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InterPro-Version: 108.0
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{
"metadata": {
"accession": "IPR009956",
"entry_id": null,
"type": "family",
"go_terms": null,
"source_database": "interpro",
"member_databases": {
"pfam": {
"PF07362": "Post-segregation antitoxin CcdA"
}
},
"integrated": null,
"hierarchy": {
"accession": "IPR009956",
"name": "Post-segregation antitoxin CcdA",
"type": "Family",
"children": []
},
"name": {
"name": "Post-segregation antitoxin CcdA",
"short": "Post-segregation_anti-tox_CcdA"
},
"description": [
{
"text": "<p>This entry consists of several Enterobacterial post-segregation antitoxin CcdA proteins. The F plasmid-carried bacterial toxin, the CcdB protein, is known to act on DNA gyrase in two different ways. CcdB poisons the gyrase-DNA complex, blocking the passage of polymerases and leading to double-strand breakage of the DNA. Alternatively, in cells that overexpress CcdB, the A subunit of DNA gyrase (GyrA) has been found as an inactive complex with CcdB. Both poisoning and inactivation can be prevented and reversed in the presence of the F plasmid-encoded antidote, the CcdA protein [[cite:PUB00013116]].</p>",
"llm": false,
"checked": false,
"updated": false
}
],
"wikipedia": null,
"literature": {
"PUB00013116": {
"PMID": 10196173,
"ISBN": null,
"volume": "274",
"issue": "16",
"year": 1999,
"title": "Interactions of CcdB with DNA gyrase. Inactivation of Gyra, poisoning of the gyrase-DNA complex, and the antidote action of CcdA.",
"URL": null,
"raw_pages": "10936-44",
"medline_journal": "J Biol Chem",
"ISO_journal": "J. Biol. Chem.",
"authors": [
"Bahassi EM",
"O'Dea MH",
"Allali N",
"Messens J",
"Gellert M",
"Couturier M."
],
"DOI_URL": "http://dx.doi.org/10.1074/jbc.274.16.10936"
}
},
"set_info": null,
"overlaps_with": null,
"counters": {
"subfamilies": 0,
"domain_architectures": 15,
"interactions": 0,
"matches": 3384,
"pathways": 0,
"proteins": 3384,
"proteomes": 1698,
"sets": 0,
"structural_models": {
"alphafold": 2691,
"bfvd": 0
},
"structures": 7,
"taxa": 3580
},
"entry_annotations": {
"alignment:seed": 39,
"alignment:full": 942
},
"cross_references": {
"gp": {
"displayName": "Genome Properties",
"description": "Genome properties is an annotation system whereby functional attributes can be assigned to a genome, based on the presence of a defined set of protein signatures within that genome.",
"rank": 45,
"accessions": [
{
"accession": "GenProp0321",
"url": "https://www.ebi.ac.uk/interpro/genomeproperties/genome-property/GenProp0321"
}
]
}
},
"is_llm": false,
"is_reviewed_llm": false,
"is_updated_llm": false,
"representative_structure": {
"accession": "3hpw",
"name": "CcdB dimer in complex with one C-terminal CcdA domain"
}
}
}