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What is this view?

Binary interactions

In this tab, we display the list of interactions that you have selected using one of our search features. Despite the fact that our data are annotated to accurately reflect the interactions reported in scientific literature, the data is shown in this view as binary interactions. Whenever the data was reported as a co-complex involving more than two molecules, we store it as such in the IntAct database and post-process it so the portal can show it as binary interaction. This post-processing is the Spoke Expansion model (connects bait to all preys):



sourceExp

At any moment you can choose to display the expansion column in this view in order to see which interaction are spoke expanded and which are not.

Description of what has changed

  • We have added more download options to allow users to retrieve their interaction set using more standard formats such as PSI-MI XML and PSIMITAB (version 2.5, 2.6 or 2.7) but also XGMML, RDF and Biopax (level 2 and 3).
  • We have now four different table views : minimal(molecule names and interaction AC), basic (minimal + molecule links, interaction detection method, negative), standard(minimal + molecule species, confidences, publication details, experiment details), expanded (standard + more experiment details) and complete (all mitab 2.7 columns).

Configuring the view to your need"

In the header of the interaction table you will find a button: ‘Change Column Display’ that will show you all the columns/Table views available and allow you to update the current selected set.

Downloading the data into Standard formats"

In the header of the interaction table you will find a drop down list that contains all the formats currently supported when downloading the interaction data. Select one of them and click the export button next to the list. Please note that PSI-MI XML is only available when the interaction set is no bigger than 1000 interactions.

Opening the interaction details"

Clicking on the magnifying glass in the first column of the interaction table will open the details of the corresponding interaction in the Interaction Details tab, giving you access to more details of the manually curated record.

What is this view?

Browsing (Browse Tab)

This tab is meant to give you access to more content based on the currently selected set of interactions. Please note that linking to third party resources will only include up to 200 molecules , if you exceed this number you will see the warning icon (This number has been reduced to 125 molecules for mRNA expression). Now let’s look at the features available to you:

Limiting the scope of the current dataset with the Uniprot Taxonomy ontology

Allows users to browse the Uniprot Taxonomy hierarchy as a tree and select terms in order to narrow down their dataset. Once a term is selected, you are taken back to the interaction tab to review your dataset.

Limiting the scope of the current dataset with the GO ontology

Allows users to browse the GO hierarchy as a tree and select terms in order to narrow down their dataset. Once a term is selected, you are taken back to the interaction tab to review your dataset.

Limiting the scope of the current dataset with the ChEBI ontology

Allows users to browse the ChEBI hierarchy as a tree and select terms in order to narrow down their dataset. Once a term is selected, you are taken back to the interaction tab to review your dataset.

Bulk linking to third party resources by using involved proteins

  • Proteins by Reactome pathway: Sends your proteins to the Reactome SkyPainter that will show you the pathways in which these molecules are know to play a role.
  • Proteins by Chromosomal location: Sends your list of proteins to Ensembl’s Karyotype viewer and overlays the proteins on the chromosomes.
  • Proteins by mRNA expression: Sends your set of proteins to the ArrayExpress Atlas that will show the known gene expression based on experimental studies.
What is this view?

Searching Interactions (Search Tab)

As you can see in this tab we are now trying to give you more targeted choice to do your queries, please note that the examples provided in this tab are live links so you can simply click them to see the resulting interactions sets.

Using the Quick Search

In this search panel you are free to type anything that might relate to interactions, whether it is properties of their interactor (gene name, identifiers, GO term…) or more specific to the interaction like publication, authors, experimental detection method, ...

Some examples:

  • Try the query: imatinib
    This is a drug for which we have curated a number of interactions.
    Once you press the search button you should be taken to the Interaction Tab that lists 130 binary interactions.
    If you want to construct more complex queries we recommend you take a look at the Molecular Interaction Query Language, accessible from the quick search panel.
  • Try the query: species:yeast AND type:"direct interaction"
    This query selects all interactions involving yeast interactors that have been shown to have direct interactions. If you customize the column display of the interaction tab, you will see that not only “direct interaction” have been selected but also children terms in the PSI-MI ontology.

Using the Ontology Search

Open the Rearch Tab. This panel is specialised to give you an easy access to ontology search. So far you can search on 4 ontologies:

  • Gene Ontology
  • InterPro
  • PSI-MI
  • ChEBI

Whenever you start typing a query in this search panel, the system will search as you type and propose a list of matching controlled vocabulary terms. You can then select one of them and select matching interactions.

For example, type: cancer
You will be presented with a few choices, please note that each term is followed by the count of matching interactions in the IntAct database.

Select a term with the mouse or using the keyboard cursor keys and you will be taken to the interaction tab.

