Please wait...
loading   Loading...
What is this view?

Binary interactions

In this tab, we display the list of interactions that you have selected using one of our search features. Despite the fact that our data are annotated to accurately reflect the interactions reported in scientific literature, the data is shown in this view as binary interactions. Whenever the data was reported as a co-complex involving more than two molecules, we store it as such in the IntAct database and post-process it so the portal can show it as binary interaction. This post-processing is the Spoke Expansion model (connects bait to all preys):



sourceExp

At any moment you can choose to display the expansion column in this view in order to see which interaction are spoke expanded and which are not.

Description of what has changed

  • We have added more download options to allow users to retrieve their interaction set using more standard formats such as PSI-MI XML and PSIMITAB (version 2.5, 2.6 or 2.7) but also XGMML, RDF and Biopax (level 2 and 3).
  • We have now four different table views : minimal(molecule names and interaction AC), basic (minimal + molecule links, interaction detection method, negative), standard(minimal + molecule species, confidences, publication details, experiment details), expanded (standard + more experiment details) and complete (all mitab 2.7 columns).

Configuring the view to your need"

In the header of the interaction table you will find a button: ‘Change Column Display’ that will show you all the columns/Table views available and allow you to update the current selected set.

Downloading the data into Standard formats"

In the header of the interaction table you will find a drop down list that contains all the formats currently supported when downloading the interaction data. Select one of them and click the export button next to the list. Please note that PSI-MI XML is only available when the interaction set is no bigger than 1000 interactions.

Opening the interaction details"

Clicking on the magnifying glass in the first column of the interaction table will open the details of the corresponding interaction in the Interaction Details tab, giving you access to more details of the manually curated record.

What is this view?

Browsing (Browse Tab)

This tab is meant to give you access to more content based on the currently selected set of interactions. Please note that linking to third party resources will only include up to 200 molecules , if you exceed this number you will see the warning icon (This number has been reduced to 125 molecules for mRNA expression). Now let’s look at the features available to you:

Limiting the scope of the current dataset with the Uniprot Taxonomy ontology

Allows users to browse the Uniprot Taxonomy hierarchy as a tree and select terms in order to narrow down their dataset. Once a term is selected, you are taken back to the interaction tab to review your dataset.

Limiting the scope of the current dataset with the GO ontology

Allows users to browse the GO hierarchy as a tree and select terms in order to narrow down their dataset. Once a term is selected, you are taken back to the interaction tab to review your dataset.

Limiting the scope of the current dataset with the ChEBI ontology

Allows users to browse the ChEBI hierarchy as a tree and select terms in order to narrow down their dataset. Once a term is selected, you are taken back to the interaction tab to review your dataset.

Bulk linking to third party resources by using involved proteins

  • Proteins by Reactome pathway: Sends your proteins to the Reactome SkyPainter that will show you the pathways in which these molecules are know to play a role.
  • Proteins by Chromosomal location: Sends your list of proteins to Ensembl’s Karyotype viewer and overlays the proteins on the chromosomes.
  • Proteins by mRNA expression: Sends your set of proteins to the ArrayExpress Atlas that will show the known gene expression based on experimental studies.
What is this view?

Searching Interactions (Search Tab)

As you can see in this tab we are now trying to give you more targeted choice to do your queries, please note that the examples provided in this tab are live links so you can simply click them to see the resulting interactions sets.

Using the Quick Search

In this search panel you are free to type anything that might relate to interactions, whether it is properties of their interactor (gene name, identifiers, GO term…) or more specific to the interaction like publication, authors, experimental detection method, ...

Some examples:

  • Try the query: imatinib
    This is a drug for which we have curated a number of interactions.
    Once you press the search button you should be taken to the Interaction Tab that lists 130 binary interactions.
    If you want to construct more complex queries we recommend you take a look at the Molecular Interaction Query Language, accessible from the quick search panel.
  • Try the query: species:yeast AND type:"direct interaction"
    This query selects all interactions involving yeast interactors that have been shown to have direct interactions. If you customize the column display of the interaction tab, you will see that not only “direct interaction” have been selected but also children terms in the PSI-MI ontology.

