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What is this view?

Binary interactions

In this tab, we display the list of interactions that you have selected using one of our search features. Despite the fact that our data are annotated to accurately reflect the interactions reported in scientific literature, the data is shown in this view as binary interactions. Whenever the data was reported as a co-complex involving more than two molecules, we store it as such in the IntAct database and post-process it so the portal can show it as binary interaction. This post-processing is the Spoke Expansion model (connects bait to all preys):



sourceExp

At any moment you can choose to display the expansion column in this view in order to see which interaction are spoke expanded and which are not.

Description of what has changed

  • We have added more download options to allow users to retrieve their interaction set using more standard formats such as PSI-MI XML and PSIMITAB (version 2.5, 2.6 or 2.7) but also XGMML, RDF and Biopax (level 2 and 3).
  • We have now four different table views : minimal(molecule names and interaction AC), basic (minimal + molecule links, interaction detection method, negative), standard(minimal + molecule species, confidences, publication details, experiment details), expanded (standard + more experiment details) and complete (all mitab 2.7 columns).

Configuring the view to your need"

In the header of the interaction table you will find a button: ‘Change Column Display’ that will show you all the columns/Table views available and allow you to update the current selected set.

Downloading the data into Standard formats"

In the header of the interaction table you will find a drop down list that contains all the formats currently supported when downloading the interaction data. Select one of them and click the export button next to the list. Please note that PSI-MI XML is only available when the interaction set is no bigger than 1000 interactions.

Opening the interaction details"

Clicking on the magnifying glass in the first column of the interaction table will open the details of the corresponding interaction in the Interaction Details tab, giving you access to more details of the manually curated record.

What is this view?

Browsing (Browse Tab)

This tab is meant to give you access to more content based on the currently selected set of interactions. Please note that linking to third party resources will only include up to 200 molecules , if you exceed this number you will see the warning icon (This number has been reduced to 125 molecules for mRNA expression). Now let’s look at the features available to you:

Limiting the scope of the current dataset with the Uniprot Taxonomy ontology

Allows users to browse the Uniprot Taxonomy hierarchy as a tree and select terms in order to narrow down their dataset. Once a term is selected, you are taken back to the interaction tab to review your dataset.

Limiting the scope of the current dataset with the GO ontology

Allows users to browse the GO hierarchy as a tree and select terms in order to narrow down their dataset. Once a term is selected, you are taken back to the interaction tab to review your dataset.

Limiting the scope of the current dataset with the ChEBI ontology

Allows users to browse the ChEBI hierarchy as a tree and select terms in order to narrow down their dataset. Once a term is selected, you are taken back to the interaction tab to review your dataset.

Bulk linking to third party resources by using involved proteins

  • Proteins by Reactome pathway: Sends your proteins to the Reactome SkyPainter that will show you the pathways in which these molecules are know to play a role.
  • Proteins by Chromosomal location: Sends your list of proteins to Ensembl’s Karyotype viewer and overlays the proteins on the chromosomes.
  • Proteins by mRNA expression: Sends your set of proteins to the ArrayExpress Atlas that will show the known gene expression based on experimental studies.
What is this view?

Searching Interactions (Search Tab)

As you can see in this tab we are now trying to give you more targeted choice to do your queries, please note that the examples provided in this tab are live links so you can simply click them to see the resulting interactions sets.

Using the Quick Search

In this search panel you are free to type anything that might relate to interactions, whether it is properties of their interactor (gene name, identifiers, GO term…) or more specific to the interaction like publication, authors, experimental detection method, ...

Some examples:

  • Try the query: imatinib
    This is a drug for which we have curated a number of interactions.
    Once you press the search button you should be taken to the Interaction Tab that lists 130 binary interactions.
    If you want to construct more complex queries we recommend you take a look at the Molecular Interaction Query Language, accessible from the quick search panel.
  • Try the query: species:yeast AND type:"direct interaction"
    This query selects all interactions involving yeast interactors that have been shown to have direct interactions. If you customize the column display of the interaction tab, you will see that not only “direct interaction” have been selected but also children terms in the PSI-MI ontology.

Using the Ontology Search

Open the Rearch Tab. This panel is specialised to give you an easy access to ontology search. So far you can search on 4 ontologies:

  • Gene Ontology
  • InterPro
  • PSI-MI
  • ChEBI

Whenever you start typing a query in this search panel, the system will search as you type and propose a list of matching controlled vocabulary terms. You can then select one of them and select matching interactions.

For example, type: cancer
You will be presented with a few choices, please note that each term is followed by the count of matching interactions in the IntAct database.

Select a term with the mouse or using the keyboard cursor keys and you will be taken to the interaction tab.

Searching the Compound chemical structure

In this panel you will be able to draw all or part of a chemical structure and search for chemical compounds. If you get any matched, you can then see all interactions involving them.

First you have to open up the chemical search panel so that the applet can load, it might take a few seconds. Then you can start drawing your structure, for instance:

Once you have drawn your structure, select Similarity and press Search. You should be presented with a list of matching compound. Now choose one molecule and click the link: IntAct interactions. You will be taken to the interaction tab to review the data.

