{"metadata":{"accession":"PF11645","entry_id":null,"type":"domain","go_terms":null,"source_database":"pfam","member_databases":null,"integrated":"IPR021671","hierarchy":null,"name":{"name":"PD-(D/E)XK endonuclease","short":"PDDEXK_5"},"description":[{"text":"<p>This family of endonucleases includes a group I intron-encoded endonuclease [[cite:PUB00066698]]. This family belongs to the PD-(D/E)XK superfamily [[cite:PUB00042270],[cite:PUB00066699]].</p>","llm":false,"checked":false,"updated":false}],"wikipedia":null,"literature":{"PUB00066699":{"PMID":22638584,"ISBN":null,"volume":"40","issue":"15","year":2012,"title":"Sequence, structure and functional diversity of PD-(D/E)XK phosphodiesterase superfamily.","URL":null,"raw_pages":"7016-45","medline_journal":"Nucleic Acids Res","ISO_journal":"Nucleic Acids Res.","authors":["Steczkiewicz K","Muszewska A","Knizewski L","Rychlewski L","Ginalski K."],"DOI_URL":"http://dx.doi.org/10.1093/nar/gks382"},"PUB00066698":{"PMID":11251845,"ISBN":null,"volume":"39","issue":"5","year":2001,"title":"A novel group I intron-encoded endonuclease specific for the anticodon region of tRNA(fMet) genes.","URL":null,"raw_pages":"1299-306","medline_journal":"Mol Microbiol","ISO_journal":"Mol. Microbiol.","authors":["Bonocora RP","Shub DA."],"DOI_URL":"http://dx.doi.org/10.1111/j.1365-2958.2001.02318.x"},"PUB00042270":{"PMID":17410205,"ISBN":null,"volume":"26","issue":"9","year":2007,"title":"The restriction fold turns to the dark side: a bacterial homing endonuclease with a PD-(D/E)-XK motif.","URL":null,"raw_pages":"2432-42","medline_journal":"EMBO J","ISO_journal":"EMBO J.","authors":["Zhao L","Bonocora RP","Shub DA","Stoddard BL."],"DOI_URL":"http://dx.doi.org/10.1038/sj.emboj.7601672"}},"set_info":{"accession":"CL0236","name":"PDDEXK"},"overlaps_with":null,"counters":{"subfamilies":0,"domain_architectures":2,"interactions":0,"matches":503,"pathways":0,"proteins":492,"proteomes":430,"sets":1,"structural_models":{"alphafold":338},"structures":1,"taxa":1032},"entry_annotations":{"hmm":0,"logo":0,"alignment:seed":14,"alignment:full":246},"cross_references":{},"is_llm":false,"is_reviewed_llm":false,"is_updated_llm":false,"representative_structure":null}}