Using the Ontology Search

Open the Rearch Tab. This panel is specialised to give you an easy access to ontology search. So far you can search on 4 ontologies:

  • Gene Ontology
  • InterPro
  • PSI-MI
  • ChEBI

Whenever you start typing a query in this search panel, the system will search as you type and propose a list of matching controlled vocabulary terms. You can then select one of them and select matching interactions.

For example, type: cancer
You will be presented with a few choices, please note that each term is followed by the count of matching interactions in the IntAct database.

Select a term with the mouse or using the keyboard cursor keys and you will be taken to the interaction tab.

Searching the Compound chemical structure

In this panel you will be able to draw all or part of a chemical structure and search for chemical compounds. If you get any matched, you can then see all interactions involving them.

First you have to open up the chemical search panel so that the applet can load, it might take a few seconds. Then you can start drawing your structure, for instance:

Once you have drawn your structure, select Similarity and press Search. You should be presented with a list of matching compound. Now choose one molecule and click the link: IntAct interactions. You will be taken to the interaction tab to review the data.

Complex Expansion

Binary interactions generated by co-complex expansion

Why should you care about complex expansion ?

Some experimental methods such as Tandem Affinity Purification do generate molecular interactions that can involve more than 2 molecules. Despite the fact that IntAct curation team do capture the molecular interaction as they were reported in the corresponding experiment, when you search using the intact web site, the results of your query is always shown as set of binary interactions (i.e. 2 molecules). We would like to draw your attention on the fact that whenever the reported interaction was a co-complex we do apply an expansion algorithm that transform this n-ary interaction into a set of binary interactions. While none of these agorithms is perfect and will very likely generate some false positive interactions, it is useful to present the data in a consistent manner. Bear in mind that we will strive to differentiate in the search results which interactions are a real experimental binary from expanded ones.

Existing expansion algorithm

There are several known algorithm allowing to transform an n-ary interaction into a set of binaries. The illustration below present the two well known expansion model and illustrates why they can be incorrect.



sourceExp

  • Spoke expansion: Links the bait molecule to all prey molecules. If N is the count of molecule in the complex, it generated N-1 binary interactions.
  • Matrix expansion: Links all molecule to all other molecule present in the complex. If N is the count of molecule in the complex, it generated (N*(N-1))/2 binary interactions.

Now the issue (as illustrated at the bottom right of the diagram above) with these two models lies in the fact that the real complex might not be articulated around the experimental bait but instead, this bait might be linked to a smaller complex, hence most binary interaction generated by spoke and matrix expansion result in false positive.



PSICQUIC

How is the number of interactions in other databases obtained?

PSICQUIC is a standard way to access molecular interaction databases across which it repeats the same query. The number of databases providing data may vary, depending on the status of their services and only those that are active are used in this query. By clicking on the number of interactions you will be redirected to the PSICQUIC View, where you can browse the results in those other resources.

The services currently active are:

Check the PSICQUIC site for more information.

IMEx

What is the significance of the IMEx dataset?"

IMEx is a network of databases which have agreed to supply a non-redundant set of data expertly manually annotated to the same consistent detailed standard which, as such, represents a high-quality subset of the data each individually provides. The number of databases providing data may vary, depending on the status of their services and only those that are active are used in this query. By clicking on the number of interactions you will be redirected to the IMEx View, where you can browse the results in those other resources.

The services currently active are:

Check the IMEx site for more information.

What is this view?

Representation of Experimental Features

This section shows the graphical representation of experimental features, where each participant is represented as a white rectangle with a black border and a line for each hundredth amino acid. All available features are attached to their associated participant and their categories are represented in the right side of the legend. The left side of the legend dynamically shows the range statuses occuring in the shown interaction. These are the possible range statuses:

sourceExp

Interacting with the widget

Hover over a feature to see more information in a tooltip.
sourceExp

To display a single interacting region click on it and click again to display all interacting regions.
Displaying all interacting regionsDisplaying one interacting region
sourceExpsourceExp
What is this view?

