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What is this view?

Binary interactions

In this tab, we display the list of interactions that you have selected using one of our search features. Despite the fact that our data are annotated to accurately reflect the interactions reported in scientific literature, the data is shown in this view as binary interactions. Whenever the data was reported as a co-complex involving more than two molecules, we store it as such in the IntAct database and post-process it so the portal can show it as binary interaction. This post-processing is the Spoke Expansion model (connects bait to all preys):



sourceExp

At any moment you can choose to display the expansion column in this view in order to see which interaction are spoke expanded and which are not.

Description of what has changed

  • We have added more download options to allow users to retrieve their interaction set using more standard formats such as PSI-MI XML and PSIMITAB (version 2.5, 2.6 or 2.7) but also XGMML, RDF and Biopax (level 2 and 3).
  • We have now four different table views : minimal(molecule names and interaction AC), basic (minimal + molecule links, interaction detection method, negative), standard(minimal + molecule species, confidences, publication details, experiment details), expanded (standard + more experiment details) and complete (all mitab 2.7 columns).

Configuring the view to your need"

In the header of the interaction table you will find a button: ‘Change Column Display’ that will show you all the columns/Table views available and allow you to update the current selected set.

Downloading the data into Standard formats"

In the header of the interaction table you will find a drop down list that contains all the formats currently supported when downloading the interaction data. Select one of them and click the export button next to the list. Please note that PSI-MI XML is only available when the interaction set is no bigger than 1000 interactions.

Opening the interaction details"

Clicking on the magnifying glass in the first column of the interaction table will open the details of the corresponding interaction in the Interaction Details tab, giving you access to more details of the manually curated record.

What is this view?

Browsing (Browse Tab)

This tab is meant to give you access to more content based on the currently selected set of interactions. Please note that linking to third party resources will only include up to 200 molecules , if you exceed this number you will see the warning icon (This number has been reduced to 125 molecules for mRNA expression). Now let’s look at the features available to you:

Limiting the scope of the current dataset with the Uniprot Taxonomy ontology

Allows users to browse the Uniprot Taxonomy hierarchy as a tree and select terms in order to narrow down their dataset. Once a term is selected, you are taken back to the interaction tab to review your dataset.

Limiting the scope of the current dataset with the GO ontology

Allows users to browse the GO hierarchy as a tree and select terms in order to narrow down their dataset. Once a term is selected, you are taken back to the interaction tab to review your dataset.

Limiting the scope of the current dataset with the ChEBI ontology

Allows users to browse the ChEBI hierarchy as a tree and select terms in order to narrow down their dataset. Once a term is selected, you are taken back to the interaction tab to review your dataset.

Bulk linking to third party resources by using involved proteins

  • Proteins by Reactome pathway: Sends your proteins to the Reactome SkyPainter that will show you the pathways in which these molecules are know to play a role.
  • Proteins by Chromosomal location: Sends your list of proteins to Ensembl’s Karyotype viewer and overlays the proteins on the chromosomes.
  • Proteins by mRNA expression: Sends your set of proteins to the ArrayExpress Atlas that will show the known gene expression based on experimental studies.
What is this view?

Searching Interactions (Search Tab)

As you can see in this tab we are now trying to give you more targeted choice to do your queries, please note that the examples provided in this tab are live links so you can simply click them to see the resulting interactions sets.

Using the Quick Search

In this search panel you are free to type anything that might relate to interactions, whether it is properties of their interactor (gene name, identifiers, GO term…) or more specific to the interaction like publication, authors, experimental detection method, ...

Some examples:

  • Try the query: imatinib
    This is a drug for which we have curated a number of interactions.
    Once you press the search button you should be taken to the Interaction Tab that lists 130 binary interactions.
    If you want to construct more complex queries we recommend you take a look at the Molecular Interaction Query Language, accessible from the quick search panel.
  • Try the query: species:yeast AND type:"direct interaction"
    This query selects all interactions involving yeast interactors that have been shown to have direct interactions. If you customize the column display of the interaction tab, you will see that not only “direct interaction” have been selected but also children terms in the PSI-MI ontology.

Using the Ontology Search

Open the Rearch Tab. This panel is specialised to give you an easy access to ontology search. So far you can search on 4 ontologies:

  • Gene Ontology
  • InterPro
  • PSI-MI
  • ChEBI

Whenever you start typing a query in this search panel, the system will search as you type and propose a list of matching controlled vocabulary terms. You can then select one of them and select matching interactions.

For example, type: cancer
You will be presented with a few choices, please note that each term is followed by the count of matching interactions in the IntAct database.