Complex Expansion

Binary interactions generated by co-complex expansion

Why should you care about complex expansion ?

Some experimental methods such as Tandem Affinity Purification do generate molecular interactions that can involve more than 2 molecules. Despite the fact that IntAct curation team do capture the molecular interaction as they were reported in the corresponding experiment, when you search using the intact web site, the results of your query is always shown as set of binary interactions (i.e. 2 molecules). We would like to draw your attention on the fact that whenever the reported interaction was a co-complex we do apply an expansion algorithm that transform this n-ary interaction into a set of binary interactions. While none of these agorithms is perfect and will very likely generate some false positive interactions, it is useful to present the data in a consistent manner. Bear in mind that we will strive to differentiate in the search results which interactions are a real experimental binary from expanded ones.

Existing expansion algorithm

There are several known algorithm allowing to transform an n-ary interaction into a set of binaries. The illustration below present the two well known expansion model and illustrates why they can be incorrect.



sourceExp

  • Spoke expansion: Links the bait molecule to all prey molecules. If N is the count of molecule in the complex, it generated N-1 binary interactions.
  • Matrix expansion: Links all molecule to all other molecule present in the complex. If N is the count of molecule in the complex, it generated (N*(N-1))/2 binary interactions.

Now the issue (as illustrated at the bottom right of the diagram above) with these two models lies in the fact that the real complex might not be articulated around the experimental bait but instead, this bait might be linked to a smaller complex, hence most binary interaction generated by spoke and matrix expansion result in false positive.



PSICQUIC

How is the number of interactions in other databases obtained?

PSICQUIC is a standard way to access molecular interaction databases across which it repeats the same query. The number of databases providing data may vary, depending on the status of their services and only those that are active are used in this query. By clicking on the number of interactions you will be redirected to the PSICQUIC View, where you can browse the results in those other resources.

The services currently active are:

Check the PSICQUIC site for more information.

IMEx

What is the significance of the IMEx dataset?"

IMEx is a network of databases which have agreed to supply a non-redundant set of data expertly manually annotated to the same consistent detailed standard which, as such, represents a high-quality subset of the data each individually provides. The number of databases providing data may vary, depending on the status of their services and only those that are active are used in this query. By clicking on the number of interactions you will be redirected to the IMEx View, where you can browse the results in those other resources.

The services currently active are:

Check the IMEx site for more information.

What is this view?

Representation of Experimental Features

This section shows the graphical representation of experimental features, where each participant is represented as a white rectangle with a black border and a line for each hundredth amino acid. All available features are attached to their associated participant and their categories are represented in the right side of the legend. The left side of the legend dynamically shows the range statuses occuring in the shown interaction. These are the possible range statuses:

sourceExp

Interacting with the widget

Hover over a feature to see more information in a tooltip.
sourceExp

To display a single interacting region click on it and click again to display all interacting regions.
Displaying all interacting regionsDisplaying one interacting region
sourceExpsourceExp
What is this view?

Dynamic molecular interaction data

This section shows the graphical representation of dynamic molecular interactions. By default it displays all the interactions from one experiment using radio buttons to allow users to highlight interactions in different variable conditions.

Publication

PubMed Id: 20562859

Journal: Nature (0028-0836)

Year of Publication: 2010

Title: Network organization of the human autophagy system.

Author List: Behrends C., Sowa ME., Gygi SP., Harper JW.

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-
-

Experiment (5 interactions)

Accession: EBI-3044052

Name: behrends-2010-7

Host organism: Homo sapiens 293 cells transformed with SV40 large T antigen

Organism: Homo sapiens 293 cells transformed with SV40 large T antigen

Accession: EBI-308002

Name: human-293t

Description: Homo sapiens 293 cells transformed with SV40 large T antigen

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human
-

Interaction Detection Method: anti tag coip

Interaction detection method: anti tag coip
Accession: EBI-90

Name: anti tag coip

Description: anti tag coimmunoprecipitation

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0007
-
identity
pubmed
7708014
-
primary-reference


Annotations:
Topic
Text
definition
A specific antibody for the molecule of interest is not available, therefore the bait protein is expressed as a hybrid protein fused to a tag peptide/protein for which efficient and specific antibodies or a specific ligand are available.


Participant Identification Method: sequence tag

Participant identification method: sequence tag
Accession: EBI-81

Name: sequence tag

Description: sequence tag identification

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0102
-
identity
pubmed
10967324
-
primary-reference
pubmed
11752590
-
primary-reference
pubmed
11805837
-
primary-reference


