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What is this view?

Binary interactions

In this tab, we display the list of interactions that you have selected using one of our search features. Despite the fact that our data are annotated to accurately reflect the interactions reported in scientific literature, the data is shown in this view as binary interactions. Whenever the data was reported as a co-complex involving more than two molecules, we store it as such in the IntAct database and post-process it so the portal can show it as binary interaction. This post-processing is the Spoke Expansion model (connects bait to all preys):



sourceExp

At any moment you can choose to display the expansion column in this view in order to see which interaction are spoke expanded and which are not.

Description of what has changed

  • We have added more download options to allow users to retrieve their interaction set using more standard formats such as PSI-MI XML and PSIMITAB (version 2.5, 2.6 or 2.7) but also XGMML, RDF and Biopax (level 2 and 3).
  • We have now four different table views : minimal(molecule names and interaction AC), basic (minimal + molecule links, interaction detection method, negative), standard(minimal + molecule species, confidences, publication details, experiment details), expanded (standard + more experiment details) and complete (all mitab 2.7 columns).

Configuring the view to your need"

In the header of the interaction table you will find a button: ‘Change Column Display’ that will show you all the columns/Table views available and allow you to update the current selected set.

Downloading the data into Standard formats"

In the header of the interaction table you will find a drop down list that contains all the formats currently supported when downloading the interaction data. Select one of them and click the export button next to the list. Please note that PSI-MI XML is only available when the interaction set is no bigger than 1000 interactions.

Opening the interaction details"

Clicking on the magnifying glass in the first column of the interaction table will open the details of the corresponding interaction in the Interaction Details tab, giving you access to more details of the manually curated record.

What is this view?

Browsing (Browse Tab)

This tab is meant to give you access to more content based on the currently selected set of interactions. Please note that linking to third party resources will only include up to 200 molecules , if you exceed this number you will see the warning icon (This number has been reduced to 125 molecules for mRNA expression). Now let’s look at the features available to you:

Limiting the scope of the current dataset with the Uniprot Taxonomy ontology

Allows users to browse the Uniprot Taxonomy hierarchy as a tree and select terms in order to narrow down their dataset. Once a term is selected, you are taken back to the interaction tab to review your dataset.

Limiting the scope of the current dataset with the GO ontology

Allows users to browse the GO hierarchy as a tree and select terms in order to narrow down their dataset. Once a term is selected, you are taken back to the interaction tab to review your dataset.

Limiting the scope of the current dataset with the ChEBI ontology

Allows users to browse the ChEBI hierarchy as a tree and select terms in order to narrow down their dataset. Once a term is selected, you are taken back to the interaction tab to review your dataset.

Bulk linking to third party resources by using involved proteins

  • Proteins by Reactome pathway: Sends your proteins to the Reactome SkyPainter that will show you the pathways in which these molecules are know to play a role.
  • Proteins by Chromosomal location: Sends your list of proteins to Ensembl’s Karyotype viewer and overlays the proteins on the chromosomes.
  • Proteins by mRNA expression: Sends your set of proteins to the ArrayExpress Atlas that will show the known gene expression based on experimental studies.
What is this view?

Searching Interactions (Search Tab)

As you can see in this tab we are now trying to give you more targeted choice to do your queries, please note that the examples provided in this tab are live links so you can simply click them to see the resulting interactions sets.

Using the Quick Search

In this search panel you are free to type anything that might relate to interactions, whether it is properties of their interactor (gene name, identifiers, GO term…) or more specific to the interaction like publication, authors, experimental detection method, ...

Some examples:

  • Try the query: imatinib
    This is a drug for which we have curated a number of interactions.
    Once you press the search button you should be taken to the Interaction Tab that lists 130 binary interactions.
    If you want to construct more complex queries we recommend you take a look at the Molecular Interaction Query Language, accessible from the quick search panel.
  • Try the query: species:yeast AND type:"direct interaction"
    This query selects all interactions involving yeast interactors that have been shown to have direct interactions. If you customize the column display of the interaction tab, you will see that not only “direct interaction” have been selected but also children terms in the PSI-MI ontology.

Using the Ontology Search

Open the Rearch Tab. This panel is specialised to give you an easy access to ontology search. So far you can search on 4 ontologies:

  • Gene Ontology
  • InterPro
  • PSI-MI
  • ChEBI

Whenever you start typing a query in this search panel, the system will search as you type and propose a list of matching controlled vocabulary terms. You can then select one of them and select matching interactions.

For example, type: cancer
You will be presented with a few choices, please note that each term is followed by the count of matching interactions in the IntAct database.

Select a term with the mouse or using the keyboard cursor keys and you will be taken to the interaction tab.

Searching the Compound chemical structure

In this panel you will be able to draw all or part of a chemical structure and search for chemical compounds. If you get any matched, you can then see all interactions involving them.

First you have to open up the chemical search panel so that the applet can load, it might take a few seconds. Then you can start drawing your structure, for instance:

Once you have drawn your structure, select Similarity and press Search. You should be presented with a list of matching compound. Now choose one molecule and click the link: IntAct interactions. You will be taken to the interaction tab to review the data.

Complex Expansion

Binary interactions generated by co-complex expansion

Why should you care about complex expansion ?