Dynamic molecular interaction data

This section shows the graphical representation of dynamic molecular interactions. By default it displays all the interactions from one experiment using radio buttons to allow users to highlight interactions in different variable conditions.

Publication

PubMed Id: 21282530

Journal: Mol. Cell Proteomics (1535-9476)

Year of Publication: 2011

Title: Interaction Proteomics Analysis of Polycomb Proteins Defines Distinct PRC1 Complexes in Mammalian Cells.

Author List: Vandamme J., Volkel P., Rosnoblet C., Le Faou P., Angrand PO.

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-

Annotations:

Topic
Text
Apoptosis - Interactions involving proteins with a function related to apoptosis

Experiment (5 interactions)

Accession: EBI-3946088

Name: vandamme-2011-1

Host organism: Homo sapiens epitheloid cervix carcinoma cells

Organism: Homo sapiens epitheloid cervix carcinoma cells

Accession: EBI-307614

Name: human-hela

Description: Homo sapiens epitheloid cervix carcinoma cells

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human
-

Interaction Detection Method: tap

Interaction detection method: tap
Accession: EBI-933908

Name: tap

Description: tandem affinity purification

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0676
-
identity
pubmed
11403571
-
primary-reference


Annotations:
Topic
Text
definition
Tandem affinity purification allows rapid purification under native conditions of complexes, even when expressed at their natural level. Prior knowledge of complex composition or function is not required. The TAP method requires fusion of the a multiple tag, either N- or C-terminally, to the target (or bait) protein of interest. The multiple tag allows two steps purification steps ensuring a highly selective complex purification.


Participant Identification Method: sequence tag

Participant identification method: sequence tag
Accession: EBI-81

Name: sequence tag

Description: sequence tag identification

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0102
-
identity
pubmed
10967324
-
primary-reference
pubmed
11752590
-
primary-reference
pubmed
11805837
-
primary-reference


Annotations:
Topic
Text
definition
This approach leads to protein identification by combining mass measurement and short amino acid sequence information obtained by tandem mass spectrometry. This information is then used to automatically find the best match in a sequence database. A mixture of peptides derived from a protease digestion is analysed by nanoelectrospray LC-MS/MS (Liquid Chromatography Tandem Mass Spectrometer or nanoESI MS/MS) mass spectrometry. Electrospray mass spectrometry cannot be applied to dilute samples and is affected by high salt. As a consequence peptides, normally extracted from acrylamide gels by in situ proteolysis, are desalted and concentrated on a microcolumn followed by elution into a capillary used for nanoelectrospray tandem mass spectrometry. A first mass spectrum (Normal mass spectrum or Q1 mass spectrum) gives information about the masses of all the peptides. Peptides observed in the normal mass spectrum are isolated in turn and dissociated into fragments by collision with gas molecules within the mass spectrometer. Some of the fragments obtained from a peptide constitute a nested set, differing by one amino acid, and the mass difference between them allows assignment of a partial sequence. The masses of the fragments define the position of the partial sequence in the peptide. Together with the cleavage specificity of the protease used to cleave the protein, and mass information such sequence tag provides much higher search specificity to match the a database entry. The procedure is repeated with several peptides from the digest, resulting in multiple identifications of the same protein or identification of several proteins from the peptide mixture. Unknown proteins can easily be identified by using the high specificity of the peptide sequence tag for searches in most sequence databases including EST or genome databases.


Cross References:

Database
Identifier
Secondary identifier
Qualifier
-

Annotations:

Topic
Text
mimix curation
pierre-olivier.angrand@iri.univ-lille1.fr
Identity of CBX4 (all tagged forms) as O00257-3 (isoform 2) according cDNA clone MGC:23084 IMAGE:4856728.