Annotations:
Topic
Text
definition
This approach leads to protein identification by combining mass measurement and short amino acid sequence information obtained by tandem mass spectrometry. This information is then used to automatically find the best match in a sequence database. A mixture of peptides derived from a protease digestion is analysed by nanoelectrospray LC-MS/MS (Liquid Chromatography Tandem Mass Spectrometer or nanoESI MS/MS) mass spectrometry. Electrospray mass spectrometry cannot be applied to dilute samples and is affected by high salt. As a consequence peptides, normally extracted from acrylamide gels by in situ proteolysis, are desalted and concentrated on a microcolumn followed by elution into a capillary used for nanoelectrospray tandem mass spectrometry. A first mass spectrum (Normal mass spectrum or Q1 mass spectrum) gives information about the masses of all the peptides. Peptides observed in the normal mass spectrum are isolated in turn and dissociated into fragments by collision with gas molecules within the mass spectrometer. Some of the fragments obtained from a peptide constitute a nested set, differing by one amino acid, and the mass difference between them allows assignment of a partial sequence. The masses of the fragments define the position of the partial sequence in the peptide. Together with the cleavage specificity of the protease used to cleave the protein, and mass information such sequence tag provides much higher search specificity to match the a database entry. The procedure is repeated with several peptides from the digest, resulting in multiple identifications of the same protein or identification of several proteins from the peptide mixture. Unknown proteins can easily be identified by using the high specificity of the peptide sequence tag for searches in most sequence databases including EST or genome databases.


Cross References:

Database
Identifier
Secondary identifier
Qualifier
-
-

Annotations:

Topic
Text
wade_harper@hms.harvard.edu
Participants were identified based on results from LTQ linear ion trap LC MS/MS.
The bait had a deleted c terminal glycine
High-confidence candidate interaction proteins were identified using CompPASS, an automated MS/MS data-processing component, a protein function/annotation component, and an interaction network analysis component adapted to aid in the identification of interacting proteins that are associated with multiple baits in a network. Interactors were scored using the D score which incorporates the uniqueness, the abundance of the interactor (TSC), and the reproducibility of the interaction to assign a score to each protein within each IP (the same protein in two different IPs may have distinct D scores since its TSC and reproducibility could differ). In this way, the highest scores are given to proteins in each IP that are found rarely, found in duplicate runs, and have high TSCs-all characteristics of proteins that would be considered candidate interactors. A global D score threshold (DT) is determined and all raw D scores (DR) are normalized to this value, producing DN scores. For further details, see PMID: 19615732.
A large number of proteins bind the mutant protein; these are not included in the autophagy interactome built from the wild-type data.
imex curation
Only protein-protein interactions
-

Interaction

Accession: EBI-3044058

Name: map1lc3a-acta2

Description: -

Type: association

Interaction type: association
Accession: EBI-1813191

Name: association

Description: association

Cross References:
Database
Identifier
Secondary identifier
Qualifier
pubmed
14755292
-
primary-reference
psi-mi
MI:0914
-
identity


Annotations:
Topic
Text
definition
Interaction between molecules that may participate in formation of one, but possibly more, physical complexes. Often describes a set of molecules that are co-purified in a single pull-down or coimmunoprecipitation but might participate in formation of distinct physical complexes sharing a common bait.


Cross References:

Database
Identifier
Secondary identifier
Qualifier
-
-

Annotations:

Topic
Text
Table S3

Participants (358)

Legend:
A
Annotation and Cross Reference  
P
Experimental Parameter   
S
Stoichiometry   
F
Experimental Feature
C
Participant Confidence
pp12345678910pp
#
Name
Links
Primary Identifier
Aliases
Description
Species
Expression system
Experimental role
Biological role
Interactor type
More...
pp12345678910pp
1
EBI-720768
 logo
MAP1LC3A
Microtubule-associated protein 1 light chain 3 alpha
MAP1A/MAP1B light chain 3 A

[+3]
Microtubule-associated proteins 1A/1B light chain 3A
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
bait
Experimental role: bait
Accession: EBI-49

Name: bait

Description: bait

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0496
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally treated to capture its interacting partners.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference
so
SO:0000358
-
see-also


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Microtubule-associated proteins 1A/1B light chain 3A

Participant: Microtubule-associated proteins 1A/1B light chain 3A

Accession: EBI-3044205

Name: EBI-720768

P
Participant: Microtubule-associated proteins 1A/1B light chain 3A

Participant: Microtubule-associated proteins 1A/1B light chain 3A

Accession: EBI-3044205

Name: EBI-720768

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Microtubule-associated proteins 1A/1B light chain 3A

Participant: Microtubule-associated proteins 1A/1B light chain 3A

Accession: EBI-3044205

Name: EBI-720768

Stoichiometry: 0.0

F
Participant: Microtubule-associated proteins 1A/1B light chain 3A

Participant: Microtubule-associated proteins 1A/1B light chain 3A

Accession: EBI-3044205

Name: EBI-720768

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
n-terminal region
  • n-n
  • A
    Feature: EBI-3044207

    Feature: n-terminal region

    Accession: EBI-3044207

    Name: n-terminal region


    C
    Participant: Microtubule-associated proteins 1A/1B light chain 3A

    Participant: Microtubule-associated proteins 1A/1B light chain 3A

    Accession: EBI-3044205

    Name: EBI-720768

    Confidences:

    Type
    Value
    No records found.