Some experimental methods such as Tandem Affinity Purification do generate molecular interactions that can involve more than 2 molecules. Despite the fact that IntAct curation team do capture the molecular interaction as they were reported in the corresponding experiment, when you search using the intact web site, the results of your query is always shown as set of binary interactions (i.e. 2 molecules). We would like to draw your attention on the fact that whenever the reported interaction was a co-complex we do apply an expansion algorithm that transform this n-ary interaction into a set of binary interactions. While none of these agorithms is perfect and will very likely generate some false positive interactions, it is useful to present the data in a consistent manner. Bear in mind that we will strive to differentiate in the search results which interactions are a real experimental binary from expanded ones.

Existing expansion algorithm

There are several known algorithm allowing to transform an n-ary interaction into a set of binaries. The illustration below present the two well known expansion model and illustrates why they can be incorrect.



sourceExp

  • Spoke expansion: Links the bait molecule to all prey molecules. If N is the count of molecule in the complex, it generated N-1 binary interactions.
  • Matrix expansion: Links all molecule to all other molecule present in the complex. If N is the count of molecule in the complex, it generated (N*(N-1))/2 binary interactions.

Now the issue (as illustrated at the bottom right of the diagram above) with these two models lies in the fact that the real complex might not be articulated around the experimental bait but instead, this bait might be linked to a smaller complex, hence most binary interaction generated by spoke and matrix expansion result in false positive.



PSICQUIC

How is the number of interactions in other databases obtained?

PSICQUIC is a standard way to access molecular interaction databases across which it repeats the same query. The number of databases providing data may vary, depending on the status of their services and only those that are active are used in this query. By clicking on the number of interactions you will be redirected to the PSICQUIC View, where you can browse the results in those other resources.

The services currently active are:

Check the PSICQUIC site for more information.

IMEx

What is the significance of the IMEx dataset?"

IMEx is a network of databases which have agreed to supply a non-redundant set of data expertly manually annotated to the same consistent detailed standard which, as such, represents a high-quality subset of the data each individually provides. The number of databases providing data may vary, depending on the status of their services and only those that are active are used in this query. By clicking on the number of interactions you will be redirected to the IMEx View, where you can browse the results in those other resources.

The services currently active are:

Check the IMEx site for more information.

What is this view?

Representation of Experimental Features

This section shows the graphical representation of experimental features, where each participant is represented as a white rectangle with a black border and a line for each hundredth amino acid. All available features are attached to their associated participant and their categories are represented in the right side of the legend. The left side of the legend dynamically shows the range statuses occuring in the shown interaction. These are the possible range statuses:

sourceExp

Interacting with the widget

Hover over a feature to see more information in a tooltip.
sourceExp

To display a single interacting region click on it and click again to display all interacting regions.
Displaying all interacting regionsDisplaying one interacting region
sourceExpsourceExp
What is this view?

Dynamic molecular interaction data

This section shows the graphical representation of dynamic molecular interactions. By default it displays all the interactions from one experiment using radio buttons to allow users to highlight interactions in different variable conditions.

Publication

PubMed Id: 14690591

Journal: Mol. Cell (1097-2765)

Year of Publication: 2003

Title: Assigning function to yeast proteins by integration of technologies.

Author List: Hazbun TR., Malmstrom L., Anderson S., Graczyk BJ., Fox B., Riffle M., Sundin BA., Aranda JD., McDonald WH., Chiu CH., Snydsman BE., Bradley P., Muller EG., Fields S., Baker D., Yates JR., Davis TN.

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-

Experiment (29 interactions)

Accession: EBI-850732

Name: hazbun-2003-3

Host organism: Saccharomyces cerevisiae (Baker's yeast)

Organism: Saccharomyces cerevisiae (Baker's yeast)

Accession: EBI-140

Name: yeasx

Description: Saccharomyces cerevisiae (Baker's yeast)

Cross References:

Database
Identifier
Secondary identifier
Qualifier
yeast
-

Interaction Detection Method: pull down

Interaction detection method: pull down
Accession: EBI-1223

Name: pull down

Description: pull down

Cross References:
Database
Identifier
Secondary identifier
Qualifier
pubmed
14755292
-
primary-reference
psi-mi
MI:0096
-
identity


Annotations:
Topic
Text
definition
A specific affinity chromatography method where a molecule of interest (bait) is bound to a column, often via an affinity tag expressed as a protein fusion (GST, HIS tag and others) or chemically linked to the bait molecule . The molecule may be expressed or synthesised and purified first, often in an heterologous system, bound to the matrix at high concentration and then challenged with a solution or cellular extract containing the candidate partner molecules. Alternatively, a multi-molecular complex may be adsorbed to the resin and the retained binding molecules subsequently identified.


Participant Identification Method: mudpit

Participant identification method: mudpit
Accession: EBI-933988

Name: mudpit

Description: multidimensional protein identification technology

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0658
-
identity
pubmed
11231557
-
primary-reference


Annotations:
Topic
Text
definition
MudPIT is a method for rapid and large-scale protein identification by multidimensional liquid chromatography associated with tandem mass spectrometry. The chromatography step consists of strong cation exchange material back-to-back with reversed phase material inside fused silica capillaries. The peptides bound to the cation-exchange resin are freed by the gradually increasing salt concentration of the buffer and are subsequently retained by the reversed phase resin. Increasing buffers hydrophobicity progressively elute peptides from the reversed phase packing directly into the mass spectrometer. Typically this mass spectrometer will be a tandem electrospray, so peptides undergo ionization in the liquid phase, are separated in a primary mass spectrometer, analysed in the second mass spectrometer and identified.


