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{
"metadata": {
"accession": "IPR005869",
"entry_id": null,
"type": "family",
"go_terms": [
{
"identifier": "GO:0016168",
"name": "chlorophyll binding",
"category": {
"code": "F",
"name": "molecular_function"
}
},
{
"identifier": "GO:0009772",
"name": "photosynthetic electron transport in photosystem II",
"category": {
"code": "P",
"name": "biological_process"
}
},
{
"identifier": "GO:0015979",
"name": "photosynthesis",
"category": {
"code": "P",
"name": "biological_process"
}
},
{
"identifier": "GO:0009523",
"name": "photosystem II",
"category": {
"code": "C",
"name": "cellular_component"
}
},
{
"identifier": "GO:0016020",
"name": "membrane",
"category": {
"code": "C",
"name": "cellular_component"
}
}
],
"source_database": "interpro",
"member_databases": {
"hamap": {
"MF_01496": "Photosystem II CP43 reaction center protein [psbC]"
},
"ncbifam": {
"TIGR01153": "photosystem II reaction center protein CP43"
}
},
"integrated": null,
"hierarchy": {
"accession": "IPR000932",
"name": "Photosystem antenna protein-like",
"type": "Family",
"children": [
{
"accession": "IPR005869",
"name": "Photosystem II CP43 reaction centre protein",
"type": "Family",
"children": []
},
{
"accession": "IPR017486",
"name": "Photosystem II CP47 reaction centre protein",
"type": "Family",
"children": []
}
]
},
"name": {
"name": "Photosystem II CP43 reaction centre protein",
"short": "PSII_PsbC"
},
"description": [
{
"text": "<p>This family represents the intrinsic antenna protein CP43 (PsbC), which is one of two such proteins found in the reaction centre of PSII, both of which can bind to chlorophyll 'a' and beta-carotene, passing the excitation energy on to the reaction centre [[cite:PUB00015360]].</p>",
"llm": false,
"checked": false,
"updated": false
},
{
"text": "<p>Oxygenic photosynthesis uses two multi-subunit photosystems (I and II) located in the cell membranes of cyanobacteria and in the thylakoid membranes of chloroplasts in plants and algae. Photosystem II (PSII) has a P680 reaction centre containing chlorophyll 'a' that uses light energy to carry out the oxidation (splitting) of water molecules, and to produce ATP via a proton pump. Photosystem I (PSI) has a P700 reaction centre containing chlorophyll that takes the electron and associated hydrogen donated from PSII to reduce NADP+ to NADPH. Both ATP and NADPH are subsequently used in the light-independent reactions to convert carbon dioxide to glucose using the hydrogen atom extracted from water by PSII, releasing oxygen as a by-product [[cite:PUB00152828]].</p>",
"llm": false,
"checked": false,
"updated": false
},
{
"text": "<p>PSII is a multisubunit protein-pigment complex containing polypeptides both intrinsic and extrinsic to the photosynthetic membrane [[cite:PUB00152828], [cite:PUB00015357], [cite:PUB00015358], [cite:PUB00097583]]. Within the core of the complex, the chlorophyll and β-carotene pigments are mainly bound to the antenna proteins CP43 (PsbC) and CP47 (PsbB), which pass the excitation energy on to the reaction centre proteins D1 (Qb, PsbA) and D2 (Qa, PsbD) that bind all the redox-active cofactors involved in the energy conversion process. The PSII oxygen-evolving complex (OEC) oxidises water to provide protons for use by PSI, and consists of OEE1 (PsbO), OEE2 (PsbP) and OEE3 (PsbQ). The remaining subunits in PSII are of low molecular weight (less than 10kDa), and are involved in PSII assembly, stabilisation, dimerisation, and photo-protection [[cite:PUB00015359]].</p>",
"llm": false,
"checked": false,
"updated": false
}
],
"wikipedia": null,
"literature": {
"PUB00015357": {
"PMID": 12518057,
"ISBN": null,
"volume": "100",
"issue": "1",
"year": 2003,
"title": "Crystal structure of oxygen-evolving photosystem II from Thermosynechococcus vulcanus at 3.7-A resolution.",
"URL": null,
"raw_pages": "98-103",
"medline_journal": "Proc Natl Acad Sci U S A",
"ISO_journal": "Proc. Natl. Acad. Sci. U.S.A.",
"authors": [
"Kamiya N",
"Shen JR."