    2
    EBI-352869
     logo
    SAFB2
    KIAA0138
    Scaffold attachment factor B2
    Homo sapiens
    Organism Details

    Accession: EBI-874

    Name: human

    Description: Homo sapiens

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    human

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference
    so
    SO:0000358
    -
    see-also


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: Scaffold attachment factor B2

    Participant: Scaffold attachment factor B2

    Accession: EBI-3044097

    Name: EBI-352869

    P
    Participant: Scaffold attachment factor B2

    Participant: Scaffold attachment factor B2

    Accession: EBI-3044097

    Name: EBI-352869

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: Scaffold attachment factor B2

    Participant: Scaffold attachment factor B2

    Accession: EBI-3044097

    Name: EBI-352869

    Stoichiometry: 0.0

    F
    Participant: Scaffold attachment factor B2

    Participant: Scaffold attachment factor B2

    Accession: EBI-3044097

    Name: EBI-352869

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: Scaffold attachment factor B2

    Participant: Scaffold attachment factor B2

    Accession: EBI-3044097

    Name: EBI-352869

    Confidences:

    Type
    Value
    Spectral count =14
    Weighted DNScore =124.97
    14
    124.97
    High

    3
    EBI-358311
     logo
    Cyclin
    PCNA
    Proliferating cell nuclear antigen
    Homo sapiens
    Organism Details

    Accession: EBI-874

    Name: human

    Description: Homo sapiens

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    human

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference
    so
    SO:0000358
    -
    see-also


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: Proliferating cell nuclear antigen

    Participant: Proliferating cell nuclear antigen

    Accession: EBI-3044101

    Name: EBI-358311

    P
    Participant: Proliferating cell nuclear antigen

    Participant: Proliferating cell nuclear antigen

    Accession: EBI-3044101

    Name: EBI-358311

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: Proliferating cell nuclear antigen

    Participant: Proliferating cell nuclear antigen

    Accession: EBI-3044101

    Name: EBI-358311

    Stoichiometry: 0.0

    F
    Participant: Proliferating cell nuclear antigen

    Participant: Proliferating cell nuclear antigen

    Accession: EBI-3044101

    Name: EBI-358311

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: Proliferating cell nuclear antigen

    Participant: Proliferating cell nuclear antigen

    Accession: EBI-3044101

    Name: EBI-358311

    Confidences:

    Type
    Value
    Spectral count =2
    Weighted DNScore =2.39
    2
    2.39
    High

    4
    EBI-286199
     logo
    DXS1179E
    nPKC-iota
    Atypical protein kinase C-lambda/iota

    [+1]
    Protein kinase C iota type
    Homo sapiens
    Organism Details

    Accession: EBI-874

    Name: human

    Description: Homo sapiens

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    human

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference
    so
    SO:0000358
    -
    see-also


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: Protein kinase C iota type

    Participant: Protein kinase C iota type

    Accession: EBI-3044105

    Name: EBI-286199

    P
    Participant: Protein kinase C iota type

    Participant: Protein kinase C iota type

    Accession: EBI-3044105

    Name: EBI-286199

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: Protein kinase C iota type

    Participant: Protein kinase C iota type

    Accession: EBI-3044105

    Name: EBI-286199

    Stoichiometry: 0.0

    F
    Participant: Protein kinase C iota type

    Participant: Protein kinase C iota type

    Accession: EBI-3044105

    Name: EBI-286199

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: Protein kinase C iota type

    Participant: Protein kinase C iota type

    Accession: EBI-3044105

    Name: EBI-286199

    Confidences:

    Type
    Value
    Spectral count =4
    Weighted DNScore =50.66
    4
    50.66
    High

    5
    EBI-372177
     logo
    SNRPD1
    snRNP core protein D1
    Sm-D autoantigen
    Small nuclear ribonucleoprotein Sm D1
    Homo sapiens
    Organism Details

    Accession: EBI-874

    Name: human

    Description: Homo sapiens

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    human

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference
    so
    SO:0000358
    -
    see-also


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: Small nuclear ribonucleoprotein Sm D1

    Participant: Small nuclear ribonucleoprotein Sm D1

    Accession: EBI-3044109

    Name: EBI-372177

    P
    Participant: Small nuclear ribonucleoprotein Sm D1

    Participant: Small nuclear ribonucleoprotein Sm D1

    Accession: EBI-3044109

    Name: EBI-372177

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: Small nuclear ribonucleoprotein Sm D1

    Participant: Small nuclear ribonucleoprotein Sm D1

    Accession: EBI-3044109

    Name: EBI-372177

    Stoichiometry: 0.0

    F
    Participant: Small nuclear ribonucleoprotein Sm D1

    Participant: Small nuclear ribonucleoprotein Sm D1

    Accession: EBI-3044109

    Name: EBI-372177

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: Small nuclear ribonucleoprotein Sm D1

    Participant: Small nuclear ribonucleoprotein Sm D1

    Accession: EBI-3044109

    Name: EBI-372177

    Confidences:

    Type
    Value
    Spectral count =6
    Weighted DNScore =2.62
    6
    2.62
    High

    6
    EBI-1059150
     logo
    HNRNPUL2
    HNRPUL2
    Scaffold-attachment factor A2
    Heterogeneous nuclear ribonucleoprotein U-like protein 2
    Homo sapiens
    Organism Details

    Accession: EBI-874

    Name: human

    Description: Homo sapiens

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    human

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference
    so
    SO:0000358
    -
    see-also


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: Heterogeneous nuclear ribonucleoprotein U-like protein 2