Cross References:

Database
Identifier
Secondary identifier
Qualifier
-
-

Annotations:

Topic
Text
tdavis@u.washington.edu
100 uncharacterized but essential ORFs of the yeast S. cerevisaie were fused to Gal4 DNA binding domain and tested against a genome-wide two hybrid array.
Proteins were mapped to UniProtKB entries using the ordered-locus name given by the authors. Some ordered-locus names correspond to a common UniProtKB entry as ORFs had been merged. Some ORFs had been deleted from SGD site thus they were not included. The locus history can be found on the SGD web site (http://www.yeastgenome.org/). When the same interaction was found in different screens, the interaction with the highest number of hits was added to the list.
These data are only available at the authors' web site and were not shown in the article. The interactions from these pull-down experiments which were also shown in the article are available in hazbun-2003-2 (EBI-783195).
The following dataset contains a number of proteins which apparently make a high number of interactions and users may wish to filter them out as 'sticky' proteins. Specifically, the following proteins make more than 50 interactions each - P38074 (YBR034C), P38316 (YBR217W), P39081 (YDR228C), Q05583 (YDR267C), P53215 (YGR024C), P14693 (YHR083W), P38829 (YHR122W), Q3E7Z4 (YIL046W), P47088 (YJR013W), Q06411 (YLR424W), Q02159 (YMR022W), P53919 (YNL124W) and Q08273 (YOL133W). This dataset contains data not described in the original publication but which is available at the author's website.
number of hits

Interaction

Accession: EBI-853882

Name: yn53-aof1001

Description: TAP pull-down: bait = YNL313C

Type: association

Interaction type: association
Accession: EBI-1813191

Name: association

Description: association

Cross References:
Database
Identifier
Secondary identifier
Qualifier
pubmed
14755292
-
primary-reference
psi-mi
MI:0914
-
identity


Annotations:
Topic
Text
definition
Interaction between molecules that may participate in formation of one, but possibly more, physical complexes. Often describes a set of molecules that are co-purified in a single pull-down or coimmunoprecipitation but might participate in formation of distinct physical complexes sharing a common bait.


Annotations:

Topic
Text
The participant EBI-6333(P32324) was duplicated. It is posssible that originally this interaction did contain more participants pointing to different Trembl proteins which have been merged to a single swissprot protein later.

Participants (30)

Legend:
A
Annotation and Cross Reference  
P
Experimental Parameter   
S
Stoichiometry   
F
Experimental Feature
C
Participant Confidence
pp12pp
#
Name
Links
Primary Identifier
Aliases
Description
Species
Expression system
Experimental role
Biological role
Interactor type
More...
pp12pp
1
EBI-28374
 logo
N0364
YNL313C
EMW1
Essential for maintenance of the cell wall protein 1
Saccharomyces cerevisiae
Organism Details

Accession: EBI-2935809

Name: yeast

Description: Saccharomyces cerevisiae

Cross References:

Database
Identifier
Secondary identifier
Qualifier
baker's yeast

Expressed In Details

Accession:

Name:

-
bait
Experimental role: bait
Accession: EBI-49

Name: bait

Description: bait

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0496
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally treated to capture its interacting partners.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference
so
SO:0000358
-
see-also


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Essential for maintenance of the cell wall protein 1

Participant: Essential for maintenance of the cell wall protein 1

Accession: EBI-853883

Name: EBI-28374

P
Participant: Essential for maintenance of the cell wall protein 1

Participant: Essential for maintenance of the cell wall protein 1

Accession: EBI-853883

Name: EBI-28374

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Essential for maintenance of the cell wall protein 1

Participant: Essential for maintenance of the cell wall protein 1

Accession: EBI-853883

Name: EBI-28374

Stoichiometry: 0.0

F
Participant: Essential for maintenance of the cell wall protein 1

Participant: Essential for maintenance of the cell wall protein 1

Accession: EBI-853883

Name: EBI-28374

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
region
  • ?-?
  • A
    Feature: EBI-853884

    Feature: region

    Accession: EBI-853884

    Name: region


    C
    Participant: Essential for maintenance of the cell wall protein 1

    Participant: Essential for maintenance of the cell wall protein 1

    Accession: EBI-853883

    Name: EBI-28374

    Confidences:

    Type
    Value
    No records found.

    2
    EBI-2106504
     logo
    TY1B-DR1
    YDRCTy1-1 POL
    Gag-Pol-p199

    [+5]
    Transposon Ty1-DR1 Gag-Pol polyprotein
    Saccharomyces cerevisiae
    Organism Details

    Accession: EBI-2935809

    Name: yeast

    Description: Saccharomyces cerevisiae

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    baker's yeast

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference
    so
    SO:0000358
    -
    see-also


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: Transposon Ty1-DR1 Gag-Pol polyprotein

    Participant: Transposon Ty1-DR1 Gag-Pol polyprotein

    Accession: EBI-2106746

    Name: EBI-2106504

    P
    Participant: Transposon Ty1-DR1 Gag-Pol polyprotein

    Participant: Transposon Ty1-DR1 Gag-Pol polyprotein

    Accession: EBI-2106746

    Name: EBI-2106504

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: Transposon Ty1-DR1 Gag-Pol polyprotein

    Participant: Transposon Ty1-DR1 Gag-Pol polyprotein

    Accession: EBI-2106746

    Name: EBI-2106504

    Stoichiometry: 0.0

    F
    Participant: Transposon Ty1-DR1 Gag-Pol polyprotein

    Participant: Transposon Ty1-DR1 Gag-Pol polyprotein

    Accession: EBI-2106746

    Name: EBI-2106504

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: Transposon Ty1-DR1 Gag-Pol polyprotein

    Participant: Transposon Ty1-DR1 Gag-Pol polyprotein

    Accession: EBI-2106746

    Name: EBI-2106504

    Confidences:

    Type
    Value
    No records found.