Searching the Compound chemical structure

In this panel you will be able to draw all or part of a chemical structure and search for chemical compounds. If you get any matched, you can then see all interactions involving them.

First you have to open up the chemical search panel so that the applet can load, it might take a few seconds. Then you can start drawing your structure, for instance:

Once you have drawn your structure, select Similarity and press Search. You should be presented with a list of matching compound. Now choose one molecule and click the link: IntAct interactions. You will be taken to the interaction tab to review the data.

Complex Expansion

Binary interactions generated by co-complex expansion

Why should you care about complex expansion ?

Some experimental methods such as Tandem Affinity Purification do generate molecular interactions that can involve more than 2 molecules. Despite the fact that IntAct curation team do capture the molecular interaction as they were reported in the corresponding experiment, when you search using the intact web site, the results of your query is always shown as set of binary interactions (i.e. 2 molecules). We would like to draw your attention on the fact that whenever the reported interaction was a co-complex we do apply an expansion algorithm that transform this n-ary interaction into a set of binary interactions. While none of these agorithms is perfect and will very likely generate some false positive interactions, it is useful to present the data in a consistent manner. Bear in mind that we will strive to differentiate in the search results which interactions are a real experimental binary from expanded ones.

Existing expansion algorithm

There are several known algorithm allowing to transform an n-ary interaction into a set of binaries. The illustration below present the two well known expansion model and illustrates why they can be incorrect.



sourceExp

  • Spoke expansion: Links the bait molecule to all prey molecules. If N is the count of molecule in the complex, it generated N-1 binary interactions.
  • Matrix expansion: Links all molecule to all other molecule present in the complex. If N is the count of molecule in the complex, it generated (N*(N-1))/2 binary interactions.

Now the issue (as illustrated at the bottom right of the diagram above) with these two models lies in the fact that the real complex might not be articulated around the experimental bait but instead, this bait might be linked to a smaller complex, hence most binary interaction generated by spoke and matrix expansion result in false positive.



PSICQUIC

How is the number of interactions in other databases obtained?

PSICQUIC is a standard way to access molecular interaction databases across which it repeats the same query. The number of databases providing data may vary, depending on the status of their services and only those that are active are used in this query. By clicking on the number of interactions you will be redirected to the PSICQUIC View, where you can browse the results in those other resources.

The services currently active are:

Check the PSICQUIC site for more information.

IMEx

What is the significance of the IMEx dataset?"

IMEx is a network of databases which have agreed to supply a non-redundant set of data expertly manually annotated to the same consistent detailed standard which, as such, represents a high-quality subset of the data each individually provides. The number of databases providing data may vary, depending on the status of their services and only those that are active are used in this query. By clicking on the number of interactions you will be redirected to the IMEx View, where you can browse the results in those other resources.

The services currently active are:

Check the IMEx site for more information.

What is this view?

Representation of Experimental Features

This section shows the graphical representation of experimental features, where each participant is represented as a white rectangle with a black border and a line for each hundredth amino acid. All available features are attached to their associated participant and their categories are represented in the right side of the legend. The left side of the legend dynamically shows the range statuses occuring in the shown interaction. These are the possible range statuses:

sourceExp

Interacting with the widget

Hover over a feature to see more information in a tooltip.
sourceExp

To display a single interacting region click on it and click again to display all interacting regions.
Displaying all interacting regionsDisplaying one interacting region
sourceExpsourceExp
What is this view?

Dynamic molecular interaction data

This section shows the graphical representation of dynamic molecular interactions. By default it displays all the interactions from one experiment using radio buttons to allow users to highlight interactions in different variable conditions.

Publication

PubMed Id: 22190034

Journal: Nature (0028-0836)

Year of Publication: 2012

Title: Global landscape of HIV-human protein complexes.

Author List: Jager S., Cimermancic P., Gulbahce N., Johnson J.R., McGovern K.E., Clarke S.C., Shales M., Mercenne G., Pache L., Li K., Hernandez H., Jang G.M., Roth S.L., Akiva E., Marlett J., Stephens M., D'Orso I., Fernandes J., Fahey M., Mahon C., O'Donoghue A.J., Todorovic A., Morris J.H., Maltby D.A., Alber T., Cagney G., Bushman F.D., Young J.A., Chanda S.K., Sundquist W.I., Kortemme T., Hernandez R.D., Craik C.S., Burlingame A., Sali A., Frankel A.D., Krogan N.J.