    Participant: Heterogeneous nuclear ribonucleoprotein U-like protein 2

    Accession: EBI-3044113

    Name: EBI-1059150

    P
    Participant: Heterogeneous nuclear ribonucleoprotein U-like protein 2

    Participant: Heterogeneous nuclear ribonucleoprotein U-like protein 2

    Accession: EBI-3044113

    Name: EBI-1059150

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: Heterogeneous nuclear ribonucleoprotein U-like protein 2

    Participant: Heterogeneous nuclear ribonucleoprotein U-like protein 2

    Accession: EBI-3044113

    Name: EBI-1059150

    Stoichiometry: 0.0

    F
    Participant: Heterogeneous nuclear ribonucleoprotein U-like protein 2

    Participant: Heterogeneous nuclear ribonucleoprotein U-like protein 2

    Accession: EBI-3044113

    Name: EBI-1059150

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: Heterogeneous nuclear ribonucleoprotein U-like protein 2

    Participant: Heterogeneous nuclear ribonucleoprotein U-like protein 2

    Accession: EBI-3044113

    Name: EBI-1059150

    Confidences:

    Type
    Value
    Spectral count =2
    Weighted DNScore =2.76
    2
    2.76
    High

    7
    EBI-355106
     logo
    Heat shock 70 kDa protein B'
    HSPA6
    HSP70B'
    Heat shock 70 kDa protein 6
    Homo sapiens
    Organism Details

    Accession: EBI-874

    Name: human

    Description: Homo sapiens

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    human

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference
    so
    SO:0000358
    -
    see-also


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: Heat shock 70 kDa protein 6

    Participant: Heat shock 70 kDa protein 6

    Accession: EBI-3044117

    Name: EBI-355106

    P
    Participant: Heat shock 70 kDa protein 6

    Participant: Heat shock 70 kDa protein 6

    Accession: EBI-3044117

    Name: EBI-355106

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: Heat shock 70 kDa protein 6

    Participant: Heat shock 70 kDa protein 6

    Accession: EBI-3044117

    Name: EBI-355106

    Stoichiometry: 0.0

    F
    Participant: Heat shock 70 kDa protein 6

    Participant: Heat shock 70 kDa protein 6

    Accession: EBI-3044117

    Name: EBI-355106

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: Heat shock 70 kDa protein 6

    Participant: Heat shock 70 kDa protein 6

    Accession: EBI-3044117

    Name: EBI-355106

    Confidences:

    Type
    Value
    Spectral count =5
    Weighted DNScore =6.02
    5
    6.02
    High

    8
    EBI-78579
     logo
    Nucleolar phosphoprotein B23
    Numatrin
    Nucleolar protein NO38

    [+2]
    Nucleophosmin
    Homo sapiens
    Organism Details

    Accession: EBI-874

    Name: human

    Description: Homo sapiens

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    human

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference
    so
    SO:0000358
    -
    see-also


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: Nucleophosmin

    Participant: Nucleophosmin

    Accession: EBI-3044121

    Name: EBI-78579

    P
    Participant: Nucleophosmin

    Participant: Nucleophosmin

    Accession: EBI-3044121

    Name: EBI-78579

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: Nucleophosmin

    Participant: Nucleophosmin

    Accession: EBI-3044121

    Name: EBI-78579

    Stoichiometry: 0.0

    F
    Participant: Nucleophosmin

    Participant: Nucleophosmin

    Accession: EBI-3044121

    Name: EBI-78579

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: Nucleophosmin

    Participant: Nucleophosmin

    Accession: EBI-3044121

    Name: EBI-78579

    Confidences:

    Type
    Value
    Spectral count =7
    Weighted DNScore =2.87
    7
    2.87
    High

    9
    EBI-536755
     logo
    C20orf14
    Androgen receptor N-terminal domain-transactivating protein 1
    U5 snRNP-associated 102 kDa protein

    [+2]
    Pre-mRNA-processing factor 6
    Homo sapiens
    Organism Details

    Accession: EBI-874

    Name: human

    Description: Homo sapiens

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    human

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference
    so
    SO:0000358
    -
    see-also


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: Pre-mRNA-processing factor 6

    Participant: Pre-mRNA-processing factor 6

    Accession: EBI-3044125

    Name: EBI-536755

    P
    Participant: Pre-mRNA-processing factor 6

    Participant: Pre-mRNA-processing factor 6

    Accession: EBI-3044125

    Name: EBI-536755

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: Pre-mRNA-processing factor 6

    Participant: Pre-mRNA-processing factor 6

    Accession: EBI-3044125

    Name: EBI-536755

    Stoichiometry: 0.0

    F
    Participant: Pre-mRNA-processing factor 6

    Participant: Pre-mRNA-processing factor 6

    Accession: EBI-3044125

    Name: EBI-536755

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: Pre-mRNA-processing factor 6

    Participant: Pre-mRNA-processing factor 6

    Accession: EBI-3044125

    Name: EBI-536755

    Confidences:

    Type
    Value
    Spectral count =2
    Weighted DNScore =7.99
    2
    7.99
    High