Interaction

Accession: EBI-3951861

Name: bclaf1-bmi1

Description: -

Type: association

Interaction type: association
Accession: EBI-1813191

Name: association

Description: association

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0914
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Interaction between molecules that may participate in formation of one, but possibly more, physical complexes. Often describes a set of molecules that are co-purified in a single pull-down or coimmunoprecipitation but might participate in formation of distinct physical complexes sharing a common bait.


Annotations:

Topic
Text
Table I and fig 1B

Participants (60)

Legend:
A
Annotation and Cross Reference  
P
Experimental Parameter   
S
Stoichiometry   
F
Experimental Feature
C
Participant Confidence
pp123pp
#
Name
Links
Primary Identifier
Aliases
Description
Species
Expression system
Experimental role
Biological role
Interactor type
More...
pp123pp
1
EBI-712912
 logo
Polycomb 3 homolog
Rectachrome 1
CBX8

[+2]
Chromobox protein homolog 8
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
bait
Experimental role: bait
Accession: EBI-49

Name: bait

Description: bait

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0496
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally treated to capture its interacting partners.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Chromobox protein homolog 8

Participant: Chromobox protein homolog 8

Accession: EBI-3951887

Name: EBI-712912

P
Participant: Chromobox protein homolog 8

Participant: Chromobox protein homolog 8

Accession: EBI-3951887

Name: EBI-712912

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Chromobox protein homolog 8

Participant: Chromobox protein homolog 8

Accession: EBI-3951887

Name: EBI-712912

Stoichiometry: 0.0

F
Participant: Chromobox protein homolog 8

Participant: Chromobox protein homolog 8

Accession: EBI-3951887

Name: EBI-712912

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Chromobox protein homolog 8

Participant: Chromobox protein homolog 8

Accession: EBI-3951887

Name: EBI-712912

Confidences:

Type
Value
No records found.

2
EBI-744525
 logo
HIV-1 Rev-binding protein 2
Rev-interacting protein 1
KRR1

[+2]
KRR1 small subunit processome component homolog
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: KRR1 small subunit processome component homolog

Participant: KRR1 small subunit processome component homolog

Accession: EBI-3951865

Name: EBI-744525

P
Participant: KRR1 small subunit processome component homolog

Participant: KRR1 small subunit processome component homolog

Accession: EBI-3951865

Name: EBI-744525

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: KRR1 small subunit processome component homolog

Participant: KRR1 small subunit processome component homolog

Accession: EBI-3951865

Name: EBI-744525

Stoichiometry: 0.0

F
Participant: KRR1 small subunit processome component homolog

Participant: KRR1 small subunit processome component homolog

Accession: EBI-3951865

Name: EBI-744525

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: KRR1 small subunit processome component homolog

Participant: KRR1 small subunit processome component homolog

Accession: EBI-3951865

Name: EBI-744525

Confidences:

Type
Value
No records found.

3
EBI-2954851
 logo
ZCCHC3
C20orf99
Zinc finger CCHC domain-containing protein 3
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Zinc finger CCHC domain-containing protein 3

Participant: Zinc finger CCHC domain-containing protein 3

Accession: EBI-3951866

Name: EBI-2954851

P
Participant: Zinc finger CCHC domain-containing protein 3

Participant: Zinc finger CCHC domain-containing protein 3

Accession: EBI-3951866

Name: EBI-2954851

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Zinc finger CCHC domain-containing protein 3

Participant: Zinc finger CCHC domain-containing protein 3

Accession: EBI-3951866

Name: EBI-2954851

Stoichiometry: 0.0

F
Participant: Zinc finger CCHC domain-containing protein 3

Participant: Zinc finger CCHC domain-containing protein 3

Accession: EBI-3951866

Name: EBI-2954851

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Zinc finger CCHC domain-containing protein 3

Participant: Zinc finger CCHC domain-containing protein 3

Accession: EBI-3951866

Name: EBI-2954851

Confidences:

Type
Value
No records found.