Select a term with the mouse or using the keyboard cursor keys and you will be taken to the interaction tab.

Searching the Compound chemical structure

In this panel you will be able to draw all or part of a chemical structure and search for chemical compounds. If you get any matched, you can then see all interactions involving them.

First you have to open up the chemical search panel so that the applet can load, it might take a few seconds. Then you can start drawing your structure, for instance:

Once you have drawn your structure, select Similarity and press Search. You should be presented with a list of matching compound. Now choose one molecule and click the link: IntAct interactions. You will be taken to the interaction tab to review the data.

Complex Expansion

Binary interactions generated by co-complex expansion

Why should you care about complex expansion ?

Some experimental methods such as Tandem Affinity Purification do generate molecular interactions that can involve more than 2 molecules. Despite the fact that IntAct curation team do capture the molecular interaction as they were reported in the corresponding experiment, when you search using the intact web site, the results of your query is always shown as set of binary interactions (i.e. 2 molecules). We would like to draw your attention on the fact that whenever the reported interaction was a co-complex we do apply an expansion algorithm that transform this n-ary interaction into a set of binary interactions. While none of these agorithms is perfect and will very likely generate some false positive interactions, it is useful to present the data in a consistent manner. Bear in mind that we will strive to differentiate in the search results which interactions are a real experimental binary from expanded ones.

Existing expansion algorithm

There are several known algorithm allowing to transform an n-ary interaction into a set of binaries. The illustration below present the two well known expansion model and illustrates why they can be incorrect.



sourceExp

  • Spoke expansion: Links the bait molecule to all prey molecules. If N is the count of molecule in the complex, it generated N-1 binary interactions.
  • Matrix expansion: Links all molecule to all other molecule present in the complex. If N is the count of molecule in the complex, it generated (N*(N-1))/2 binary interactions.

Now the issue (as illustrated at the bottom right of the diagram above) with these two models lies in the fact that the real complex might not be articulated around the experimental bait but instead, this bait might be linked to a smaller complex, hence most binary interaction generated by spoke and matrix expansion result in false positive.



PSICQUIC

How is the number of interactions in other databases obtained?

PSICQUIC is a standard way to access molecular interaction databases across which it repeats the same query. The number of databases providing data may vary, depending on the status of their services and only those that are active are used in this query. By clicking on the number of interactions you will be redirected to the PSICQUIC View, where you can browse the results in those other resources.

The services currently active are:

Check the PSICQUIC site for more information.

IMEx

What is the significance of the IMEx dataset?"

IMEx is a network of databases which have agreed to supply a non-redundant set of data expertly manually annotated to the same consistent detailed standard which, as such, represents a high-quality subset of the data each individually provides. The number of databases providing data may vary, depending on the status of their services and only those that are active are used in this query. By clicking on the number of interactions you will be redirected to the IMEx View, where you can browse the results in those other resources.

The services currently active are:

Check the IMEx site for more information.

What is this view?

Representation of Experimental Features

This section shows the graphical representation of experimental features, where each participant is represented as a white rectangle with a black border and a line for each hundredth amino acid. All available features are attached to their associated participant and their categories are represented in the right side of the legend. The left side of the legend dynamically shows the range statuses occuring in the shown interaction. These are the possible range statuses:

sourceExp

Interacting with the widget

Hover over a feature to see more information in a tooltip.
sourceExp

To display a single interacting region click on it and click again to display all interacting regions.
Displaying all interacting regionsDisplaying one interacting region
sourceExpsourceExp
What is this view?

Dynamic molecular interaction data

This section shows the graphical representation of dynamic molecular interactions. By default it displays all the interactions from one experiment using radio buttons to allow users to highlight interactions in different variable conditions.

Publication

PubMed Id: 29476059

Journal: Scientific reports

Year of Publication: 2018

Title: Identification and characterization of the BRI2 interactome in the brain.

Author List: Martins F., Marafona AM., Pereira CD., Müller T., Loosse C., Kolbe K., da Cruz E Silva OAB., Rebelo S.

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-
-

Experiment (1 interaction)

Accession: EBI-26436613

Name: martins-2018-1

Host organism: Rattus norvegicus

Organism: Rattus norvegicus

Accession: EBI-2128180

Name: rat-brain-cerebellum

Description: Rattus norvegicus

Cross References:

Database
Identifier
Secondary identifier
Qualifier
rat

Interaction Detection Method: anti bait coip

Interaction detection method: anti bait coip
Accession: EBI-976

Name: anti bait coip

Description: anti bait coimmunoprecipitation

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0006
-
identity
pubmed
7708014
-
primary-reference


Annotations:
Topic
Text
definition
A specific antibody for the molecule of interest (bait) is available, this is used to generate a high affinity resin to capture the endogenous bait present in a sample.