Cross References:

Annotations:

Topic
Text
Virus - Publications including interactions involving viral proteins

Experiment (16 interactions)

Accession: EBI-6174205

Name: jager-2012-1

Host organism: Homo sapiens transformed primary embryonal kidney cells

Organism: Homo sapiens transformed primary embryonal kidney cells

Accession: EBI-307628

Name: human-293

Description: Homo sapiens transformed primary embryonal kidney cells

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-
human
-

Interaction Detection Method: anti tag coip

Interaction detection method: anti tag coip
Accession: EBI-90

Name: anti tag coip

Description: anti tag coimmunoprecipitation

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0007
-
identity
pubmed
7708014
-
primary-reference


Annotations:
Topic
Text
definition
A specific antibody for the molecule of interest is not available, therefore the bait protein is expressed as a hybrid protein fused to a tag peptide/protein for which efficient and specific antibodies or a specific ligand are available.


Participant Identification Method: sequence tag

Participant identification method: sequence tag
Accession: EBI-81

Name: sequence tag

Description: sequence tag identification

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0102
-
identity
pubmed
10967324
-
primary-reference
pubmed
11752590
-
primary-reference
pubmed
11805837
-
primary-reference


Annotations:
Topic
Text
definition
This approach leads to protein identification by combining mass measurement and short amino acid sequence information obtained by tandem mass spectrometry. This information is then used to automatically find the best match in a sequence database. A mixture of peptides derived from a protease digestion is analysed by nanoelectrospray LC-MS/MS (Liquid Chromatography Tandem Mass Spectrometer or nanoESI MS/MS) mass spectrometry. Electrospray mass spectrometry cannot be applied to dilute samples and is affected by high salt. As a consequence peptides, normally extracted from acrylamide gels by in situ proteolysis, are desalted and concentrated on a microcolumn followed by elution into a capillary used for nanoelectrospray tandem mass spectrometry. A first mass spectrum (Normal mass spectrum or Q1 mass spectrum) gives information about the masses of all the peptides. Peptides observed in the normal mass spectrum are isolated in turn and dissociated into fragments by collision with gas molecules within the mass spectrometer. Some of the fragments obtained from a peptide constitute a nested set, differing by one amino acid, and the mass difference between them allows assignment of a partial sequence. The masses of the fragments define the position of the partial sequence in the peptide. Together with the cleavage specificity of the protease used to cleave the protein, and mass information such sequence tag provides much higher search specificity to match the a database entry. The procedure is repeated with several peptides from the digest, resulting in multiple identifications of the same protein or identification of several proteins from the peptide mixture. Unknown proteins can easily be identified by using the high specificity of the peptide sequence tag for searches in most sequence databases including EST or genome databases.


Cross References:

Annotations:

Topic
Text
krogan@cmp.ucsf.edu
imex curation
Only protein-protein interactions
-
The number of interactions found in the paper following the author's cut-off values is different from the one they give in the text. The authors were contacted to clarify this, but no answer was received.

Interaction

Accession: EBI-6175137

Name: p12504-p11441

Description: -

Type: association

Interaction type: association
Accession: EBI-1813191

Name: association

Description: association

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0914
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Interaction between molecules that may participate in formation of one, but possibly more, physical complexes. Often describes a set of molecules that are co-purified in a single pull-down or coimmunoprecipitation but might participate in formation of distinct physical complexes sharing a common bait.


Cross References:

Database
Identifier
Secondary identifier
Qualifier
-
-

Annotations:

Topic
Text
suppl. data 1

Participants (18)

Legend:
A
Annotation and Cross Reference  
P
Experimental Parameter   
S
Stoichiometry   
F
Experimental Feature
C
Participant Confidence
#
Name
Links
Primary Identifier
Aliases
Description
Species
Expression system
Experimental role
Biological role
Interactor type
More...
1
EBI-779991
 logo
SOR protein
vif
Virion infectivity factor
Human immunodeficiency virus type 1 group M subtype B (isolate NY5) (HIV-1)
Organism Details

Accession: EBI-779990

Name: hv1n5

Description: Human immunodeficiency virus type 1 group M subtype B (isolate NY5) (HIV-1)

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-

Expressed In Details

Accession:

Name:

-
bait
Experimental role: bait
Accession: EBI-49

Name: bait

Description: bait

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0496
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally treated to capture its interacting partners.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Virion infectivity factor

Participant: Virion infectivity factor

Accession: EBI-6175155

Name: EBI-779991

P
Participant: Virion infectivity factor

Participant: Virion infectivity factor

Accession: EBI-6175155

Name: EBI-779991

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Virion infectivity factor

Participant: Virion infectivity factor

Accession: EBI-6175155

Name: EBI-779991

Stoichiometry: 0.0

F
Participant: Virion infectivity factor

Participant: Virion infectivity factor

Accession: EBI-6175155

Name: EBI-779991

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
strepii+flag tag
  • c-c
  • A
    Feature: EBI-6175193

    Feature: strepii+flag tag

    Accession: EBI-6175193

    Name: strepii+flag tag

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    -


    C
    Participant: Virion infectivity factor

    Participant: Virion infectivity factor

    Accession: EBI-6175155

    Name: EBI-779991

    Confidences:

    Type
    Value
    No records found.