4
EBI-347804
 logo
CSNK2A1
CK2A1
Casein kinase II subunit alpha
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Casein kinase II subunit alpha

Participant: Casein kinase II subunit alpha

Accession: EBI-3951867

Name: EBI-347804

P
Participant: Casein kinase II subunit alpha

Participant: Casein kinase II subunit alpha

Accession: EBI-3951867

Name: EBI-347804

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Casein kinase II subunit alpha

Participant: Casein kinase II subunit alpha

Accession: EBI-3951867

Name: EBI-347804

Stoichiometry: 0.0

F
Participant: Casein kinase II subunit alpha

Participant: Casein kinase II subunit alpha

Accession: EBI-3951867

Name: EBI-347804

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Casein kinase II subunit alpha

Participant: Casein kinase II subunit alpha

Accession: EBI-3951867

Name: EBI-347804

Confidences:

Type
Value
No records found.

5
EBI-1753381
 logo
LIG3
DNA ligase III
Polydeoxyribonucleotide synthase [ATP] 3
DNA ligase 3
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: DNA ligase 3

Participant: DNA ligase 3

Accession: EBI-3951868

Name: EBI-1753381

P
Participant: DNA ligase 3

Participant: DNA ligase 3

Accession: EBI-3951868

Name: EBI-1753381

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: DNA ligase 3

Participant: DNA ligase 3

Accession: EBI-3951868

Name: EBI-1753381

Stoichiometry: 0.0

F
Participant: DNA ligase 3

Participant: DNA ligase 3

Accession: EBI-3951868

Name: EBI-1753381

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: DNA ligase 3

Participant: DNA ligase 3

Accession: EBI-3951868

Name: EBI-1753381

Confidences:

Type
Value
No records found.

6
EBI-358058
 logo
TSR1
KIAA1401
Pre-rRNA-processing protein TSR1 homolog
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Pre-rRNA-processing protein TSR1 homolog

Participant: Pre-rRNA-processing protein TSR1 homolog

Accession: EBI-3951869

Name: EBI-358058

P
Participant: Pre-rRNA-processing protein TSR1 homolog

Participant: Pre-rRNA-processing protein TSR1 homolog

Accession: EBI-3951869

Name: EBI-358058

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Pre-rRNA-processing protein TSR1 homolog

Participant: Pre-rRNA-processing protein TSR1 homolog

Accession: EBI-3951869

Name: EBI-358058

Stoichiometry: 0.0

F
Participant: Pre-rRNA-processing protein TSR1 homolog

Participant: Pre-rRNA-processing protein TSR1 homolog

Accession: EBI-3951869

Name: EBI-358058

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Pre-rRNA-processing protein TSR1 homolog

Participant: Pre-rRNA-processing protein TSR1 homolog

Accession: EBI-3951869

Name: EBI-358058

Confidences:

Type
Value
No records found.

7
EBI-2827999
 logo
PCGF5
RNF159
RING finger protein 159
Polycomb group RING finger protein 5
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Polycomb group RING finger protein 5

Participant: Polycomb group RING finger protein 5

Accession: EBI-3951870

Name: EBI-2827999

P
Participant: Polycomb group RING finger protein 5

Participant: Polycomb group RING finger protein 5

Accession: EBI-3951870

Name: EBI-2827999

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Polycomb group RING finger protein 5

Participant: Polycomb group RING finger protein 5

Accession: EBI-3951870

Name: EBI-2827999

Stoichiometry: 0.0

F
Participant: Polycomb group RING finger protein 5

Participant: Polycomb group RING finger protein 5

Accession: EBI-3951870

Name: EBI-2827999

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Polycomb group RING finger protein 5

Participant: Polycomb group RING finger protein 5

Accession: EBI-3951870

Name: EBI-2827999

Confidences:

Type
Value
No records found.

