{"metadata":{"accession":"PF04307","entry_id":null,"type":"domain","go_terms":null,"source_database":"pfam","member_databases":null,"integrated":"IPR007404","hierarchy":null,"name":{"name":"YdjM inner membrane protein","short":"YdjM"},"description":[{"text":"<p>YdjM is a family of putative LexA-binding proteins. Members are predicted to be membrane-bound metal-dependent hydrolases that may be acting as phospholipases. It is a member of the SOS network, that rescues cells from UV and other DNA-damage. Expression of YdjM is regulated by LexA [[cite:PUB00075708],[cite:PUB00155923]].</p>","llm":false,"checked":false,"updated":false}],"wikipedia":null,"literature":{"PUB00075708":{"PMID":22958895,"ISBN":null,"volume":"12","issue":null,"year":2012,"title":"A phylogenomic analysis of Escherichia coli / Shigella group: implications of genomic features associated with pathogenicity and ecological adaptation.","URL":null,"raw_pages":"174","medline_journal":"BMC Evol Biol","ISO_journal":"BMC Evol. Biol.","authors":["Zhang Y","Lin K."],"DOI_URL":"http://dx.doi.org/10.1186/1471-2148-12-174"},"PUB00155923":{"PMID":10760155,"ISBN":null,"volume":"35","issue":"6","year":2000,"title":"Identification of additional genes belonging to the LexA regulon in Escherichia coli.","URL":null,"raw_pages":"1560-72","medline_journal":"Mol Microbiol","ISO_journal":"Mol Microbiol","authors":["Fernandez De Henestrosa AR","Ogi T","Aoyagi S","Chafin D","Hayes JJ","Ohmori H","Woodgate R."],"DOI_URL":"https://doi.org/10.1046/j.1365-2958.2000.01826.x"}},"set_info":{"accession":"CL0368","name":"PhosC-NucP1"},"overlaps_with":null,"counters":{"subfamilies":0,"domain_architectures":23,"interactions":0,"matches":15208,"pathways":0,"proteins":14526,"proteomes":9176,"sets":1,"structural_models":{"alphafold":9793},"structures":0,"taxa":13475},"entry_annotations":{"hmm":0,"logo":0,"alignment:seed":83,"alignment:full":6966},"cross_references":{},"is_llm":false,"is_reviewed_llm":false,"is_updated_llm":false,"representative_structure":null}}