    3
    EBI-2106596
     logo
    TY1B-DR5
    YDRWTy1-4 POL
    Gag-Pol-p199

    [+5]
    Transposon Ty1-DR5 Gag-Pol polyprotein
    Saccharomyces cerevisiae
    Organism Details

    Accession: EBI-2935809

    Name: yeast

    Description: Saccharomyces cerevisiae

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    baker's yeast

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference
    so
    SO:0000358
    -
    see-also


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: Transposon Ty1-DR5 Gag-Pol polyprotein

    Participant: Transposon Ty1-DR5 Gag-Pol polyprotein

    Accession: EBI-2106747

    Name: EBI-2106596

    P
    Participant: Transposon Ty1-DR5 Gag-Pol polyprotein

    Participant: Transposon Ty1-DR5 Gag-Pol polyprotein

    Accession: EBI-2106747

    Name: EBI-2106596

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: Transposon Ty1-DR5 Gag-Pol polyprotein

    Participant: Transposon Ty1-DR5 Gag-Pol polyprotein

    Accession: EBI-2106747

    Name: EBI-2106596

    Stoichiometry: 0.0

    F
    Participant: Transposon Ty1-DR5 Gag-Pol polyprotein

    Participant: Transposon Ty1-DR5 Gag-Pol polyprotein

    Accession: EBI-2106747

    Name: EBI-2106596

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: Transposon Ty1-DR5 Gag-Pol polyprotein

    Participant: Transposon Ty1-DR5 Gag-Pol polyprotein

    Accession: EBI-2106747

    Name: EBI-2106596

    Confidences:

    Type
    Value
    No records found.

    4
    EBI-2106566
     logo
    TY1B-DR3
    YDRCTy1-2 POL
    Gag-Pol-p199

    [+5]
    Transposon Ty1-DR3 Gag-Pol polyprotein
    Saccharomyces cerevisiae
    Organism Details

    Accession: EBI-2935809

    Name: yeast

    Description: Saccharomyces cerevisiae

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    baker's yeast

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference
    so
    SO:0000358
    -
    see-also


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: Transposon Ty1-DR3 Gag-Pol polyprotein

    Participant: Transposon Ty1-DR3 Gag-Pol polyprotein

    Accession: EBI-2106748

    Name: EBI-2106566

    P
    Participant: Transposon Ty1-DR3 Gag-Pol polyprotein

    Participant: Transposon Ty1-DR3 Gag-Pol polyprotein

    Accession: EBI-2106748

    Name: EBI-2106566

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: Transposon Ty1-DR3 Gag-Pol polyprotein

    Participant: Transposon Ty1-DR3 Gag-Pol polyprotein

    Accession: EBI-2106748

    Name: EBI-2106566

    Stoichiometry: 0.0

    F
    Participant: Transposon Ty1-DR3 Gag-Pol polyprotein

    Participant: Transposon Ty1-DR3 Gag-Pol polyprotein

    Accession: EBI-2106748

    Name: EBI-2106566

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: Transposon Ty1-DR3 Gag-Pol polyprotein

    Participant: Transposon Ty1-DR3 Gag-Pol polyprotein

    Accession: EBI-2106748

    Name: EBI-2106566

    Confidences:

    Type
    Value
    No records found.

    5
    EBI-2106536
     logo
    TY1B-DR6
    YDRWTy1-5 POL
    Gag-Pol-p199

    [+5]
    Transposon Ty1-DR6 Gag-Pol polyprotein
    Saccharomyces cerevisiae
    Organism Details

    Accession: EBI-2935809

    Name: yeast

    Description: Saccharomyces cerevisiae

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    baker's yeast

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference
    so
    SO:0000358
    -
    see-also


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: Transposon Ty1-DR6 Gag-Pol polyprotein

    Participant: Transposon Ty1-DR6 Gag-Pol polyprotein

    Accession: EBI-2106749

    Name: EBI-2106536

    P
    Participant: Transposon Ty1-DR6 Gag-Pol polyprotein

    Participant: Transposon Ty1-DR6 Gag-Pol polyprotein

    Accession: EBI-2106749

    Name: EBI-2106536

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: Transposon Ty1-DR6 Gag-Pol polyprotein

    Participant: Transposon Ty1-DR6 Gag-Pol polyprotein

    Accession: EBI-2106749

    Name: EBI-2106536

    Stoichiometry: 0.0

    F
    Participant: Transposon Ty1-DR6 Gag-Pol polyprotein

    Participant: Transposon Ty1-DR6 Gag-Pol polyprotein

    Accession: EBI-2106749

    Name: EBI-2106536

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: Transposon Ty1-DR6 Gag-Pol polyprotein

    Participant: Transposon Ty1-DR6 Gag-Pol polyprotein

    Accession: EBI-2106749

    Name: EBI-2106536

    Confidences:

    Type
    Value
    No records found.