8
EBI-78579
 logo
NPM1
NPM
Nucleolar phosphoprotein B23

[+2]
Nucleophosmin
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Nucleophosmin

Participant: Nucleophosmin

Accession: EBI-3951871

Name: EBI-78579

P
Participant: Nucleophosmin

Participant: Nucleophosmin

Accession: EBI-3951871

Name: EBI-78579

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Nucleophosmin

Participant: Nucleophosmin

Accession: EBI-3951871

Name: EBI-78579

Stoichiometry: 0.0

F
Participant: Nucleophosmin

Participant: Nucleophosmin

Accession: EBI-3951871

Name: EBI-78579

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Nucleophosmin

Participant: Nucleophosmin

Accession: EBI-3951871

Name: EBI-78579

Confidences:

Type
Value
No records found.

9
EBI-722416
 logo
RING finger protein 2
RING finger protein 1B
RING finger protein BAP-1

[+8]
E3 ubiquitin-protein ligase RING2
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: E3 ubiquitin-protein ligase RING2

Participant: E3 ubiquitin-protein ligase RING2

Accession: EBI-3951872

Name: EBI-722416

P
Participant: E3 ubiquitin-protein ligase RING2

Participant: E3 ubiquitin-protein ligase RING2

Accession: EBI-3951872

Name: EBI-722416

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: E3 ubiquitin-protein ligase RING2

Participant: E3 ubiquitin-protein ligase RING2

Accession: EBI-3951872

Name: EBI-722416

Stoichiometry: 0.0

F
Participant: E3 ubiquitin-protein ligase RING2

Participant: E3 ubiquitin-protein ligase RING2

Accession: EBI-3951872

Name: EBI-722416

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: E3 ubiquitin-protein ligase RING2

Participant: E3 ubiquitin-protein ligase RING2

Accession: EBI-3951872

Name: EBI-722416

Confidences:

Type
Value
No records found.

10
EBI-357986
 logo
HIST1H2BB
H2BFF
Histone H2B.f

[+1]
Histone H2B type 1-B
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Histone H2B type 1-B

Participant: Histone H2B type 1-B

Accession: EBI-3951873

Name: EBI-357986

P
Participant: Histone H2B type 1-B

Participant: Histone H2B type 1-B

Accession: EBI-3951873

Name: EBI-357986

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Histone H2B type 1-B

Participant: Histone H2B type 1-B

Accession: EBI-3951873

Name: EBI-357986

Stoichiometry: 0.0

F
Participant: Histone H2B type 1-B

Participant: Histone H2B type 1-B

Accession: EBI-3951873

Name: EBI-357986

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Histone H2B type 1-B

Participant: Histone H2B type 1-B

Accession: EBI-3951873

Name: EBI-357986

Confidences:

Type
Value
No records found.

11
EBI-348169
 logo
Phosvitin
Protein G5a
CSNK2B

[+2]
Casein kinase II subunit beta
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Casein kinase II subunit beta

Participant: Casein kinase II subunit beta

Accession: EBI-3951874

Name: EBI-348169

P
Participant: Casein kinase II subunit beta

Participant: Casein kinase II subunit beta

Accession: EBI-3951874

Name: EBI-348169

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Casein kinase II subunit beta

Participant: Casein kinase II subunit beta

Accession: EBI-3951874

Name: EBI-348169

Stoichiometry: 0.0

F
Participant: Casein kinase II subunit beta

Participant: Casein kinase II subunit beta

Accession: EBI-3951874

Name: EBI-348169

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Casein kinase II subunit beta

Participant: Casein kinase II subunit beta

Accession: EBI-3951874

Name: EBI-348169

Confidences:

Type
Value
No records found.

12
EBI-358318
 logo
FBL
FIB1
FLRN

[+2]
rRNA 2'-O-methyltransferase fibrillarin
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: rRNA 2'-O-methyltransferase fibrillarin

Participant: rRNA 2'-O-methyltransferase fibrillarin

Accession: EBI-3951875

Name: EBI-358318

P
Participant: rRNA 2'-O-methyltransferase fibrillarin

Participant: rRNA 2'-O-methyltransferase fibrillarin

Accession: EBI-3951875

Name: EBI-358318

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: rRNA 2'-O-methyltransferase fibrillarin

Participant: rRNA 2'-O-methyltransferase fibrillarin

Accession: EBI-3951875

Name: EBI-358318

Stoichiometry: 0.0

F
Participant: rRNA 2'-O-methyltransferase fibrillarin

Participant: rRNA 2'-O-methyltransferase fibrillarin

Accession: EBI-3951875

Name: EBI-358318

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: rRNA 2'-O-methyltransferase fibrillarin

Participant: rRNA 2'-O-methyltransferase fibrillarin

Accession: EBI-3951875

Name: EBI-358318

Confidences:

Type
Value
No records found.