Participant Identification Method: sequence tag

Participant identification method: sequence tag
Accession: EBI-81

Name: sequence tag

Description: sequence tag identification

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0102
-
identity
pubmed
10967324
-
primary-reference
pubmed
11752590
-
primary-reference
pubmed
11805837
-
primary-reference


Annotations:
Topic
Text
definition
This approach leads to protein identification by combining mass measurement and short amino acid sequence information obtained by tandem mass spectrometry. This information is then used to automatically find the best match in a sequence database. A mixture of peptides derived from a protease digestion is analysed by nanoelectrospray LC-MS/MS (Liquid Chromatography Tandem Mass Spectrometer or nanoESI MS/MS) mass spectrometry. Electrospray mass spectrometry cannot be applied to dilute samples and is affected by high salt. As a consequence peptides, normally extracted from acrylamide gels by in situ proteolysis, are desalted and concentrated on a microcolumn followed by elution into a capillary used for nanoelectrospray tandem mass spectrometry. A first mass spectrum (Normal mass spectrum or Q1 mass spectrum) gives information about the masses of all the peptides. Peptides observed in the normal mass spectrum are isolated in turn and dissociated into fragments by collision with gas molecules within the mass spectrometer. Some of the fragments obtained from a peptide constitute a nested set, differing by one amino acid, and the mass difference between them allows assignment of a partial sequence. The masses of the fragments define the position of the partial sequence in the peptide. Together with the cleavage specificity of the protease used to cleave the protein, and mass information such sequence tag provides much higher search specificity to match the a database entry. The procedure is repeated with several peptides from the digest, resulting in multiple identifications of the same protein or identification of several proteins from the peptide mixture. Unknown proteins can easily be identified by using the high specificity of the peptide sequence tag for searches in most sequence databases including EST or genome databases.


Cross References:

Database
Identifier
Secondary identifier
Qualifier
-
-

Annotations:

Topic
Text
imex curation
srebelo@ua.pt
Given the expression pattern of BRI2 in the brain, three different regions were chosen, namely cerebral cortex, hippocampus and cerebellum. Briefly, the above-mentioned brain regions were dissected out and subjected to co-immunoprecipitation (co-IP) using a BRI2 specific antibody against the N-terminal region of the protein.
The co-IPed proteins were analyzed by HPLC-MS/MS. The identified proteins were subjected to data processing and filtering; some proteins were only identified in the BRI2 co-IP samples and never in the controls, while others appeared both in the controls IPs and BRI2 co-IPs. These latter proteins were considered as BRI2 putative interactors if the peptide spectrum matches (PSM) ratio between co-IP samples and controls ≥ 2.0.
Only protein-protein interactions
imex curation

Interaction

Accession: EBI-26438079

Name: a2m-7

Description: -

Type: association

Interaction type: association
Accession: EBI-1813191

Name: association

Description: association

Cross References:
Database
Identifier
Secondary identifier
Qualifier
pubmed
14755292
-
primary-reference
psi-mi
MI:0914
-
identity


Annotations:
Topic
Text
definition
Interaction between molecules that may participate in formation of one, but possibly more, physical complexes. Often describes a set of molecules that are co-purified in a single pull-down or coimmunoprecipitation but might participate in formation of distinct physical complexes sharing a common bait.


Cross References:

Database
Identifier
Secondary identifier
Qualifier
-

Annotations:

Topic
Text
ST1

Participants (256)

Legend:
A
Annotation and Cross Reference  
P
Experimental Parameter   
S
Stoichiometry   
F
Experimental Feature
C
Participant Confidence
pp12345678910pp
#
Name
Links
Primary Identifier
Aliases
Description
Species
Expression system
Experimental role
Biological role
Interactor type
More...
pp12345678910pp
1
EBI-15348306
 logo
Itm2b
Immature BRI2
Transmembrane protein BRI
Integral membrane protein 2B
Rattus norvegicus (Rat)
Organism Details

Accession: EBI-937

Name: rat

Description: Rattus norvegicus (Rat)

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-

Expressed In Details

Accession:

Name:

-
bait
Experimental role: bait
Accession: EBI-49

Name: bait

Description: bait

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0496
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally treated to capture its interacting partners.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference
so
SO:0000358
-
see-also


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Integral membrane protein 2B

Participant: Integral membrane protein 2B

Accession: EBI-26438080

Name: EBI-15348306

P
Participant: Integral membrane protein 2B

Participant: Integral membrane protein 2B

Accession: EBI-26438080

Name: EBI-15348306

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Integral membrane protein 2B

Participant: Integral membrane protein 2B

Accession: EBI-26438080

Name: EBI-15348306

Stoichiometry: 0.0

F
Participant: Integral membrane protein 2B

Participant: Integral membrane protein 2B

Accession: EBI-26438080

Name: EBI-15348306

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Integral membrane protein 2B

Participant: Integral membrane protein 2B

Accession: EBI-26438080

Name: EBI-15348306

Confidences:

Type
Value
No records found.