    2
    EBI-1057139
     logo
    CUL5
    VACM1
    Vasopressin-activated calcium-mobilizing receptor 1
    Cullin-5
    Homo sapiens
    Organism Details

    Accession: EBI-874

    Name: human

    Description: Homo sapiens

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    human

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    so
    SO:0000358
    -
    see-also
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: Cullin-5

    Participant: Cullin-5

    Accession: EBI-6175140

    Name: EBI-1057139

    Annotations:

    Topic
    Text
    0.85

    P
    Participant: Cullin-5

    Participant: Cullin-5

    Accession: EBI-6175140

    Name: EBI-1057139

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: Cullin-5

    Participant: Cullin-5

    Accession: EBI-6175140

    Name: EBI-1057139

    Stoichiometry: 0.0

    F
    Participant: Cullin-5

    Participant: Cullin-5

    Accession: EBI-6175140

    Name: EBI-1057139

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: Cullin-5

    Participant: Cullin-5

    Accession: EBI-6175140

    Name: EBI-1057139

    Confidences:

    Type
    Value
    No records found.

    3
    EBI-347552
     logo
    BAT3
    G3
    HLA-B-associated transcript 3

    [+5]
    Large proline-rich protein BAG6
    Homo sapiens
    Organism Details

    Accession: EBI-874

    Name: human

    Description: Homo sapiens

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    human

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    so
    SO:0000358
    -
    see-also
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: Large proline-rich protein BAG6

    Participant: Large proline-rich protein BAG6

    Accession: EBI-6175143

    Name: EBI-347552

    Annotations:

    Topic
    Text
    0.78

    P
    Participant: Large proline-rich protein BAG6

    Participant: Large proline-rich protein BAG6

    Accession: EBI-6175143

    Name: EBI-347552

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: Large proline-rich protein BAG6

    Participant: Large proline-rich protein BAG6

    Accession: EBI-6175143

    Name: EBI-347552

    Stoichiometry: 0.0

    F
    Participant: Large proline-rich protein BAG6

    Participant: Large proline-rich protein BAG6

    Accession: EBI-6175143

    Name: EBI-347552

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: Large proline-rich protein BAG6

    Participant: Large proline-rich protein BAG6

    Accession: EBI-6175143

    Name: EBI-347552

    Confidences:

    Type
    Value
    No records found.

    4
    EBI-625934
     logo
    HECT, UBA and WWE domain-containing protein 1
    Upstream regulatory element-binding protein 1
    Mcl-1 ubiquitin ligase E3

    [+9]
    E3 ubiquitin-protein ligase HUWE1
    Homo sapiens
    Organism Details

    Accession: EBI-874

    Name: human

    Description: Homo sapiens

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    human

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    so
    SO:0000358
    -
    see-also
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: E3 ubiquitin-protein ligase HUWE1

    Participant: E3 ubiquitin-protein ligase HUWE1

    Accession: EBI-6175146

    Name: EBI-625934

    Annotations:

    Topic
    Text
    0.93

    P
    Participant: E3 ubiquitin-protein ligase HUWE1

    Participant: E3 ubiquitin-protein ligase HUWE1

    Accession: EBI-6175146

    Name: EBI-625934

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: E3 ubiquitin-protein ligase HUWE1

    Participant: E3 ubiquitin-protein ligase HUWE1

    Accession: EBI-6175146

    Name: EBI-625934

    Stoichiometry: 0.0

    F
    Participant: E3 ubiquitin-protein ligase HUWE1

    Participant: E3 ubiquitin-protein ligase HUWE1

    Accession: EBI-6175146

    Name: EBI-625934

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: E3 ubiquitin-protein ligase HUWE1

    Participant: E3 ubiquitin-protein ligase HUWE1

    Accession: EBI-6175146

    Name: EBI-625934

    Confidences:

    Type
    Value
    No records found.