13
EBI-715814
 logo
OGA
Beta-N-acetylglucosaminidase
Beta-N-acetylhexosaminidase

[+9]
Protein O-GlcNAcase
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Protein O-GlcNAcase

Participant: Protein O-GlcNAcase

Accession: EBI-3951876

Name: EBI-715814

P
Participant: Protein O-GlcNAcase

Participant: Protein O-GlcNAcase

Accession: EBI-3951876

Name: EBI-715814

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Protein O-GlcNAcase

Participant: Protein O-GlcNAcase

Accession: EBI-3951876

Name: EBI-715814

Stoichiometry: 0.0

F
Participant: Protein O-GlcNAcase

Participant: Protein O-GlcNAcase

Accession: EBI-3951876

Name: EBI-715814

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Protein O-GlcNAcase

Participant: Protein O-GlcNAcase

Accession: EBI-3951876

Name: EBI-715814

Confidences:

Type
Value
No records found.

14
EBI-78756
 logo
ILF3
MPHOSPH4
NF90

[+6]
Interleukin enhancer-binding factor 3
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Interleukin enhancer-binding factor 3

Participant: Interleukin enhancer-binding factor 3

Accession: EBI-3951877

Name: EBI-78756

P
Participant: Interleukin enhancer-binding factor 3

Participant: Interleukin enhancer-binding factor 3

Accession: EBI-3951877

Name: EBI-78756

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Interleukin enhancer-binding factor 3

Participant: Interleukin enhancer-binding factor 3

Accession: EBI-3951877

Name: EBI-78756

Stoichiometry: 0.0

F
Participant: Interleukin enhancer-binding factor 3

Participant: Interleukin enhancer-binding factor 3

Accession: EBI-3951877

Name: EBI-78756

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Interleukin enhancer-binding factor 3

Participant: Interleukin enhancer-binding factor 3

Accession: EBI-3951877

Name: EBI-78756

Confidences:

Type
Value
No records found.

15
EBI-1057466
 logo
YTHDC2
YTH domain-containing protein 2
3'-5' RNA helicase YTHDC2
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: 3'-5' RNA helicase YTHDC2

Participant: 3'-5' RNA helicase YTHDC2

Accession: EBI-3951878

Name: EBI-1057466

P
Participant: 3'-5' RNA helicase YTHDC2

Participant: 3'-5' RNA helicase YTHDC2

Accession: EBI-3951878

Name: EBI-1057466

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: 3'-5' RNA helicase YTHDC2

Participant: 3'-5' RNA helicase YTHDC2

Accession: EBI-3951878

Name: EBI-1057466

Stoichiometry: 0.0

F
Participant: 3'-5' RNA helicase YTHDC2

Participant: 3'-5' RNA helicase YTHDC2

Accession: EBI-3951878

Name: EBI-1057466

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: 3'-5' RNA helicase YTHDC2

Participant: 3'-5' RNA helicase YTHDC2

Accession: EBI-3951878

Name: EBI-1057466

Confidences:

Type
Value
No records found.

16
EBI-347640
 logo
ALYREF
ALY
Ally of AML-1 and LEF-1

[+5]
THO complex subunit 4
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: THO complex subunit 4

Participant: THO complex subunit 4

Accession: EBI-3951879

Name: EBI-347640

P
Participant: THO complex subunit 4

Participant: THO complex subunit 4

Accession: EBI-3951879

Name: EBI-347640

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: THO complex subunit 4

Participant: THO complex subunit 4

Accession: EBI-3951879

Name: EBI-347640

Stoichiometry: 0.0

F
Participant: THO complex subunit 4

Participant: THO complex subunit 4

Accession: EBI-3951879

Name: EBI-347640

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: THO complex subunit 4

Participant: THO complex subunit 4

Accession: EBI-3951879

Name: EBI-347640

Confidences:

Type
Value
No records found.

