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{
"metadata": {
"accession": "cd22349",
"entry_id": null,
"type": "domain",
"go_terms": null,
"source_database": "cdd",
"member_databases": null,
"integrated": null,
"hierarchy": null,
"name": {
"name": "Endonuclease domain of segmented negative-strand RNA virus (sNSV) polymerases",
"short": "PDDEXK_RNA_polymerase-like"
},
"description": [
{
"text": "<p>The N-terminal endonuclease domain of sNSV polymerases is essential for viral cap-dependent transcription; it has endonuclease activity and belongs to a superfamily of PDDEXK nucleases including very short patch repair (Vsr) endonucleases, archaeal Holliday junction resolvases, MutH methyl-directed DNA mismatch-repair endonucleases, and catalytic domains of many restriction endonucleases, such as EcoRI, BamHI, and FokI. [[cite:PUB00147263], [cite:PUB00054476]]</p>",
"llm": false,
"checked": false,
"updated": false
}
],
"wikipedia": null,
"literature": {
"PUB00054476": {
"PMID": 20862319,
"ISBN": null,
"volume": "6",
"issue": "9",
"year": 2010,
"title": "Bunyaviridae RNA polymerases (L-protein) have an N-terminal, influenza-like endonuclease domain, essential for viral cap-dependent transcription.",
"URL": null,
"raw_pages": null,
"medline_journal": "PLoS Pathog",
"ISO_journal": "PLoS Pathog.",
"authors": [
"Reguera J",
"Weber F",
"Cusack S."
],
"DOI_URL": null
},
"PUB00147263": {
"PMID": 26004069,
"ISBN": null,
"volume": "161",
"issue": "6",
"year": 2015,
"title": "Structural Insights into Bunyavirus Replication and Its Regulation by the vRNA Promoter.",
"URL": null,
"raw_pages": "1267-79",
"medline_journal": "Cell",
"ISO_journal": "Cell",
"authors": [
"Gerlach P",
"Malet H",
"Cusack S",
"Reguera J."
],
"DOI_URL": null
}
},
"set_info": {
"accession": "cl40440",
"name": "PDDEXK_nuclease-like"
},
"overlaps_with": null,
"counters": {
"subfamilies": 0,
"domain_architectures": 0,
"interactions": 0,
"matches": 584,
"pathways": 0,
"proteins": 584,
"proteomes": 116,
"sets": 1,
"structural_models": {
"alphafold": 0,
"bfvd": 1
},
"structures": 31,
"taxa": 301
},
"entry_annotations": {},
"cross_references": {},
"is_llm": false,
"is_reviewed_llm": false,
"is_updated_llm": false,
"representative_structure": {
"accession": "7ex9",
"name": "Crystal structure of Ebinur Lake virus cap snatching endonuclease in complex with inhibitor 28"
}
}
}