,"logo":0,"alignment:seed":26,"alignment:full":7220},"cross_references":{},"is_llm":false,"is_reviewed_llm":false,"is_updated_llm":false,"representative_structure":null}}