    5
    EBI-357530
     logo
    AKAP8L
    HRIHFB2018
    NAKAP95

    [+4]
    A-kinase anchor protein 8-like
    Homo sapiens
    Organism Details

    Accession: EBI-874

    Name: human

    Description: Homo sapiens

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    human

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    so
    SO:0000358
    -
    see-also
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: A-kinase anchor protein 8-like

    Participant: A-kinase anchor protein 8-like

    Accession: EBI-6175149

    Name: EBI-357530

    Annotations:

    Topic
    Text
    0.78

    P
    Participant: A-kinase anchor protein 8-like

    Participant: A-kinase anchor protein 8-like

    Accession: EBI-6175149

    Name: EBI-357530

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: A-kinase anchor protein 8-like

    Participant: A-kinase anchor protein 8-like

    Accession: EBI-6175149

    Name: EBI-357530

    Stoichiometry: 0.0

    F
    Participant: A-kinase anchor protein 8-like

    Participant: A-kinase anchor protein 8-like

    Accession: EBI-6175149

    Name: EBI-357530

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: A-kinase anchor protein 8-like

    Participant: A-kinase anchor protein 8-like

    Accession: EBI-6175149

    Name: EBI-357530

    Confidences:

    Type
    Value
    No records found.

    6
    EBI-711823
     logo
    CEE
    Conserved edge-expressed protein
    GET4

    [+4]
    Golgi to ER traffic protein 4 homolog
    Homo sapiens
    Organism Details

    Accession: EBI-874

    Name: human

    Description: Homo sapiens

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    human

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    so
    SO:0000358
    -
    see-also
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: Golgi to ER traffic protein 4 homolog

    Participant: Golgi to ER traffic protein 4 homolog

    Accession: EBI-6175152

    Name: EBI-711823

    Annotations:

    Topic
    Text
    0.74

    P
    Participant: Golgi to ER traffic protein 4 homolog

    Participant: Golgi to ER traffic protein 4 homolog

    Accession: EBI-6175152

    Name: EBI-711823

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: Golgi to ER traffic protein 4 homolog

    Participant: Golgi to ER traffic protein 4 homolog

    Accession: EBI-6175152

    Name: EBI-711823

    Stoichiometry: 0.0

    F
    Participant: Golgi to ER traffic protein 4 homolog

    Participant: Golgi to ER traffic protein 4 homolog

    Accession: EBI-6175152

    Name: EBI-711823

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: Golgi to ER traffic protein 4 homolog

    Participant: Golgi to ER traffic protein 4 homolog

    Accession: EBI-6175152

    Name: EBI-711823

    Confidences:

    Type
    Value
    No records found.

    7
    EBI-718750
     logo
    Polyomavirus enhancer-binding protein 2 beta subunit
    SL3-3 enhancer factor 1 subunit beta
    SL3/AKV core-binding factor beta subunit

    [+1]
    Core-binding factor subunit beta
    Homo sapiens
    Organism Details

    Accession: EBI-874

    Name: human

    Description: Homo sapiens

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    human

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    so
    SO:0000358
    -
    see-also
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: Core-binding factor subunit beta

    Participant: Core-binding factor subunit beta

    Accession: EBI-6175157

    Name: EBI-718750

    Annotations:

    Topic
    Text
    0.91

    P
    Participant: Core-binding factor subunit beta

    Participant: Core-binding factor subunit beta

    Accession: EBI-6175157

    Name: EBI-718750

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: Core-binding factor subunit beta

    Participant: Core-binding factor subunit beta

    Accession: EBI-6175157

    Name: EBI-718750

    Stoichiometry: 0.0

    F
    Participant: Core-binding factor subunit beta

    Participant: Core-binding factor subunit beta

    Accession: EBI-6175157

    Name: EBI-718750

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: Core-binding factor subunit beta

    Participant: Core-binding factor subunit beta

    Accession: EBI-6175157

    Name: EBI-718750

    Confidences:

    Type
    Value
    No records found.

    8
    EBI-301238
     logo
    ELOB
    Elongin 18 kDa subunit
    RNA polymerase II transcription factor SIII subunit B

    [+3]
    Elongin-B
    Homo sapiens
    Organism Details

    Accession: EBI-874

    Name: human

    Description: Homo sapiens

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    human

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    so
    SO:0000358
    -
    see-also
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: Elongin-B

    Participant: Elongin-B

    Accession: EBI-6175160

    Name: EBI-301238

    Annotations:

    Topic
    Text
    0.96

    P
    Participant: Elongin-B

    Participant: Elongin-B

    Accession: EBI-6175160

    Name: EBI-301238

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: Elongin-B

    Participant: Elongin-B

    Accession: EBI-6175160

    Name: EBI-301238

    Stoichiometry: 0.0

    F
    Participant: Elongin-B

    Participant: Elongin-B

    Accession: EBI-6175160

    Name: EBI-301238

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: Elongin-B

    Participant: Elongin-B

    Accession: EBI-6175160

    Name: EBI-301238

    Confidences:

    Type
    Value
    No records found.