2
EBI-21997101
 logo
Fxr1
Fxr1h
Fragile X mental retardation syndrome-related protein 1
Rattus norvegicus (Rat)
Organism Details

Accession: EBI-937

Name: rat

Description: Rattus norvegicus (Rat)

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference
so
SO:0000358
-
see-also


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Fragile X mental retardation syndrome-related protein 1

Participant: Fragile X mental retardation syndrome-related protein 1

Accession: EBI-26438081

Name: EBI-21997101

P
Participant: Fragile X mental retardation syndrome-related protein 1

Participant: Fragile X mental retardation syndrome-related protein 1

Accession: EBI-26438081

Name: EBI-21997101

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Fragile X mental retardation syndrome-related protein 1

Participant: Fragile X mental retardation syndrome-related protein 1

Accession: EBI-26438081

Name: EBI-21997101

Stoichiometry: 0.0

F
Participant: Fragile X mental retardation syndrome-related protein 1

Participant: Fragile X mental retardation syndrome-related protein 1

Accession: EBI-26438081

Name: EBI-21997101

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Fragile X mental retardation syndrome-related protein 1

Participant: Fragile X mental retardation syndrome-related protein 1

Accession: EBI-26438081

Name: EBI-21997101

Confidences:

Type
Value
No records found.

3
EBI-354758
 logo
Ywhaz
Msfs1
Protein kinase C inhibitor protein 1

[+1]
14-3-3 protein zeta/delta
Rattus norvegicus (Rat)
Organism Details

Accession: EBI-937

Name: rat

Description: Rattus norvegicus (Rat)

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference
so
SO:0000358
-
see-also


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: 14-3-3 protein zeta/delta

Participant: 14-3-3 protein zeta/delta

Accession: EBI-26438082

Name: EBI-354758

P
Participant: 14-3-3 protein zeta/delta

Participant: 14-3-3 protein zeta/delta

Accession: EBI-26438082

Name: EBI-354758

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: 14-3-3 protein zeta/delta

Participant: 14-3-3 protein zeta/delta

Accession: EBI-26438082

Name: EBI-354758

Stoichiometry: 0.0

F
Participant: 14-3-3 protein zeta/delta

Participant: 14-3-3 protein zeta/delta

Accession: EBI-26438082

Name: EBI-354758

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: 14-3-3 protein zeta/delta

Participant: 14-3-3 protein zeta/delta

Accession: EBI-26438082

Name: EBI-354758

Confidences:

Type
Value
No records found.

4
EBI-916252
 logo
Rps10
40S ribosomal protein S10
Rattus norvegicus (Rat)
Organism Details

Accession: EBI-937

Name: rat

Description: Rattus norvegicus (Rat)

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference
so
SO:0000358
-
see-also


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: 40S ribosomal protein S10

Participant: 40S ribosomal protein S10

Accession: EBI-26438083

Name: EBI-916252

P
Participant: 40S ribosomal protein S10

Participant: 40S ribosomal protein S10

Accession: EBI-26438083

Name: EBI-916252

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: 40S ribosomal protein S10

Participant: 40S ribosomal protein S10

Accession: EBI-26438083

Name: EBI-916252

Stoichiometry: 0.0

F
Participant: 40S ribosomal protein S10

Participant: 40S ribosomal protein S10

Accession: EBI-26438083

Name: EBI-916252

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: 40S ribosomal protein S10

Participant: 40S ribosomal protein S10

Accession: EBI-26438083

Name: EBI-916252

Confidences:

Type
Value
No records found.