17
EBI-724923
 logo
KRI1
Protein KRI1 homolog
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Protein KRI1 homolog

Participant: Protein KRI1 homolog

Accession: EBI-3951880

Name: EBI-724923

P
Participant: Protein KRI1 homolog

Participant: Protein KRI1 homolog

Accession: EBI-3951880

Name: EBI-724923

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Protein KRI1 homolog

Participant: Protein KRI1 homolog

Accession: EBI-3951880

Name: EBI-724923

Stoichiometry: 0.0

F
Participant: Protein KRI1 homolog

Participant: Protein KRI1 homolog

Accession: EBI-3951880

Name: EBI-724923

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Protein KRI1 homolog

Participant: Protein KRI1 homolog

Accession: EBI-3951880

Name: EBI-724923

Confidences:

Type
Value
No records found.

18
EBI-749901
 logo
RING finger protein 68
Nervous system Polycomb-1
PCGF1

[+2]
Polycomb group RING finger protein 1
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Polycomb group RING finger protein 1

Participant: Polycomb group RING finger protein 1

Accession: EBI-3951881

Name: EBI-749901

P
Participant: Polycomb group RING finger protein 1

Participant: Polycomb group RING finger protein 1

Accession: EBI-3951881

Name: EBI-749901

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Polycomb group RING finger protein 1

Participant: Polycomb group RING finger protein 1

Accession: EBI-3951881

Name: EBI-749901

Stoichiometry: 0.0

F
Participant: Polycomb group RING finger protein 1

Participant: Polycomb group RING finger protein 1

Accession: EBI-3951881

Name: EBI-749901

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Polycomb group RING finger protein 1

Participant: Polycomb group RING finger protein 1

Accession: EBI-3951881

Name: EBI-749901

Confidences:

Type
Value
No records found.

19
EBI-447295
 logo
Histone butyryltransferase p300
Histone crotonyltransferase p300
Protein propionyltransferase p300

[+4]
Histone acetyltransferase p300
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Histone acetyltransferase p300

Participant: Histone acetyltransferase p300

Accession: EBI-3951882

Name: EBI-447295

P
Participant: Histone acetyltransferase p300

Participant: Histone acetyltransferase p300

Accession: EBI-3951882

Name: EBI-447295

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Histone acetyltransferase p300

Participant: Histone acetyltransferase p300

Accession: EBI-3951882

Name: EBI-447295

Stoichiometry: 0.0

F
Participant: Histone acetyltransferase p300

Participant: Histone acetyltransferase p300

Accession: EBI-3951882

Name: EBI-447295

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Histone acetyltransferase p300

Participant: Histone acetyltransferase p300

Accession: EBI-3951882

Name: EBI-447295

Confidences:

Type
Value
No records found.

20
EBI-1055820
 logo
Moloney leukemia virus 10 protein
MOV10
KIAA1631

[+1]
Helicase MOV-10
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Helicase MOV-10

Participant: Helicase MOV-10

Accession: EBI-3951883

Name: EBI-1055820

P
Participant: Helicase MOV-10

Participant: Helicase MOV-10

Accession: EBI-3951883

Name: EBI-1055820

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Helicase MOV-10

Participant: Helicase MOV-10

Accession: EBI-3951883

Name: EBI-1055820

Stoichiometry: 0.0

F
Participant: Helicase MOV-10

Participant: Helicase MOV-10

Accession: EBI-3951883

Name: EBI-1055820

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Helicase MOV-10

Participant: Helicase MOV-10

Accession: EBI-3951883

Name: EBI-1055820

Confidences:

Type
Value
No records found.