    9
    EBI-1237260
     logo
    UBR2
    C6orf133
    KIAA0349

    [+4]
    E3 ubiquitin-protein ligase UBR2
    Homo sapiens
    Organism Details

    Accession: EBI-874

    Name: human

    Description: Homo sapiens

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    human

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    so
    SO:0000358
    -
    see-also
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: E3 ubiquitin-protein ligase UBR2

    Participant: E3 ubiquitin-protein ligase UBR2

    Accession: EBI-6175163

    Name: EBI-1237260

    Annotations:

    Topic
    Text
    0.91

    P
    Participant: E3 ubiquitin-protein ligase UBR2

    Participant: E3 ubiquitin-protein ligase UBR2

    Accession: EBI-6175163

    Name: EBI-1237260

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: E3 ubiquitin-protein ligase UBR2

    Participant: E3 ubiquitin-protein ligase UBR2

    Accession: EBI-6175163

    Name: EBI-1237260

    Stoichiometry: 0.0

    F
    Participant: E3 ubiquitin-protein ligase UBR2

    Participant: E3 ubiquitin-protein ligase UBR2

    Accession: EBI-6175163

    Name: EBI-1237260

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: E3 ubiquitin-protein ligase UBR2

    Participant: E3 ubiquitin-protein ligase UBR2

    Accession: EBI-6175163

    Name: EBI-1237260

    Confidences:

    Type
    Value
    No records found.

    10
    EBI-307104
     logo
    SQSTM1
    ORCA
    OSIL

    [+3]
    Sequestosome-1
    Homo sapiens
    Organism Details

    Accession: EBI-874

    Name: human

    Description: Homo sapiens

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    human

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    so
    SO:0000358
    -
    see-also
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: Sequestosome-1

    Participant: Sequestosome-1

    Accession: EBI-6175166

    Name: EBI-307104

    Annotations:

    Topic
    Text
    0.79

    P
    Participant: Sequestosome-1

    Participant: Sequestosome-1

    Accession: EBI-6175166

    Name: EBI-307104

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: Sequestosome-1

    Participant: Sequestosome-1

    Accession: EBI-6175166

    Name: EBI-307104

    Stoichiometry: 0.0

    F
    Participant: Sequestosome-1

    Participant: Sequestosome-1

    Accession: EBI-6175166

    Name: EBI-307104

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: Sequestosome-1

    Participant: Sequestosome-1

    Accession: EBI-6175166

    Name: EBI-307104

    Confidences:

    Type
    Value
    No records found.

    11
    EBI-357552
     logo
    DNAJC7
    TPR2
    TTC2

    [+1]
    DnaJ homolog subfamily C member 7
    Homo sapiens
    Organism Details

    Accession: EBI-874

    Name: human

    Description: Homo sapiens

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    human

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    so
    SO:0000358
    -
    see-also
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: DnaJ homolog subfamily C member 7

    Participant: DnaJ homolog subfamily C member 7

    Accession: EBI-6175169

    Name: EBI-357552

    Annotations:

    Topic
    Text
    0.89

    P
    Participant: DnaJ homolog subfamily C member 7

    Participant: DnaJ homolog subfamily C member 7

    Accession: EBI-6175169

    Name: EBI-357552

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: DnaJ homolog subfamily C member 7

    Participant: DnaJ homolog subfamily C member 7

    Accession: EBI-6175169

    Name: EBI-357552

    Stoichiometry: 0.0

    F
    Participant: DnaJ homolog subfamily C member 7

    Participant: DnaJ homolog subfamily C member 7

    Accession: EBI-6175169

    Name: EBI-357552

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: DnaJ homolog subfamily C member 7

    Participant: DnaJ homolog subfamily C member 7

    Accession: EBI-6175169

    Name: EBI-357552

    Confidences:

    Type
    Value
    No records found.