5
EBI-931416
 logo
Rps20
40S ribosomal protein S20
Rattus norvegicus (Rat)
Organism Details

Accession: EBI-937

Name: rat

Description: Rattus norvegicus (Rat)

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference
so
SO:0000358
-
see-also


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: 40S ribosomal protein S20

Participant: 40S ribosomal protein S20

Accession: EBI-26438084

Name: EBI-931416

P
Participant: 40S ribosomal protein S20

Participant: 40S ribosomal protein S20

Accession: EBI-26438084

Name: EBI-931416

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: 40S ribosomal protein S20

Participant: 40S ribosomal protein S20

Accession: EBI-26438084

Name: EBI-931416

Stoichiometry: 0.0

F
Participant: 40S ribosomal protein S20

Participant: 40S ribosomal protein S20

Accession: EBI-26438084

Name: EBI-931416

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: 40S ribosomal protein S20

Participant: 40S ribosomal protein S20

Accession: EBI-26438084

Name: EBI-931416

Confidences:

Type
Value
No records found.

6
EBI-931961
 logo
Rps25
40S ribosomal protein S25
Rattus norvegicus (Rat)
Organism Details

Accession: EBI-937

Name: rat

Description: Rattus norvegicus (Rat)

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference
so
SO:0000358
-
see-also


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: 40S ribosomal protein S25

Participant: 40S ribosomal protein S25

Accession: EBI-26438085

Name: EBI-931961

P
Participant: 40S ribosomal protein S25

Participant: 40S ribosomal protein S25

Accession: EBI-26438085

Name: EBI-931961

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: 40S ribosomal protein S25

Participant: 40S ribosomal protein S25

Accession: EBI-26438085

Name: EBI-931961

Stoichiometry: 0.0

F
Participant: 40S ribosomal protein S25

Participant: 40S ribosomal protein S25

Accession: EBI-26438085

Name: EBI-931961

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: 40S ribosomal protein S25

Participant: 40S ribosomal protein S25

Accession: EBI-26438085

Name: EBI-931961

Confidences:

Type
Value
No records found.

7
EBI-22252395
 logo
Rps26
40S ribosomal protein S26
Rattus norvegicus (Rat)
Organism Details

Accession: EBI-937

Name: rat

Description: Rattus norvegicus (Rat)

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference
so
SO:0000358
-
see-also


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: 40S ribosomal protein S26

Participant: 40S ribosomal protein S26

Accession: EBI-26438086

Name: EBI-22252395

P
Participant: 40S ribosomal protein S26

Participant: 40S ribosomal protein S26

Accession: EBI-26438086

Name: EBI-22252395

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: 40S ribosomal protein S26

Participant: 40S ribosomal protein S26

Accession: EBI-26438086

Name: EBI-22252395

Stoichiometry: 0.0

F
Participant: 40S ribosomal protein S26

Participant: 40S ribosomal protein S26

Accession: EBI-26438086

Name: EBI-22252395

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: 40S ribosomal protein S26

Participant: 40S ribosomal protein S26

Accession: EBI-26438086

Name: EBI-22252395

Confidences:

Type
Value
No records found.

8
EBI-917655
 logo
V-fos transformation effector protein
Rps3a
Fte1

[+1]
40S ribosomal protein S3a
Rattus norvegicus (Rat)
Organism Details

Accession: EBI-937

Name: rat

Description: Rattus norvegicus (Rat)

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference
so
SO:0000358
-
see-also


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: 40S ribosomal protein S3a

Participant: 40S ribosomal protein S3a

Accession: EBI-26438087

Name: EBI-917655

P
Participant: 40S ribosomal protein S3a

Participant: 40S ribosomal protein S3a

Accession: EBI-26438087

Name: EBI-917655

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: 40S ribosomal protein S3a

Participant: 40S ribosomal protein S3a

Accession: EBI-26438087

Name: EBI-917655

Stoichiometry: 0.0

F
Participant: 40S ribosomal protein S3a

Participant: 40S ribosomal protein S3a

Accession: EBI-26438087

Name: EBI-917655

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: 40S ribosomal protein S3a

Participant: 40S ribosomal protein S3a

Accession: EBI-26438087

Name: EBI-917655

Confidences:

Type
Value
No records found.

9
EBI-354370
 logo
Rps7
S8
40S ribosomal protein S7
Rattus norvegicus (Rat)
Organism Details

Accession: EBI-937

Name: rat

Description: Rattus norvegicus (Rat)

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference
so
SO:0000358
-
see-also


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: 40S ribosomal protein S7

Participant: 40S ribosomal protein S7

Accession: EBI-26438088

Name: EBI-354370

P
Participant: 40S ribosomal protein S7

Participant: 40S ribosomal protein S7

Accession: EBI-26438088

Name: EBI-354370

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: 40S ribosomal protein S7

Participant: 40S ribosomal protein S7

Accession: EBI-26438088

Name: EBI-354370

Stoichiometry: 0.0

F
Participant: 40S ribosomal protein S7

Participant: 40S ribosomal protein S7

Accession: EBI-26438088

Name: EBI-354370

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: 40S ribosomal protein S7

Participant: 40S ribosomal protein S7

Accession: EBI-26438088

Name: EBI-354370

Confidences:

Type
Value
No records found.