    6
    EBI-27414
     logo
    MRPS17
    Mitochondrial small ribosomal subunit protein uS17m
    YM8010.18C

    [+1]
    37S ribosomal protein S17, mitochondrial
    Saccharomyces cerevisiae
    Organism Details

    Accession: EBI-2935809

    Name: yeast

    Description: Saccharomyces cerevisiae

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    baker's yeast

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference
    so
    SO:0000358
    -
    see-also


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: 37S ribosomal protein S17, mitochondrial

    Participant: 37S ribosomal protein S17, mitochondrial

    Accession: EBI-853886

    Name: EBI-27414

    P
    Participant: 37S ribosomal protein S17, mitochondrial

    Participant: 37S ribosomal protein S17, mitochondrial

    Accession: EBI-853886

    Name: EBI-27414

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: 37S ribosomal protein S17, mitochondrial

    Participant: 37S ribosomal protein S17, mitochondrial

    Accession: EBI-853886

    Name: EBI-27414

    Stoichiometry: 0.0

    F
    Participant: 37S ribosomal protein S17, mitochondrial

    Participant: 37S ribosomal protein S17, mitochondrial

    Accession: EBI-853886

    Name: EBI-27414

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: 37S ribosomal protein S17, mitochondrial

    Participant: 37S ribosomal protein S17, mitochondrial

    Accession: EBI-853886

    Name: EBI-27414

    Confidences:

    Type
    Value
    No records found.

    7
    EBI-11178
     logo
    Phosphate transport protein
    J1837
    YJR077C

    [+4]
    Mitochondrial phosphate carrier protein
    Saccharomyces cerevisiae
    Organism Details

    Accession: EBI-2935809

    Name: yeast

    Description: Saccharomyces cerevisiae

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    baker's yeast

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference
    so
    SO:0000358
    -
    see-also


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: Mitochondrial phosphate carrier protein

    Participant: Mitochondrial phosphate carrier protein

    Accession: EBI-853887

    Name: EBI-11178

    P
    Participant: Mitochondrial phosphate carrier protein

    Participant: Mitochondrial phosphate carrier protein

    Accession: EBI-853887

    Name: EBI-11178

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: Mitochondrial phosphate carrier protein

    Participant: Mitochondrial phosphate carrier protein

    Accession: EBI-853887

    Name: EBI-11178

    Stoichiometry: 0.0

    F
    Participant: Mitochondrial phosphate carrier protein

    Participant: Mitochondrial phosphate carrier protein

    Accession: EBI-853887

    Name: EBI-11178

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: Mitochondrial phosphate carrier protein

    Participant: Mitochondrial phosphate carrier protein

    Accession: EBI-853887

    Name: EBI-11178

    Confidences:

    Type
    Value
    No records found.

    8
    EBI-18986
     logo
    YFL037W
    TUB2
    Beta-tubulin
    Tubulin beta chain
    Saccharomyces cerevisiae
    Organism Details

    Accession: EBI-2935809

    Name: yeast

    Description: Saccharomyces cerevisiae

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    baker's yeast

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference
    so
    SO:0000358
    -
    see-also


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: Tubulin beta chain

    Participant: Tubulin beta chain

    Accession: EBI-853888

    Name: EBI-18986

    P
    Participant: Tubulin beta chain

    Participant: Tubulin beta chain

    Accession: EBI-853888

    Name: EBI-18986

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: Tubulin beta chain

    Participant: Tubulin beta chain

    Accession: EBI-853888

    Name: EBI-18986

    Stoichiometry: 0.0

    F
    Participant: Tubulin beta chain

    Participant: Tubulin beta chain

    Accession: EBI-853888

    Name: EBI-18986

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: Tubulin beta chain

    Participant: Tubulin beta chain

    Accession: EBI-853888

    Name: EBI-18986

    Confidences:

    Type
    Value
    No records found.

    9
    EBI-18976
     logo
    YML085C
    TUB1
    Tubulin alpha-1 chain
    Saccharomyces cerevisiae
    Organism Details

    Accession: EBI-2935809

    Name: yeast

    Description: Saccharomyces cerevisiae

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    baker's yeast

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference
    so
    SO:0000358
    -
    see-also


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: Tubulin alpha-1 chain

    Participant: Tubulin alpha-1 chain

    Accession: EBI-853889

    Name: EBI-18976

    P
    Participant: Tubulin alpha-1 chain

    Participant: Tubulin alpha-1 chain

    Accession: EBI-853889

    Name: EBI-18976

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: Tubulin alpha-1 chain

    Participant: Tubulin alpha-1 chain

    Accession: EBI-853889

    Name: EBI-18976

    Stoichiometry: 0.0

    F
    Participant: Tubulin alpha-1 chain

    Participant: Tubulin alpha-1 chain

    Accession: EBI-853889

    Name: EBI-18976

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: Tubulin alpha-1 chain

    Participant: Tubulin alpha-1 chain

    Accession: EBI-853889

    Name: EBI-18976

    Confidences:

    Type
    Value
    No records found.

