{"metadata":{"accession":"IPR026336","entry_id":null,"type":"family","go_terms":null,"source_database":"interpro","member_databases":{"ncbifam":{"TIGR04123":"ligase-associated DNA damage response endonuclease PdeM"}},"integrated":null,"hierarchy":{"accession":"IPR024173","name":"Phosphoesterase MJ0037-like","type":"Family","children":[{"accession":"IPR004376","name":"Phosphoesterase MJ0037","type":"Family","children":[]},{"accession":"IPR026336","name":"Ligase-associated DNA damage response endonuclease PdeM-like","type":"Family","children":[]}]},"name":{"name":"Ligase-associated DNA damage response endonuclease PdeM-like","short":"PdeM-like"},"description":[{"text":"<p>This entry represents putative DNA ligase-associated phosphodiesterases, including Ligase-associated DNA damage response endonuclease PdeM from the proteobacteria Derxia gummosa, a class III phosphodiesterase [[cite:PUB00106816]].</p>","llm":false,"checked":false,"updated":false}],"wikipedia":null,"literature":{"PUB00106816":{"PMID":25658120,"ISBN":null,"volume":"10","issue":"2","year":2015,"title":"Identification and characterization of a novel phosphodiesterase from the metagenome of an Indian coalbed.","URL":null,"raw_pages":"e0118075","medline_journal":"PLoS One","ISO_journal":"PLoS One","authors":["Singh DN","Gupta A","Singh VS","Mishra R","Kateriya S","Tripathi AK."],"DOI_URL":null}},"set_info":null,"overlaps_with":[{"accession":"IPR029052","name":"Metallo-dependent phosphatase-like","type":"homologous_superfamily"}],"counters":{"subfamilies":0,"domain_architectures":0,"interactions":0,"matches":5075,"pathways":0,"proteins":5075,"proteomes":3968,"sets":0,"structural_models":{"alphafold":3662,"bfvd":0},"structures":2,"taxa":5825},"entry_annotations":{},"cross_references":{"gp":{"displayName":"Genome Properties","description":"Genome properties is an annotation system whereby functional attributes can be assigned to a genome, based on the presence of a defined set of protein signatures within that genome.","rank":45,"accessions":[{"accession":"GenProp0977","url":"https://www.ebi.ac.uk/interpro/genomeproperties/genome-property/GenProp0977"}]}},"is_llm":false,"is_reviewed_llm":false,"is_updated_llm":false,"representative_structure":{"accession":"6nvp","name":"Crystal structure of Pseudomonas putida nuclease MPE"}}}