10
EBI-438041
 logo
Rpl11
60S ribosomal protein L11
Rattus norvegicus (Rat)
Organism Details

Accession: EBI-937

Name: rat

Description: Rattus norvegicus (Rat)

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference
so
SO:0000358
-
see-also


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: 60S ribosomal protein L11

Participant: 60S ribosomal protein L11

Accession: EBI-26438089

Name: EBI-438041

P
Participant: 60S ribosomal protein L11

Participant: 60S ribosomal protein L11

Accession: EBI-26438089

Name: EBI-438041

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: 60S ribosomal protein L11

Participant: 60S ribosomal protein L11

Accession: EBI-26438089

Name: EBI-438041

Stoichiometry: 0.0

F
Participant: 60S ribosomal protein L11

Participant: 60S ribosomal protein L11

Accession: EBI-26438089

Name: EBI-438041

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: 60S ribosomal protein L11

Participant: 60S ribosomal protein L11

Accession: EBI-26438089

Name: EBI-438041

Confidences:

Type
Value
No records found.

11
EBI-917471
 logo
Rpl13
60S ribosomal protein L13
Rattus norvegicus (Rat)
Organism Details

Accession: EBI-937

Name: rat

Description: Rattus norvegicus (Rat)

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference
so
SO:0000358
-
see-also


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: 60S ribosomal protein L13

Participant: 60S ribosomal protein L13

Accession: EBI-26438090

Name: EBI-917471

P
Participant: 60S ribosomal protein L13

Participant: 60S ribosomal protein L13

Accession: EBI-26438090

Name: EBI-917471

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: 60S ribosomal protein L13

Participant: 60S ribosomal protein L13

Accession: EBI-26438090

Name: EBI-917471

Stoichiometry: 0.0

F
Participant: 60S ribosomal protein L13

Participant: 60S ribosomal protein L13

Accession: EBI-26438090

Name: EBI-917471

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: 60S ribosomal protein L13

Participant: 60S ribosomal protein L13

Accession: EBI-26438090

Name: EBI-917471

Confidences:

Type
Value
No records found.

12
EBI-917707
 logo
60S ribosomal protein L1
Rpl4
Rpl1
60S ribosomal protein L4
Rattus norvegicus (Rat)
Organism Details

Accession: EBI-937

Name: rat

Description: Rattus norvegicus (Rat)

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference
so
SO:0000358
-
see-also


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: 60S ribosomal protein L4

Participant: 60S ribosomal protein L4

Accession: EBI-26438091

Name: EBI-917707

P
Participant: 60S ribosomal protein L4

Participant: 60S ribosomal protein L4

Accession: EBI-26438091

Name: EBI-917707

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: 60S ribosomal protein L4

Participant: 60S ribosomal protein L4

Accession: EBI-26438091

Name: EBI-917707

Stoichiometry: 0.0

F
Participant: 60S ribosomal protein L4

Participant: 60S ribosomal protein L4

Accession: EBI-26438091

Name: EBI-917707

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: 60S ribosomal protein L4

Participant: 60S ribosomal protein L4

Accession: EBI-26438091

Name: EBI-917707

Confidences:

Type
Value
No records found.

13
EBI-916839
 logo
Neoplasm-related protein C140
Rpl6
60S ribosomal protein L6
Rattus norvegicus (Rat)
Organism Details

Accession: EBI-937

Name: rat

Description: Rattus norvegicus (Rat)

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference
so
SO:0000358
-
see-also


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: 60S ribosomal protein L6

Participant: 60S ribosomal protein L6

Accession: EBI-26438092

Name: EBI-916839

P
Participant: 60S ribosomal protein L6

Participant: 60S ribosomal protein L6

Accession: EBI-26438092

Name: EBI-916839

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: 60S ribosomal protein L6

Participant: 60S ribosomal protein L6

Accession: EBI-26438092

Name: EBI-916839

Stoichiometry: 0.0

F
Participant: 60S ribosomal protein L6

Participant: 60S ribosomal protein L6

Accession: EBI-26438092

Name: EBI-916839

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: 60S ribosomal protein L6

Participant: 60S ribosomal protein L6

Accession: EBI-26438092

Name: EBI-916839

Confidences:

Type
Value
No records found.