    10
    EBI-36115
     logo
    RBS1
    D1266
    YDL189W
    RNA-binding suppressor of PAS kinase protein 1
    Saccharomyces cerevisiae
    Organism Details

    Accession: EBI-2935809

    Name: yeast

    Description: Saccharomyces cerevisiae

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    baker's yeast

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference
    so
    SO:0000358
    -
    see-also


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: RNA-binding suppressor of PAS kinase protein 1

    Participant: RNA-binding suppressor of PAS kinase protein 1

    Accession: EBI-853890

    Name: EBI-36115

    P
    Participant: RNA-binding suppressor of PAS kinase protein 1

    Participant: RNA-binding suppressor of PAS kinase protein 1

    Accession: EBI-853890

    Name: EBI-36115

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: RNA-binding suppressor of PAS kinase protein 1

    Participant: RNA-binding suppressor of PAS kinase protein 1

    Accession: EBI-853890

    Name: EBI-36115

    Stoichiometry: 0.0

    F
    Participant: RNA-binding suppressor of PAS kinase protein 1

    Participant: RNA-binding suppressor of PAS kinase protein 1

    Accession: EBI-853890

    Name: EBI-36115

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: RNA-binding suppressor of PAS kinase protein 1

    Participant: RNA-binding suppressor of PAS kinase protein 1

    Accession: EBI-853890

    Name: EBI-36115

    Confidences:

    Type
    Value
    No records found.

    11
    EBI-13320
     logo
    PHO84
    YM7056.03C
    YML123C
    Inorganic phosphate transporter PHO84
    Saccharomyces cerevisiae
    Organism Details

    Accession: EBI-2935809

    Name: yeast

    Description: Saccharomyces cerevisiae

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    baker's yeast

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference
    so
    SO:0000358
    -
    see-also


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: Inorganic phosphate transporter PHO84

    Participant: Inorganic phosphate transporter PHO84

    Accession: EBI-853891

    Name: EBI-13320

    P
    Participant: Inorganic phosphate transporter PHO84

    Participant: Inorganic phosphate transporter PHO84

    Accession: EBI-853891

    Name: EBI-13320

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: Inorganic phosphate transporter PHO84

    Participant: Inorganic phosphate transporter PHO84

    Accession: EBI-853891

    Name: EBI-13320

    Stoichiometry: 0.0

    F
    Participant: Inorganic phosphate transporter PHO84

    Participant: Inorganic phosphate transporter PHO84

    Accession: EBI-853891

    Name: EBI-13320

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: Inorganic phosphate transporter PHO84

    Participant: Inorganic phosphate transporter PHO84

    Accession: EBI-853891

    Name: EBI-13320

    Confidences:

    Type
    Value
    No records found.

    12
    EBI-31733
     logo
    HPF1
    AOF1001
    YOL155C
    Haze protective factor 1
    Saccharomyces cerevisiae
    Organism Details

    Accession: EBI-2935809

    Name: yeast

    Description: Saccharomyces cerevisiae

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    baker's yeast

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference
    so
    SO:0000358
    -
    see-also


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: Haze protective factor 1

    Participant: Haze protective factor 1

    Accession: EBI-853892

    Name: EBI-31733

    P
    Participant: Haze protective factor 1

    Participant: Haze protective factor 1

    Accession: EBI-853892

    Name: EBI-31733

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: Haze protective factor 1

    Participant: Haze protective factor 1

    Accession: EBI-853892

    Name: EBI-31733

    Stoichiometry: 0.0

    F
    Participant: Haze protective factor 1

    Participant: Haze protective factor 1

    Accession: EBI-853892

    Name: EBI-31733

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: Haze protective factor 1

    Participant: Haze protective factor 1

    Accession: EBI-853892

    Name: EBI-31733

    Confidences:

    Type
    Value
    No records found.

    13
    EBI-9166
     logo
    KAP123
    YRB4
    Karyopherin subunit beta-4

    [+4]
    Importin subunit beta-4
    Saccharomyces cerevisiae
    Organism Details

    Accession: EBI-2935809

    Name: yeast

    Description: Saccharomyces cerevisiae

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    baker's yeast

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference
    so
    SO:0000358
    -
    see-also


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: Importin subunit beta-4

    Participant: Importin subunit beta-4

    Accession: EBI-853893

    Name: EBI-9166

    P
    Participant: Importin subunit beta-4

    Participant: Importin subunit beta-4

    Accession: EBI-853893

    Name: EBI-9166

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: Importin subunit beta-4

    Participant: Importin subunit beta-4

    Accession: EBI-853893

    Name: EBI-9166

    Stoichiometry: 0.0

    F
    Participant: Importin subunit beta-4

    Participant: Importin subunit beta-4

    Accession: EBI-853893

    Name: EBI-9166

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: Importin subunit beta-4

    Participant: Importin subunit beta-4

    Accession: EBI-853893

    Name: EBI-9166

    Confidences:

    Type
    Value
    No records found.