],
"DOI_URL": "http://dx.doi.org/10.1073/pnas.0135651100"
},
"PUB00015358": {
"PMID": 15100025,
"ISBN": null,
"volume": "1655",
"issue": "1-3",
"year": 2004,
"title": "The evolutionary development of the protein complement of photosystem 2.",
"URL": null,
"raw_pages": "133-9",
"medline_journal": "Biochim Biophys Acta",
"ISO_journal": "Biochim. Biophys. Acta",
"authors": [
"Raymond J",
"Blankenship RE."
],
"DOI_URL": null
},
"PUB00015359": {
"PMID": 14871485,
"ISBN": null,
"volume": "1608",
"issue": "2-3",
"year": 2004,
"title": "The low molecular mass subunits of the photosynthetic supracomplex, photosystem II.",
"URL": null,
"raw_pages": "75-96",
"medline_journal": "Biochim Biophys Acta",
"ISO_journal": "Biochim. Biophys. Acta",
"authors": [
"Shi LX",
"Schroder WP."
],
"DOI_URL": null
},
"PUB00015360": {
"PMID": 12163077,
"ISBN": null,
"volume": "12",
"issue": "4",
"year": 2002,
"title": "Photosystem II: a multisubunit membrane protein that oxidises water.",
"URL": null,
"raw_pages": "523-30",
"medline_journal": "Curr Opin Struct Biol",
"ISO_journal": "Curr. Opin. Struct. Biol.",
"authors": [
"Barber J."
],
"DOI_URL": "http://dx.doi.org/10.1016/S0959-440X(02)00357-3"
},
"PUB00097583": {
"PMID": 30076221,
"ISBN": null,
"volume": "293",
"issue": "38",
"year": 2018,
"title": "Thylakoid membrane lipid sulfoquinovosyl-diacylglycerol (SQDG) is required for full functioning of photosystem II in <i>Thermosynechococcus elongatus</i>.",
"URL": null,
"raw_pages": "14786-14797",
"medline_journal": "J Biol Chem",
"ISO_journal": "J Biol Chem",
"authors": [
"Nakajima Y",
"Umena Y",
"Nagao R",
"Endo K",
"Kobayashi K",
"Akita F",
"Suga M",
"Wada H",
"Noguchi T",
"Shen JR."
],
"DOI_URL": null
},
"PUB00152828": {
"PMID": 33846594,
"ISBN": null,
"volume": "7",
"issue": "4",
"year": 2021,
"title": "Structural insights into photosystem II assembly.",
"URL": null,
"raw_pages": "524-538",
"medline_journal": "Nat Plants",
"ISO_journal": "Nat Plants",
"authors": [
"Zabret J",
"Bohn S",
"Schuller SK",
"Arnolds O",
"Moller M",
"Meier-Credo J",
"Liauw P",
"Chan A",
"Tajkhorshid E",
"Langer JD",
"Stoll R",
"Krieger-Liszkay A",
"Engel BD",
"Rudack T",
"Schuller JM",
"Nowaczyk MM."
],
"DOI_URL": "https://doi.org/10.1038/s41477-021-00895-0"
}
},
"set_info": null,
"overlaps_with": [
{
"accession": "IPR036001",
"name": "Photosystem antenna protein-like superfamily",
"type": "homologous_superfamily"
},
{
"accession": "IPR044900",
"name": "Photosystem II CP43 reaction centre protein superfamily",
"type": "homologous_superfamily"
}
],
"counters": {
"subfamilies": 0,
"domain_architectures": 0,
"interactions": 0,
"matches": 16454,
"pathways": 0,
"proteins": 16454,
"proteomes": 396,
"sets": 0,
"structural_models": {
"alphafold": 15955,
"bfvd": 0
},
"structures": 165,
"taxa": 22788
},
"entry_annotations": {},
"cross_references": {
"gp": {
"displayName": "Genome Properties",
"description": "Genome properties is an annotation system whereby functional attributes can be assigned to a genome, based on the presence of a defined set of protein signatures within that genome.",
"rank": 45,
"accessions": [
{
"accession": "GenProp0661",
"url": "https://www.ebi.ac.uk/interpro/genomeproperties/genome-property/GenProp0661"
}
]
}
},
"is_llm": false,
"is_reviewed_llm": false,
"is_updated_llm": false,
"representative_structure": {
"accession": "5b66",
"name": "Crystal structure analysis of Photosystem II complex"
}
}
}