14
EBI-6986503
 logo
Actr3
Arp3
Actin-like protein 3
Actin-related protein 3
Rattus norvegicus (Rat)
Organism Details

Accession: EBI-937

Name: rat

Description: Rattus norvegicus (Rat)

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference
so
SO:0000358
-
see-also


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Actin-related protein 3

Participant: Actin-related protein 3

Accession: EBI-26438093

Name: EBI-6986503

P
Participant: Actin-related protein 3

Participant: Actin-related protein 3

Accession: EBI-26438093

Name: EBI-6986503

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Actin-related protein 3

Participant: Actin-related protein 3

Accession: EBI-26438093

Name: EBI-6986503

Stoichiometry: 0.0

F
Participant: Actin-related protein 3

Participant: Actin-related protein 3

Accession: EBI-26438093

Name: EBI-6986503

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Actin-related protein 3

Participant: Actin-related protein 3

Accession: EBI-26438093

Name: EBI-6986503

Confidences:

Type
Value
No records found.

15
EBI-21995800
 logo
IP3R-binding protein released with inositol 1,4,5-trisphosphate
Putative adenosylhomocysteinase 2
S-adenosyl-L-homocysteine hydrolase 2

[+2]
S-adenosylhomocysteine hydrolase-like protein 1
Rattus norvegicus (Rat)
Organism Details

Accession: EBI-937

Name: rat

Description: Rattus norvegicus (Rat)

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference
so
SO:0000358
-
see-also


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: S-adenosylhomocysteine hydrolase-like protein 1

Participant: S-adenosylhomocysteine hydrolase-like protein 1

Accession: EBI-26438094

Name: EBI-21995800

P
Participant: S-adenosylhomocysteine hydrolase-like protein 1

Participant: S-adenosylhomocysteine hydrolase-like protein 1

Accession: EBI-26438094

Name: EBI-21995800

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: S-adenosylhomocysteine hydrolase-like protein 1

Participant: S-adenosylhomocysteine hydrolase-like protein 1

Accession: EBI-26438094

Name: EBI-21995800

Stoichiometry: 0.0

F
Participant: S-adenosylhomocysteine hydrolase-like protein 1

Participant: S-adenosylhomocysteine hydrolase-like protein 1

Accession: EBI-26438094

Name: EBI-21995800

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: S-adenosylhomocysteine hydrolase-like protein 1

Participant: S-adenosylhomocysteine hydrolase-like protein 1

Accession: EBI-26438094

Name: EBI-21995800

Confidences:

Type
Value
No records found.

16
EBI-4398879
 logo
Arfgap1
Arf1gap
ADP-ribosylation factor 1 GTPase-activating protein

[+1]
ADP-ribosylation factor GTPase-activating protein 1
Rattus norvegicus (Rat)
Organism Details

Accession: EBI-937

Name: rat

Description: Rattus norvegicus (Rat)

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference
so
SO:0000358
-
see-also


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: ADP-ribosylation factor GTPase-activating protein 1

Participant: ADP-ribosylation factor GTPase-activating protein 1

Accession: EBI-26438095

Name: EBI-4398879

P
Participant: ADP-ribosylation factor GTPase-activating protein 1

Participant: ADP-ribosylation factor GTPase-activating protein 1

Accession: EBI-26438095

Name: EBI-4398879

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: ADP-ribosylation factor GTPase-activating protein 1

Participant: ADP-ribosylation factor GTPase-activating protein 1

Accession: EBI-26438095

Name: EBI-4398879

Stoichiometry: 0.0

F
Participant: ADP-ribosylation factor GTPase-activating protein 1

Participant: ADP-ribosylation factor GTPase-activating protein 1

Accession: EBI-26438095

Name: EBI-4398879

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: ADP-ribosylation factor GTPase-activating protein 1

Participant: ADP-ribosylation factor GTPase-activating protein 1

Accession: EBI-26438095

Name: EBI-4398879

Confidences:

Type
Value
No records found.