    10
    EBI-1171113
     logo
    CLINT1
    ENTH
    EPN4

    [+6]
    Clathrin interactor 1
    Homo sapiens
    Organism Details

    Accession: EBI-874

    Name: human

    Description: Homo sapiens

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    human

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference
    so
    SO:0000358
    -
    see-also


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: Clathrin interactor 1

    Participant: Clathrin interactor 1

    Accession: EBI-3044129

    Name: EBI-1171113

    P
    Participant: Clathrin interactor 1

    Participant: Clathrin interactor 1

    Accession: EBI-3044129

    Name: EBI-1171113

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: Clathrin interactor 1

    Participant: Clathrin interactor 1

    Accession: EBI-3044129

    Name: EBI-1171113

    Stoichiometry: 0.0

    F
    Participant: Clathrin interactor 1

    Participant: Clathrin interactor 1

    Accession: EBI-3044129

    Name: EBI-1171113

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: Clathrin interactor 1

    Participant: Clathrin interactor 1

    Accession: EBI-3044129

    Name: EBI-1171113

    Confidences:

    Type
    Value
    Spectral count =2
    Weighted DNScore =33.74
    2
    33.74
    High

    11
    EBI-352986
     logo
    HNRPF
    Nucleolin-like protein mcs94-1
    HNRNPF
    Heterogeneous nuclear ribonucleoprotein F
    Homo sapiens
    Organism Details

    Accession: EBI-874

    Name: human

    Description: Homo sapiens

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    human

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference
    so
    SO:0000358
    -
    see-also


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: Heterogeneous nuclear ribonucleoprotein F

    Participant: Heterogeneous nuclear ribonucleoprotein F

    Accession: EBI-3044133

    Name: EBI-352986

    P
    Participant: Heterogeneous nuclear ribonucleoprotein F

    Participant: Heterogeneous nuclear ribonucleoprotein F

    Accession: EBI-3044133

    Name: EBI-352986

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: Heterogeneous nuclear ribonucleoprotein F

    Participant: Heterogeneous nuclear ribonucleoprotein F

    Accession: EBI-3044133

    Name: EBI-352986

    Stoichiometry: 0.0

    F
    Participant: Heterogeneous nuclear ribonucleoprotein F

    Participant: Heterogeneous nuclear ribonucleoprotein F

    Accession: EBI-3044133

    Name: EBI-352986

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: Heterogeneous nuclear ribonucleoprotein F

    Participant: Heterogeneous nuclear ribonucleoprotein F

    Accession: EBI-3044133

    Name: EBI-352986

    Confidences:

    Type
    Value
    Spectral count =10
    Weighted DNScore =3.16
    10
    3.16
    High

    12
    EBI-724373
     logo
    BEND5
    C1orf165
    BEN domain-containing protein 5
    Homo sapiens
    Organism Details

    Accession: EBI-874

    Name: human

    Description: Homo sapiens

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    human

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference
    so
    SO:0000358
    -
    see-also


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: BEN domain-containing protein 5

    Participant: BEN domain-containing protein 5

    Accession: EBI-3044137

    Name: EBI-724373

    P
    Participant: BEN domain-containing protein 5

    Participant: BEN domain-containing protein 5

    Accession: EBI-3044137

    Name: EBI-724373

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: BEN domain-containing protein 5

    Participant: BEN domain-containing protein 5

    Accession: EBI-3044137

    Name: EBI-724373

    Stoichiometry: 0.0

    F
    Participant: BEN domain-containing protein 5

    Participant: BEN domain-containing protein 5

    Accession: EBI-3044137

    Name: EBI-724373

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: BEN domain-containing protein 5

    Participant: BEN domain-containing protein 5

    Accession: EBI-3044137

    Name: EBI-724373

    Confidences:

    Type
    Value
    Spectral count =1
    Weighted DNScore =7.46
    1
    7.46
    High

    13
    EBI-1046507
     logo
    HNRNPCL1
    hnRNP core protein C-like 1
    HNRPCL1
    Heterogeneous nuclear ribonucleoprotein C-like 1
    Homo sapiens
    Organism Details

    Accession: EBI-874

    Name: human

    Description: Homo sapiens

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    human

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference
    so
    SO:0000358
    -
    see-also


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: Heterogeneous nuclear ribonucleoprotein C-like 1

    Participant: Heterogeneous nuclear ribonucleoprotein C-like 1

    Accession: EBI-3044141

    Name: EBI-1046507

    P
    Participant: Heterogeneous nuclear ribonucleoprotein C-like 1

    Participant: Heterogeneous nuclear ribonucleoprotein C-like 1

    Accession: EBI-3044141

    Name: EBI-1046507

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: Heterogeneous nuclear ribonucleoprotein C-like 1

    Participant: Heterogeneous nuclear ribonucleoprotein C-like 1

    Accession: EBI-3044141

    Name: EBI-1046507

    Stoichiometry: 0.0

    F
    Participant: Heterogeneous nuclear ribonucleoprotein C-like 1

    Participant: Heterogeneous nuclear ribonucleoprotein C-like 1

    Accession: EBI-3044141

    Name: EBI-1046507

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: Heterogeneous nuclear ribonucleoprotein C-like 1