    12
    EBI-2512975
     logo
    AMBRA1
    KIAA1736
    Activating molecule in BECN1-regulated autophagy protein 1
    Homo sapiens
    Organism Details

    Accession: EBI-874

    Name: human

    Description: Homo sapiens

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    human

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    so
    SO:0000358
    -
    see-also
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: Activating molecule in BECN1-regulated autophagy protein 1

    Participant: Activating molecule in BECN1-regulated autophagy protein 1

    Accession: EBI-6175172

    Name: EBI-2512975

    Annotations:

    Topic
    Text
    0.83

    P
    Participant: Activating molecule in BECN1-regulated autophagy protein 1

    Participant: Activating molecule in BECN1-regulated autophagy protein 1

    Accession: EBI-6175172

    Name: EBI-2512975

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: Activating molecule in BECN1-regulated autophagy protein 1

    Participant: Activating molecule in BECN1-regulated autophagy protein 1

    Accession: EBI-6175172

    Name: EBI-2512975

    Stoichiometry: 0.0

    F
    Participant: Activating molecule in BECN1-regulated autophagy protein 1

    Participant: Activating molecule in BECN1-regulated autophagy protein 1

    Accession: EBI-6175172

    Name: EBI-2512975

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: Activating molecule in BECN1-regulated autophagy protein 1

    Participant: Activating molecule in BECN1-regulated autophagy protein 1

    Accession: EBI-6175172

    Name: EBI-2512975

    Confidences:

    Type
    Value
    No records found.

    13
    EBI-357085
     logo
    CHIP
    STUB1
    PP1131

    [+5]
    E3 ubiquitin-protein ligase CHIP
    Homo sapiens
    Organism Details

    Accession: EBI-874

    Name: human

    Description: Homo sapiens

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    human

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    so
    SO:0000358
    -
    see-also
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: E3 ubiquitin-protein ligase CHIP

    Participant: E3 ubiquitin-protein ligase CHIP

    Accession: EBI-6175175

    Name: EBI-357085

    Annotations:

    Topic
    Text
    0.87

    P
    Participant: E3 ubiquitin-protein ligase CHIP

    Participant: E3 ubiquitin-protein ligase CHIP

    Accession: EBI-6175175

    Name: EBI-357085

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: E3 ubiquitin-protein ligase CHIP

    Participant: E3 ubiquitin-protein ligase CHIP

    Accession: EBI-6175175

    Name: EBI-357085

    Stoichiometry: 0.0

    F
    Participant: E3 ubiquitin-protein ligase CHIP

    Participant: E3 ubiquitin-protein ligase CHIP

    Accession: EBI-6175175

    Name: EBI-357085

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: E3 ubiquitin-protein ligase CHIP

    Participant: E3 ubiquitin-protein ligase CHIP

    Accession: EBI-6175175

    Name: EBI-357085

    Confidences:

    Type
    Value
    No records found.

    14
    EBI-356983
     logo
    UBL4A
    GDX
    DXS254E

    [+2]
    Ubiquitin-like protein 4A
    Homo sapiens
    Organism Details

    Accession: EBI-874

    Name: human

    Description: Homo sapiens

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    human

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    so
    SO:0000358
    -
    see-also
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: Ubiquitin-like protein 4A

    Participant: Ubiquitin-like protein 4A

    Accession: EBI-6175178

    Name: EBI-356983

    Annotations:

    Topic
    Text
    0.76

    P
    Participant: Ubiquitin-like protein 4A

    Participant: Ubiquitin-like protein 4A

    Accession: EBI-6175178

    Name: EBI-356983

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: Ubiquitin-like protein 4A

    Participant: Ubiquitin-like protein 4A

    Accession: EBI-6175178

    Name: EBI-356983

    Stoichiometry: 0.0

    F
    Participant: Ubiquitin-like protein 4A

    Participant: Ubiquitin-like protein 4A

    Accession: EBI-6175178

    Name: EBI-356983

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: Ubiquitin-like protein 4A

    Participant: Ubiquitin-like protein 4A

    Accession: EBI-6175178

    Name: EBI-356983

    Confidences:

    Type
    Value
    No records found.

    15
    EBI-355546
     logo
    PSME3
    Proteasome activator 28 subunit gamma
    Activator of multicatalytic protease subunit 3

    [+2]
    Proteasome activator complex subunit 3
    Homo sapiens
    Organism Details

    Accession: EBI-874

    Name: human

    Description: Homo sapiens

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    human

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    so
    SO:0000358
    -
    see-also
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: Proteasome activator complex subunit 3

    Participant: Proteasome activator complex subunit 3

    Accession: EBI-6175181

    Name: EBI-355546

    Annotations:

    Topic
    Text
    0.84

    P
    Participant: Proteasome activator complex subunit 3

    Participant: Proteasome activator complex subunit 3

    Accession: EBI-6175181

    Name: EBI-355546

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: Proteasome activator complex subunit 3

    Participant: Proteasome activator complex subunit 3

    Accession: EBI-6175181

    Name: EBI-355546

    Stoichiometry: 0.0

    F
    Participant: Proteasome activator complex subunit 3

    Participant: Proteasome activator complex subunit 3

    Accession: EBI-6175181

    Name: EBI-355546

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: Proteasome activator complex subunit 3

    Participant: Proteasome activator complex subunit 3

    Accession: EBI-6175181

    Name: EBI-355546

    Confidences:

    Type
    Value
    No records found.