    14
    EBI-29278
     logo
    YOL074C
    YOL075C
    Uncharacterized ABC transporter ATP-binding protein/permease YOL075C
    Saccharomyces cerevisiae
    Organism Details

    Accession: EBI-2935809

    Name: yeast

    Description: Saccharomyces cerevisiae

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    baker's yeast

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference
    so
    SO:0000358
    -
    see-also


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: Uncharacterized ABC transporter ATP-binding protein/permease YOL075C

    Participant: Uncharacterized ABC transporter ATP-binding protein/permease YOL075C

    Accession: EBI-853894

    Name: EBI-29278

    P
    Participant: Uncharacterized ABC transporter ATP-binding protein/permease YOL075C

    Participant: Uncharacterized ABC transporter ATP-binding protein/permease YOL075C

    Accession: EBI-853894

    Name: EBI-29278

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: Uncharacterized ABC transporter ATP-binding protein/permease YOL075C

    Participant: Uncharacterized ABC transporter ATP-binding protein/permease YOL075C

    Accession: EBI-853894

    Name: EBI-29278

    Stoichiometry: 0.0

    F
    Participant: Uncharacterized ABC transporter ATP-binding protein/permease YOL075C

    Participant: Uncharacterized ABC transporter ATP-binding protein/permease YOL075C

    Accession: EBI-853894

    Name: EBI-29278

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: Uncharacterized ABC transporter ATP-binding protein/permease YOL075C

    Participant: Uncharacterized ABC transporter ATP-binding protein/permease YOL075C

    Accession: EBI-853894

    Name: EBI-29278

    Confidences:

    Type
    Value
    No records found.

    15
    EBI-33845
     logo
    TY1B
    YAR009C
    Transposon Ty1 TYB polyprotein

    [+2]
    Truncated transposon Ty1-A Gag-Pol polyprotein
    Saccharomyces cerevisiae
    Organism Details

    Accession: EBI-2935809

    Name: yeast

    Description: Saccharomyces cerevisiae

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    baker's yeast

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference
    so
    SO:0000358
    -
    see-also


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: Truncated transposon Ty1-A Gag-Pol polyprotein

    Participant: Truncated transposon Ty1-A Gag-Pol polyprotein

    Accession: EBI-853895

    Name: EBI-33845

    P
    Participant: Truncated transposon Ty1-A Gag-Pol polyprotein

    Participant: Truncated transposon Ty1-A Gag-Pol polyprotein

    Accession: EBI-853895

    Name: EBI-33845

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: Truncated transposon Ty1-A Gag-Pol polyprotein

    Participant: Truncated transposon Ty1-A Gag-Pol polyprotein

    Accession: EBI-853895

    Name: EBI-33845

    Stoichiometry: 0.0

    F
    Participant: Truncated transposon Ty1-A Gag-Pol polyprotein

    Participant: Truncated transposon Ty1-A Gag-Pol polyprotein

    Accession: EBI-853895

    Name: EBI-33845

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: Truncated transposon Ty1-A Gag-Pol polyprotein

    Participant: Truncated transposon Ty1-A Gag-Pol polyprotein

    Accession: EBI-853895

    Name: EBI-33845

    Confidences:

    Type
    Value
    No records found.

    16
    EBI-32751
     logo
    Gag-Pol-p199
    p190
    YHR214C-B

    [+4]
    Transposon Ty1-H Gag-Pol polyprotein
    Saccharomyces cerevisiae
    Organism Details

    Accession: EBI-2935809

    Name: yeast

    Description: Saccharomyces cerevisiae

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    baker's yeast

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference
    so
    SO:0000358
    -
    see-also


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: Transposon Ty1-H Gag-Pol polyprotein

    Participant: Transposon Ty1-H Gag-Pol polyprotein

    Accession: EBI-853896

    Name: EBI-32751

    P
    Participant: Transposon Ty1-H Gag-Pol polyprotein

    Participant: Transposon Ty1-H Gag-Pol polyprotein

    Accession: EBI-853896

    Name: EBI-32751

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: Transposon Ty1-H Gag-Pol polyprotein

    Participant: Transposon Ty1-H Gag-Pol polyprotein

    Accession: EBI-853896

    Name: EBI-32751

    Stoichiometry: 0.0

    F
    Participant: Transposon Ty1-H Gag-Pol polyprotein

    Participant: Transposon Ty1-H Gag-Pol polyprotein

    Accession: EBI-853896

    Name: EBI-32751

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: Transposon Ty1-H Gag-Pol polyprotein

    Participant: Transposon Ty1-H Gag-Pol polyprotein

    Accession: EBI-853896

    Name: EBI-32751

    Confidences:

    Type
    Value
    No records found.

    17
    EBI-36323
     logo
    Gag-Pol-p199
    TY1B-GR3
    p190

    [+5]
    Transposon Ty1-GR3 Gag-Pol polyprotein
    Saccharomyces cerevisiae
    Organism Details

    Accession: EBI-2935809

    Name: yeast

    Description: Saccharomyces cerevisiae

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    baker's yeast

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference
    so
    SO:0000358
    -
    see-also


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: Transposon Ty1-GR3 Gag-Pol polyprotein

    Participant: Transposon Ty1-GR3 Gag-Pol polyprotein

    Accession: EBI-853897

    Name: EBI-36323

    P
    Participant: Transposon Ty1-GR3 Gag-Pol polyprotein

    Participant: Transposon Ty1-GR3 Gag-Pol polyprotein

    Accession: EBI-853897

    Name: EBI-36323

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: Transposon Ty1-GR3 Gag-Pol polyprotein

    Participant: Transposon Ty1-GR3 Gag-Pol polyprotein

    Accession: EBI-853897

    Name: EBI-36323

    Stoichiometry: 0.0

    F
    Participant: Transposon Ty1-GR3 Gag-Pol polyprotein

    Participant: Transposon Ty1-GR3 Gag-Pol polyprotein

    Accession: EBI-853897

    Name: EBI-36323

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: Transposon Ty1-GR3 Gag-Pol polyprotein

    Participant: Transposon Ty1-GR3 Gag-Pol polyprotein

    Accession: EBI-853897

    Name: EBI-36323

    Confidences:

    Type
    Value
    No records found.