    Participant: Heterogeneous nuclear ribonucleoprotein C-like 1

    Accession: EBI-3044141

    Name: EBI-1046507

    Confidences:

    Type
    Value
    Spectral count =4
    Weighted DNScore =2.31
    4
    2.31
    High

    14
    EBI-2880285
     logo
    RRP1
    D21S2056E
    NNP1

    [+5]
    Ribosomal RNA processing protein 1 homolog A
    Homo sapiens
    Organism Details

    Accession: EBI-874

    Name: human

    Description: Homo sapiens

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    human

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference
    so
    SO:0000358
    -
    see-also


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: Ribosomal RNA processing protein 1 homolog A

    Participant: Ribosomal RNA processing protein 1 homolog A

    Accession: EBI-3044145

    Name: EBI-2880285

    P
    Participant: Ribosomal RNA processing protein 1 homolog A

    Participant: Ribosomal RNA processing protein 1 homolog A

    Accession: EBI-3044145

    Name: EBI-2880285

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: Ribosomal RNA processing protein 1 homolog A

    Participant: Ribosomal RNA processing protein 1 homolog A

    Accession: EBI-3044145

    Name: EBI-2880285

    Stoichiometry: 0.0

    F
    Participant: Ribosomal RNA processing protein 1 homolog A

    Participant: Ribosomal RNA processing protein 1 homolog A

    Accession: EBI-3044145

    Name: EBI-2880285

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: Ribosomal RNA processing protein 1 homolog A

    Participant: Ribosomal RNA processing protein 1 homolog A

    Accession: EBI-3044145

    Name: EBI-2880285

    Confidences:

    Type
    Value
    Spectral count =2
    Weighted DNScore =7.46
    2
    7.46
    High

    15
    EBI-702187
     logo
    KRT5
    Keratin-5
    Type-II keratin Kb5

    [+2]
    Keratin, type II cytoskeletal 5
    Homo sapiens
    Organism Details

    Accession: EBI-874

    Name: human

    Description: Homo sapiens

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    human

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference
    so
    SO:0000358
    -
    see-also


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: Keratin, type II cytoskeletal 5

    Participant: Keratin, type II cytoskeletal 5

    Accession: EBI-3044149

    Name: EBI-702187

    P
    Participant: Keratin, type II cytoskeletal 5

    Participant: Keratin, type II cytoskeletal 5

    Accession: EBI-3044149

    Name: EBI-702187

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: Keratin, type II cytoskeletal 5

    Participant: Keratin, type II cytoskeletal 5

    Accession: EBI-3044149

    Name: EBI-702187

    Stoichiometry: 0.0

    F
    Participant: Keratin, type II cytoskeletal 5

    Participant: Keratin, type II cytoskeletal 5

    Accession: EBI-3044149

    Name: EBI-702187

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: Keratin, type II cytoskeletal 5

    Participant: Keratin, type II cytoskeletal 5

    Accession: EBI-3044149

    Name: EBI-702187

    Confidences:

    Type
    Value
    Spectral count =4
    Weighted DNScore =2.53
    4
    2.53
    High

    16
    EBI-720116
     logo
    GABARAPL2
    FLC3A
    GEF2

    [+5]
    Gamma-aminobutyric acid receptor-associated protein-like 2
    Homo sapiens
    Organism Details

    Accession: EBI-874

    Name: human

    Description: Homo sapiens

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    human

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference
    so
    SO:0000358
    -
    see-also


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: Gamma-aminobutyric acid receptor-associated protein-like 2

    Participant: Gamma-aminobutyric acid receptor-associated protein-like 2

    Accession: EBI-3044153

    Name: EBI-720116

    P
    Participant: Gamma-aminobutyric acid receptor-associated protein-like 2

    Participant: Gamma-aminobutyric acid receptor-associated protein-like 2

    Accession: EBI-3044153

    Name: EBI-720116

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: Gamma-aminobutyric acid receptor-associated protein-like 2

    Participant: Gamma-aminobutyric acid receptor-associated protein-like 2

    Accession: EBI-3044153

    Name: EBI-720116

    Stoichiometry: 0.0

    F
    Participant: Gamma-aminobutyric acid receptor-associated protein-like 2

    Participant: Gamma-aminobutyric acid receptor-associated protein-like 2

    Accession: EBI-3044153

    Name: EBI-720116

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: Gamma-aminobutyric acid receptor-associated protein-like 2

    Participant: Gamma-aminobutyric acid receptor-associated protein-like 2

    Accession: EBI-3044153

    Name: EBI-720116

    Confidences:

    Type
    Value
    Spectral count =2
    Weighted DNScore =5.66
    2
    5.66
    High

    17
    EBI-354380
     logo
    CLL-associated antigen KW-12
    Large ribosomal subunit protein uL5
    RPL11
    60S ribosomal protein L11
    Homo sapiens
    Organism Details

    Accession: EBI-874

    Name: human

    Description: Homo sapiens

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    human

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference
    so
    SO:0000358
    -
    see-also