    16
    EBI-398632
     logo
    RNF7
    RBX2
    ROC2

    [+5]
    RING-box protein 2
    Homo sapiens
    Organism Details

    Accession: EBI-874

    Name: human

    Description: Homo sapiens

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    human

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    so
    SO:0000358
    -
    see-also
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: RING-box protein 2

    Participant: RING-box protein 2

    Accession: EBI-6175184

    Name: EBI-398632

    Annotations:

    Topic
    Text
    0.85

    P
    Participant: RING-box protein 2

    Participant: RING-box protein 2

    Accession: EBI-6175184

    Name: EBI-398632

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: RING-box protein 2

    Participant: RING-box protein 2

    Accession: EBI-6175184

    Name: EBI-398632

    Stoichiometry: 0.0

    F
    Participant: RING-box protein 2

    Participant: RING-box protein 2

    Accession: EBI-6175184

    Name: EBI-398632

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: RING-box protein 2

    Participant: RING-box protein 2

    Accession: EBI-6175184

    Name: EBI-398632

    Confidences:

    Type
    Value
    No records found.

    17
    EBI-456179
     logo
    CUL2
    Cullin-2
    Homo sapiens
    Organism Details

    Accession: EBI-874

    Name: human

    Description: Homo sapiens

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    human

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    so
    SO:0000358
    -
    see-also
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: Cullin-2

    Participant: Cullin-2

    Accession: EBI-6175187

    Name: EBI-456179

    Annotations:

    Topic
    Text
    0.77

    P
    Participant: Cullin-2

    Participant: Cullin-2

    Accession: EBI-6175187

    Name: EBI-456179

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: Cullin-2

    Participant: Cullin-2

    Accession: EBI-6175187

    Name: EBI-456179

    Stoichiometry: 0.0

    F
    Participant: Cullin-2

    Participant: Cullin-2

    Accession: EBI-6175187

    Name: EBI-456179

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: Cullin-2

    Participant: Cullin-2

    Accession: EBI-6175187

    Name: EBI-456179

    Confidences:

    Type
    Value
    No records found.

    18
    EBI-301231
     logo
    ELOC
    Elongin 15 kDa subunit
    RNA polymerase II transcription factor SIII subunit C

    [+3]
    Elongin-C
    Homo sapiens
    Organism Details

    Accession: EBI-874

    Name: human

    Description: Homo sapiens

    Cross References:

    Database
    Identifier
    Secondary identifier
    Qualifier
    human

    Expressed In Details

    Accession:

    Name:

    -
    prey
    Experimental role: prey
    Accession: EBI-58

    Name: prey

    Description: prey

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0498
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Molecule experimentally identified as being captured by a given bait.


    unspecified role
    Biological role: unspecified role
    Accession: EBI-77781

    Name: unspecified role

    Description: unspecified role

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    psi-mi
    MI:0499
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    Role not specified or not applicable to the data.


    protein
    Interactor type: protein
    Accession: EBI-619654

    Name: protein

    Description: protein

    Cross References:
    Database
    Identifier
    Secondary identifier
    Qualifier
    so
    SO:0000358
    -
    see-also
    psi-mi
    MI:0326
    -
    identity
    pubmed
    14755292
    -
    primary-reference


    Annotations:
    Topic
    Text
    definition
    A linear polymer of amino acids joined by peptide bonds in a specific sequence.


    A
    Participant: Elongin-C

    Participant: Elongin-C

    Accession: EBI-6175190

    Name: EBI-301231

    Annotations:

    Topic
    Text
    0.95

    P
    Participant: Elongin-C

    Participant: Elongin-C

    Accession: EBI-6175190

    Name: EBI-301231

    Parameters:

    Type
    Value
    Unit
    Base
    Exponent
    Uncertainty
    No records found.


    S
    Participant: Elongin-C

    Participant: Elongin-C

    Accession: EBI-6175190

    Name: EBI-301231

    Stoichiometry: 0.0

    F
    Participant: Elongin-C

    Participant: Elongin-C

    Accession: EBI-6175190

    Name: EBI-301231

    Features:

    Legend:
    A
    Annotation and Cross Reference  
    Feature Name
    Feature Type
    Detection Method
    Range positions
    More...
    No records found.

    C
    Participant: Elongin-C

    Participant: Elongin-C

    Accession: EBI-6175190

    Name: EBI-301231

    Confidences:

    Type
    Value
    No records found.


    Graphical Representation of Experimental Features