    18
    EBI-37330
     logo
    Gag-Pol-p199
    p190
    TY1B-ER2

    [+4]
    Transposon Ty1-ER2 Gag-Pol polyprotein
    Saccharomyces cerevisiae
    Organism Details

    Accession: EBI-2935809

    Name: yeast

    Description: Saccharomyces cerevisiae

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    baker's yeast

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference
    so
    SO:0000358
    -
    see-also


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: Transposon Ty1-ER2 Gag-Pol polyprotein

    Participant: Transposon Ty1-ER2 Gag-Pol polyprotein

    Accession: EBI-853898

    Name: EBI-37330

    P
    Participant: Transposon Ty1-ER2 Gag-Pol polyprotein

    Participant: Transposon Ty1-ER2 Gag-Pol polyprotein

    Accession: EBI-853898

    Name: EBI-37330

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: Transposon Ty1-ER2 Gag-Pol polyprotein

    Participant: Transposon Ty1-ER2 Gag-Pol polyprotein

    Accession: EBI-853898

    Name: EBI-37330

    Stoichiometry: 0.0

    F
    Participant: Transposon Ty1-ER2 Gag-Pol polyprotein

    Participant: Transposon Ty1-ER2 Gag-Pol polyprotein

    Accession: EBI-853898

    Name: EBI-37330

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: Transposon Ty1-ER2 Gag-Pol polyprotein

    Participant: Transposon Ty1-ER2 Gag-Pol polyprotein

    Accession: EBI-853898

    Name: EBI-37330

    Confidences:

    Type
    Value
    No records found.

    19
    EBI-31597
     logo
    p190
    Gag-Pol-p199
    TY1B-ER1

    [+4]
    Transposon Ty1-ER1 Gag-Pol polyprotein
    Saccharomyces cerevisiae
    Organism Details

    Accession: EBI-2935809

    Name: yeast

    Description: Saccharomyces cerevisiae

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    baker's yeast

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference
    so
    SO:0000358
    -
    see-also


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: Transposon Ty1-ER1 Gag-Pol polyprotein

    Participant: Transposon Ty1-ER1 Gag-Pol polyprotein

    Accession: EBI-853899

    Name: EBI-31597

    P
    Participant: Transposon Ty1-ER1 Gag-Pol polyprotein

    Participant: Transposon Ty1-ER1 Gag-Pol polyprotein

    Accession: EBI-853899

    Name: EBI-31597

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: Transposon Ty1-ER1 Gag-Pol polyprotein

    Participant: Transposon Ty1-ER1 Gag-Pol polyprotein

    Accession: EBI-853899

    Name: EBI-31597

    Stoichiometry: 0.0

    F
    Participant: Transposon Ty1-ER1 Gag-Pol polyprotein

    Participant: Transposon Ty1-ER1 Gag-Pol polyprotein

    Accession: EBI-853899

    Name: EBI-31597

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: Transposon Ty1-ER1 Gag-Pol polyprotein

    Participant: Transposon Ty1-ER1 Gag-Pol polyprotein

    Accession: EBI-853899

    Name: EBI-31597

    Confidences:

    Type
    Value
    No records found.

    20
    EBI-38876
     logo
    Gag-Pol-p199
    p190
    TY1B-BR

    [+5]
    Transposon Ty1-BR Gag-Pol polyprotein
    Saccharomyces cerevisiae
    Organism Details

    Accession: EBI-2935809

    Name: yeast

    Description: Saccharomyces cerevisiae

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    baker's yeast

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference
    so
    SO:0000358
    -
    see-also


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: Transposon Ty1-BR Gag-Pol polyprotein

    Participant: Transposon Ty1-BR Gag-Pol polyprotein

    Accession: EBI-853904

    Name: EBI-38876

    P
    Participant: Transposon Ty1-BR Gag-Pol polyprotein

    Participant: Transposon Ty1-BR Gag-Pol polyprotein

    Accession: EBI-853904

    Name: EBI-38876

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: Transposon Ty1-BR Gag-Pol polyprotein

    Participant: Transposon Ty1-BR Gag-Pol polyprotein

    Accession: EBI-853904

    Name: EBI-38876

    Stoichiometry: 0.0

    F
    Participant: Transposon Ty1-BR Gag-Pol polyprotein

    Participant: Transposon Ty1-BR Gag-Pol polyprotein

    Accession: EBI-853904

    Name: EBI-38876

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: Transposon Ty1-BR Gag-Pol polyprotein

    Participant: Transposon Ty1-BR Gag-Pol polyprotein

    Accession: EBI-853904

    Name: EBI-38876

    Confidences:

    Type
    Value
    No records found.


    Graphical Representation of Experimental Features