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: 60S ribosomal protein L11

    Participant: 60S ribosomal protein L11

    Accession: EBI-3044157

    Name: EBI-354380

    P
    Participant: 60S ribosomal protein L11

    Participant: 60S ribosomal protein L11

    Accession: EBI-3044157

    Name: EBI-354380

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: 60S ribosomal protein L11

    Participant: 60S ribosomal protein L11

    Accession: EBI-3044157

    Name: EBI-354380

    Stoichiometry: 0.0

    F
    Participant: 60S ribosomal protein L11

    Participant: 60S ribosomal protein L11

    Accession: EBI-3044157

    Name: EBI-354380

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: 60S ribosomal protein L11

    Participant: 60S ribosomal protein L11

    Accession: EBI-3044157

    Name: EBI-354380

    Confidences:

    Type
    Value
    Spectral count =1
    Weighted DNScore =1.05
    1
    1.05
    High

    18
    EBI-748336
     logo
    PRDX3
    AOP1
    Peroxiredoxin-3

    [+4]
    Thioredoxin-dependent peroxide reductase, mitochondrial
    Homo sapiens
    Organism Details

    Accession: EBI-874

    Name: human

    Description: Homo sapiens

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    human

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference
    so
    SO:0000358
    -
    see-also


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: Thioredoxin-dependent peroxide reductase, mitochondrial

    Participant: Thioredoxin-dependent peroxide reductase, mitochondrial

    Accession: EBI-3044161

    Name: EBI-748336

    P
    Participant: Thioredoxin-dependent peroxide reductase, mitochondrial

    Participant: Thioredoxin-dependent peroxide reductase, mitochondrial

    Accession: EBI-3044161

    Name: EBI-748336

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: Thioredoxin-dependent peroxide reductase, mitochondrial

    Participant: Thioredoxin-dependent peroxide reductase, mitochondrial

    Accession: EBI-3044161

    Name: EBI-748336

    Stoichiometry: 0.0

    F
    Participant: Thioredoxin-dependent peroxide reductase, mitochondrial

    Participant: Thioredoxin-dependent peroxide reductase, mitochondrial

    Accession: EBI-3044161

    Name: EBI-748336

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: Thioredoxin-dependent peroxide reductase, mitochondrial

    Participant: Thioredoxin-dependent peroxide reductase, mitochondrial

    Accession: EBI-3044161

    Name: EBI-748336

    Confidences:

    Type
    Value
    Spectral count =2
    Weighted DNScore =2.39
    2
    2.39
    High

    19
    EBI-1054743
     logo
    Spliceosome-associated protein 114
    SF3a120
    SF3A1

    [+1]
    Splicing factor 3A subunit 1
    Homo sapiens
    Organism Details

    Accession: EBI-874

    Name: human

    Description: Homo sapiens

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    human

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference
    so
    SO:0000358
    -
    see-also


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: Splicing factor 3A subunit 1

    Participant: Splicing factor 3A subunit 1

    Accession: EBI-3044165

    Name: EBI-1054743

    P
    Participant: Splicing factor 3A subunit 1

    Participant: Splicing factor 3A subunit 1

    Accession: EBI-3044165

    Name: EBI-1054743

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: Splicing factor 3A subunit 1

    Participant: Splicing factor 3A subunit 1

    Accession: EBI-3044165

    Name: EBI-1054743

    Stoichiometry: 0.0

    F
    Participant: Splicing factor 3A subunit 1

    Participant: Splicing factor 3A subunit 1

    Accession: EBI-3044165

    Name: EBI-1054743

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: Splicing factor 3A subunit 1

    Participant: Splicing factor 3A subunit 1

    Accession: EBI-3044165

    Name: EBI-1054743

    Confidences:

    Type
    Value
    Spectral count =1
    Weighted DNScore =6.84
    1
    6.84
    High

    20
    EBI-351126
     logo
    HNRPU
    p120
    pp120

    [+7]
    Heterogeneous nuclear ribonucleoprotein U
    Homo sapiens
    Organism Details

    Accession: EBI-874

    Name: human

    Description: Homo sapiens

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    human

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference
    so
    SO:0000358
    -
    see-also


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: Heterogeneous nuclear ribonucleoprotein U

    Participant: Heterogeneous nuclear ribonucleoprotein U

    Accession: EBI-3044169

    Name: EBI-351126

    P
    Participant: Heterogeneous nuclear ribonucleoprotein U

    Participant: Heterogeneous nuclear ribonucleoprotein U

    Accession: EBI-3044169

    Name: EBI-351126

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: Heterogeneous nuclear ribonucleoprotein U

    Participant: Heterogeneous nuclear ribonucleoprotein U

    Accession: EBI-3044169

    Name: EBI-351126

    Stoichiometry: 0.0

    F
    Participant: Heterogeneous nuclear ribonucleoprotein U

    Participant: Heterogeneous nuclear ribonucleoprotein U

    Accession: EBI-3044169

    Name: EBI-351126

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: Heterogeneous nuclear ribonucleoprotein U

    Participant: Heterogeneous nuclear ribonucleoprotein U

    Accession: EBI-3044169

    Name: EBI-351126

    Confidences:

    Type
    Value
    Spectral count =14
    Weighted DNScore =4.11
    14
    4.11
    High


    Graphical Representation of Experimental Features