17
EBI-915723
 logo
Plasma membrane-associated fatty acid-binding protein
Transaminase A
Glutamate oxaloacetate transaminase 2

[+7]
Aspartate aminotransferase, mitochondrial
Rattus norvegicus (Rat)
Organism Details

Accession: EBI-937

Name: rat

Description: Rattus norvegicus (Rat)

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference
so
SO:0000358
-
see-also


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Aspartate aminotransferase, mitochondrial

Participant: Aspartate aminotransferase, mitochondrial

Accession: EBI-26438096

Name: EBI-915723

P
Participant: Aspartate aminotransferase, mitochondrial

Participant: Aspartate aminotransferase, mitochondrial

Accession: EBI-26438096

Name: EBI-915723

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Aspartate aminotransferase, mitochondrial

Participant: Aspartate aminotransferase, mitochondrial

Accession: EBI-26438096

Name: EBI-915723

Stoichiometry: 0.0

F
Participant: Aspartate aminotransferase, mitochondrial

Participant: Aspartate aminotransferase, mitochondrial

Accession: EBI-26438096

Name: EBI-915723

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Aspartate aminotransferase, mitochondrial

Participant: Aspartate aminotransferase, mitochondrial

Accession: EBI-26438096

Name: EBI-915723

Confidences:

Type
Value
No records found.

18
EBI-916576
 logo
Dars1
Aspartyl-tRNA synthetase
Dars

[+1]
Aspartate--tRNA ligase, cytoplasmic
Rattus norvegicus (Rat)
Organism Details

Accession: EBI-937

Name: rat

Description: Rattus norvegicus (Rat)

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference
so
SO:0000358
-
see-also


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Aspartate--tRNA ligase, cytoplasmic

Participant: Aspartate--tRNA ligase, cytoplasmic

Accession: EBI-26438097

Name: EBI-916576

P
Participant: Aspartate--tRNA ligase, cytoplasmic

Participant: Aspartate--tRNA ligase, cytoplasmic

Accession: EBI-26438097

Name: EBI-916576

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Aspartate--tRNA ligase, cytoplasmic

Participant: Aspartate--tRNA ligase, cytoplasmic

Accession: EBI-26438097

Name: EBI-916576

Stoichiometry: 0.0

F
Participant: Aspartate--tRNA ligase, cytoplasmic

Participant: Aspartate--tRNA ligase, cytoplasmic

Accession: EBI-26438097

Name: EBI-916576

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Aspartate--tRNA ligase, cytoplasmic

Participant: Aspartate--tRNA ligase, cytoplasmic

Accession: EBI-26438097

Name: EBI-916576

Confidences:

Type
Value
No records found.

19
EBI-10768817
 logo
AICAR transformylase/inosine monophosphate cyclohydrolase
Atic
Purh
Bifunctional purine biosynthesis protein ATIC
Rattus norvegicus (Rat)
Organism Details

Accession: EBI-937

Name: rat

Description: Rattus norvegicus (Rat)

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference
so
SO:0000358
-
see-also


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Bifunctional purine biosynthesis protein ATIC

Participant: Bifunctional purine biosynthesis protein ATIC

Accession: EBI-26438098

Name: EBI-10768817

P
Participant: Bifunctional purine biosynthesis protein ATIC

Participant: Bifunctional purine biosynthesis protein ATIC

Accession: EBI-26438098

Name: EBI-10768817

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Bifunctional purine biosynthesis protein ATIC

Participant: Bifunctional purine biosynthesis protein ATIC

Accession: EBI-26438098

Name: EBI-10768817

Stoichiometry: 0.0

F
Participant: Bifunctional purine biosynthesis protein ATIC

Participant: Bifunctional purine biosynthesis protein ATIC

Accession: EBI-26438098

Name: EBI-10768817

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Bifunctional purine biosynthesis protein ATIC

Participant: Bifunctional purine biosynthesis protein ATIC

Accession: EBI-26438098

Name: EBI-10768817

Confidences:

Type
Value
No records found.

20
EBI-1040438
 logo
Capn2
Calpain-2 large subunit
Calcium-activated neutral proteinase 2

[+2]
Calpain-2 catalytic subunit
Rattus norvegicus (Rat)
Organism Details

Accession: EBI-937

Name: rat

Description: Rattus norvegicus (Rat)

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference
so
SO:0000358
-
see-also


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Calpain-2 catalytic subunit

Participant: Calpain-2 catalytic subunit

Accession: EBI-26438099

Name: EBI-1040438

P
Participant: Calpain-2 catalytic subunit

Participant: Calpain-2 catalytic subunit

Accession: EBI-26438099

Name: EBI-1040438

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Calpain-2 catalytic subunit

Participant: Calpain-2 catalytic subunit

Accession: EBI-26438099

Name: EBI-1040438

Stoichiometry: 0.0

F
Participant: Calpain-2 catalytic subunit

Participant: Calpain-2 catalytic subunit

Accession: EBI-26438099

Name: EBI-1040438

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Calpain-2 catalytic subunit

Participant: Calpain-2 catalytic subunit

Accession: EBI-26438099

Name: EBI-1040438

Confidences:

Type
Value
No records found.